mRNA_H-akashiwo_Contig121.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig121.9.1
Unique NamemRNA_H-akashiwo_Contig121.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: A0A7S3Y2B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B0_HETAK)

HSP 1 Score: 770 bits (1988), Expect = 3.770e-281
Identity = 384/386 (99.48%), Postives = 385/386 (99.74%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPLKA 1161
            MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKP HLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRV+FSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPLKA
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPTHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVSFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPLKA 386          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: A0A7S2V865_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V865_9STRA)

HSP 1 Score: 639 bits (1647), Expect = 3.830e-229
Identity = 310/384 (80.73%), Postives = 348/384 (90.62%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            MSHRKFEAPRHGSLGFLPKKRTK H G+IR+FP+DDASKP HLTAFMAYKAGMTHIVRE+++PGSK +KKEVVEAVT++EAPPM+ VG+VGYVETP GLR+LTTVWA HL E  KRRFYKNWYKSK+KAFTKYAKKY +  + D+  EL R+KKYCQV+RVIAHTQ +K+ LR KKAHIMEIQVNGGSV DKVDF +NLFEK++ VDSVFA+DE ID +GASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIG WHP+RV ++VAR+GQHGYHHRTE+NKKIY+IGKKGD G+C+TE DLTVKSITPMGGFPHYGE+NEDWLMLKG VVGCKKR +TLRKSLLTLSKR +LE I L+FVDTSSK+GHGRFQ AEEK KFMGPL
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKHHHGRIRTFPKDDASKPPHLTAFMAYKAGMTHIVREVERPGSKLHKKEVVEAVTIMEAPPMMVVGLVGYVETPRGLRSLTTVWAEHLSEECKRRFYKNWYKSKRKAFTKYAKKYTDSPA-DLDFELKRMKKYCQVIRVIAHTQIRKVKLRQKKAHIMEIQVNGGSVEDKVDFGKNLFEKEVSVDSVFAQDEVIDTIGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGPWHPARVPYTVARTGQHGYHHRTEVNKKIYRIGKKGDPGSCSTETDLTVKSITPMGGFPHYGEVNEDWLMLKGAVVGCKKRPVTLRKSLLTLSKRRYLEKIELNFVDTSSKLGHGRFQDAEEKAKFMGPL 383          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: A0A835YUS8_9STRA (Ribosomal protein L3 superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS8_9STRA)

HSP 1 Score: 625 bits (1611), Expect = 1.250e-223
Identity = 307/384 (79.95%), Postives = 343/384 (89.32%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            MSHRKFEAPR GSLGFLPKKRTKKH GKIRSFPRDDASKP  LTAFMAYKAGMTH+VRE+++PGSK +KKE VEAVT+LE PPMV VGVVGYVETP GLRTLTTVWA HL + ++RRFYKNWYKSKKKAFT+YAKK  E  + ++  EL RIKKYCQVVRVIAHTQ   + LR+KKAH+MEIQVNGGSV+DKV FA+ LFEKQ+ VDSVFAKDECID+LGA+KGHGTEGVVTRWGVTRL RKTHRGLRKVACIG+WHP+RV+FSVAR+GQHGYHHRTE+NKKIY++GKKGDE  C+TEADLTVK ITPMGGFPHYGE+NEDWLM+KG VVG KKR +TLRKSL TLS R ++E+I L F+DTSSK GHGRFQTAEEK KFMGPL
Sbjct:    1 MSHRKFEAPRRGSLGFLPKKRTKKHFGKIRSFPRDDASKPCQLTAFMAYKAGMTHVVREVERPGSKLHKKETVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTRYAKKCAESPA-EVEKELERIKKYCQVVRVIAHTQVGLVKLRVKKAHVMEIQVNGGSVADKVAFARGLFEKQVPVDSVFAKDECIDILGATKGHGTEGVVTRWGVTRLARKTHRGLRKVACIGSWHPARVSFSVARAGQHGYHHRTEINKKIYRMGKKGDESACSTEADLTVKGITPMGGFPHYGEVNEDWLMIKGGVVGPKKRCVTLRKSLTTLSARRYMEAIDLKFIDTSSKYGHGRFQTAEEKDKFMGPL 383          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: A0A6H5JYN6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYN6_9PHAE)

