mRNA_H-akashiwo_Contig122.14.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: A0A7S3XY60_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY60_HETAK) HSP 1 Score: 178 bits (451), Expect = 7.250e-49 Identity = 78/127 (61.42%), Postives = 101/127 (79.53%), Query Frame = 3
Query: 84 FTHLDDETNAFLLRTMLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLTNPNWDATFHQNMD-CYGHRANDVLPWQGFQGEEGEASRQYTNQDLMQVFAPSNPSLPFIHDSLDFSYCS 461
F ++D N FL+R MLK++C GGLSPM+SPL ++ADPLFAA HSL++RHWSYLRL NP+WDATF++ CYG A+DV+ WQGF GEEG+ YT Q+L+ +F+PSN +LP++HDSLDFSYCS
Sbjct: 545 FKNVDSIKNEFLMRAMLKILCSAGGLSPMSSPLGSSADPLFAATHSLYNRHWSYLRLANPDWDATFYEGTQTCYGFNADDVMVWQGFLGEEGDDLHFYTQQELLDIFSPSNAALPYMHDSLDFSYCS 671
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: A0A7S3XK93_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK93_HETAK) HSP 1 Score: 144 bits (363), Expect = 8.440e-41 Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 3
Query: 84 FTHLDDETNAFLLRTMLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLTNPNWDATFHQNMDCYGHRANDVLPWQGFQGEEGEASRQYTNQDLMQ-VFAPSNPSLPFIHDSLDFSYC 458
F + E + L R +++L CGPGGL MA+ A+ DPLF HS FHRHWS LRL +WD TF ++MDCYGHRA+DV+PW+GF GEE +YT Q+L+ V P+NP+LPFIHDSLDFS C
Sbjct: 10 FAGVGAEEDHRLKRALVRLACGPGGLGTMATNSAS--DPLFVLVHSYFHRHWSALRLARRDWDTTFVEDMDCYGHRASDVMPWEGFLGEE--TPYRYTQQELVSSVLDPANPALPFIHDSLDFSSC 131
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: A0A7S2CT26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CT26_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.770e-17 Identity = 46/132 (34.85%), Postives = 84/132 (63.64%), Query Frame = 3
Query: 84 FTHLDDETNAFLLRTMLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLTNPNWDATFH----QNMDCYG-HRANDVLPWQGF-QGEEGEASRQYTNQDLMQVFAPSNPSLPFIHDSLDFSYCS 461
F ++ ++ N+ LL +L +C PG + +PLAAT DPLF HS + R W+Y+RL+ P++D+ + ++ +C G + +D LP++ F GE+G+ + Y+N++L+ +F P NP LP+++ +S+C+
Sbjct: 174 FVNMTEDENSELLVFLLMAICHPGKMGQYGTPLAATNDPLFWPTHSSWGRLWAYVRLS-PDFDSFNNSWQNESPNCQGMYELHDTLPFKNFLPGEDGD--KFYSNKELIDLFDPKNPKLPYMYSGFQWSHCA 302
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: A0A6V1TY89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TY89_HETAK) HSP 1 Score: 87.0 bits (214), Expect = 2.150e-16 Identity = 44/127 (34.65%), Postives = 75/127 (59.06%), Query Frame = 3
Query: 84 FTHLDDETNAFLLRTMLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLT-NPNWDATFH-QNMDCYGHRANDVLPWQ--GFQGEEGEASRQYTNQDLMQVFAPSNPSLPFIHDSLDFS 452
F D+ + L R +LK C +SP A+PL ++ADP+F HS + ++++ + LT P++D ++ + DC+GH D W G + + G + + N+++M+ F PSNP LP++HD L+FS
Sbjct: 412 FKEADESEDKALKRFLLKQACTASPISPFATPLGSSADPMFFPIHSYWMKYFARMALTATPDFDWSWDTRETDCWGHGEWDAPGWTDAGLRADGGGSGLRMKNREIMEFFNPSNPRLPYVHDHLEFS 538
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: A0A7S2BXX5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXX5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.330e-15 Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 3
Query: 84 FTHLDDETNAFLLRTMLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRL----TNPNWDATFHQNMDCYGHRANDVLPWQGFQGEEGEASRQYTNQDLMQVFAPSNPSLPFIHDSLDFSYCS*IILN 476
FT++ + N +L C PG + M++ AA DPLF H LF R W+Y+RL + N++ T+ + C G D++PW+ +EG + + YTN+DL +F P+N L ++++ D+ +CS I N
Sbjct: 394 FTNMTSDENREFFVFLLNYACNPGKMGAMSTGAAAN-DPLFWPIHPLFDRLWAYIRLDVDGSFSNFNHTWVDDASCQGRSYEDIMPWKDLL-DEG-SGKFYTNEDLYDLFDPTNEKLTYVYEHFDWEHCSSFIQN 525
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: F0Y8X2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8X2_AURAN) HSP 1 Score: 72.8 bits (177), Expect = 2.050e-11 Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 3
Query: 129 MLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLTNPN------------------WDATFHQNMD----CYGHRANDVLPWQGFQGEEGEASRQYTNQDLMQVFAPSNPSLPF 428
+ KLV P ++P A+PLAA+ DPLF H+ + R W Y++L +P+ WD H ++ C+G + LP+ F GE G + YTN +LMQ+F P+NP LPF
Sbjct: 366 LAKLVLHPAKVAPYATPLAASNDPLFWVTHNAWERVWHYVQL-HPSTQYGNALYADSAERLKQYWDVN-HAGLEPYRVCWGRYWDAKLPFSDFLGE-GNHGQDYTNGELMQIFQPTNPDLPF 484
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Match: A0A7S2FUY7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUY7_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 5.000e-7 Identity = 30/119 (25.21%), Postives = 63/119 (52.94%), Query Frame = 3
Query: 117 LLRTMLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLTNPNWDATFHQNMDCYGHRA----NDVLPWQGFQGEEGEASRQY-TNQDLMQVFAPSNPSLPFIHDSLDFSYC 458
++R L++ S +SPL + DP+F H+ + ++W+Y+RL ++++++ +++ + ++V+P G Y TN++L+++F PS P LP+I D + C
Sbjct: 321 IIRLALRIWAQIPKFSQFSSPLGSANDPIFWPIHTSYEKNWNYMRLKPGSFNSSWGNSLETMKVKGWDFDDEVMPCDDAYGIRRRPIGSYFTNRELVELFDPSRPELPYIFDDFGYEQC 439 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig122.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig122.14.1 >prot_H-akashiwo_Contig122.14.1 ID=prot_H-akashiwo_Contig122.14.1|Name=mRNA_H-akashiwo_Contig122.14.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=112bp MLKLVCGPGGLSPMASPLAATADPLFAAAHSLFHRHWSYLRLTNPNWDATback to top mRNA from alignment at H-akashiwo_Contig122:1038254..1038869+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig122.14.1 ID=mRNA_H-akashiwo_Contig122.14.1|Name=mRNA_H-akashiwo_Contig122.14.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=616bp|location=Sequence derived from alignment at H-akashiwo_Contig122:1038254..1038869+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig122:1038254..1038869+ >mRNA_H-akashiwo_Contig122.14.1 ID=mRNA_H-akashiwo_Contig122.14.1|Name=mRNA_H-akashiwo_Contig122.14.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=336bp|location=Sequence derived from alignment at H-akashiwo_Contig122:1038254..1038869+ (Heterosigma akashiwo CCMP452)back to top |