HSP 1 Score: 617 bits (1591), Expect = 4.010e-220
Identity = 303/385 (78.70%), Postives = 341/385 (88.57%), Query Frame = 1
Query:    1 TMSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            TMSHRKFEAPR+GSLGFLPKKRTKKHRG IRSFP+DDA+K  HLTAFMAYKAGMTHI RE+D+PGSK +KKEVVEAVT+LE PP+V VGVVGYVETP GLRTLTTVWA HL +  KRRFYK+WY SKKKAFT+YAKK+ +    +I AEL RIK+Y QVVRVIAHTQ   + LR KKAHI EIQVNGG V+ KVDFA+ LFE+++ VD+VFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP+RV+FSVAR+GQHGYHHRTE+NKKIY+IGKKGD  + +TEADLTVK ITP+GGFPHYGEINEDWLMLKGCV+GCKKR +TLRKSL++ S+R HLE + L F+DTSSK GHGRFQT EEK KF+GPL
Sbjct:   30 TMSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYKHWYTSKKKAFTRYAKKFADAPQ-EIDAELGRIKQYAQVVRVIAHTQIGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVELKFIDTSSKYGHGRFQTKEEKDKFLGPL 413          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: F0WE57_9STRA (60S ribosomal protein L3 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WE57_9STRA)

HSP 1 Score: 602 bits (1552), Expect = 1.070e-214
Identity = 294/384 (76.56%), Postives = 334/384 (86.98%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            M HRKFEAPRHG LGFLPKKRTK H+G+IR FPRDD +K  HLTAF+A+KAGMTHI+RE+++PGSK +KKE+VEAV++LE PPMV VGVVGY+ETP GLR+LTTVWA HL E VKRRFYKNWYKSK+KAFTKYAKKY    S DI  EL RIKKYCQVVRV+AH QPKKL+LR+KKAHIMEIQ+NGGSV DKVDFA++LFEKQ+ V +VF +DE ID+ GA+KGHG EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRV+++V R+GQHGYHHRTE+NKKIY+IG  GD  +C TE DLT KSITPMGGFPHYG INEDWLM+KG VVG KKR +TLRKSLL  +KR+ LE I L F+DTSSK GHGRFQTAEEK K+MGPL
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHQGRIRKFPRDDCNKAPHLTAFLAHKAGMTHIMREVNQPGSKLHKKEIVEAVSILETPPMVIVGVVGYLETPRGLRSLTTVWAEHLSEEVKRRFYKNWYKSKRKAFTKYAKKY--ANSSDIERELNRIKKYCQVVRVLAHDQPKKLHLRIKKAHIMEIQINGGSVPDKVDFAKSLFEKQVPVSAVFTQDELIDICGATKGHGIEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVSYTVPRAGQHGYHHRTEINKKIYRIGAAGDAKSCQTEQDLTEKSITPMGGFPHYGIINEDWLMIKGAVVGVKKRPITLRKSLLLHTKRAALEEIKLKFIDTSSKFGHGRFQTAEEKAKWMGPL 382          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: A0A8K1FED4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED4_PYTOL)

HSP 1 Score: 600 bits (1548), Expect = 4.530e-214
Identity = 292/384 (76.04%), Postives = 335/384 (87.24%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            M HRKFEAPRHG LGFLPKKRTK HRG++R FPRDDASK  HLTAFM YKAGMTHIVRE+D+PGSK +KKEVVEAVT+LE PPMV VGVVGY+ETP GLRTLTTV+A HL+E VKRRFYKNWY+SK+KAFTKY+KKY +    +I  EL RIKKYCQVVRV+ HTQ +K+NLR KKAH++E+QVNGGSV++KVDFA++LFEKQ+ V +VFA+DE IDV+G +KGHG EGV+TRWGV+RLPRKTHRGLRKVACIGAWHPSRV FSVAR+GQHGYHHRTE+NKKIY+IG  GD  +C TEADLT KSITP+GGFPHYG + EDW+M+KG VVG KKRV+TLRKSLL  +KRS LE I L F+DTSSK GHGRFQT EEK KF+GPL
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIVREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLNEEVKRRFYKNWYRSKRKAFTKYSKKY-QTNPAEIENELNRIKKYCQVVRVLTHTQIRKVNLRQKKAHLIEVQVNGGSVAEKVDFAKSLFEKQVPVSAVFAQDEMIDVIGVTKGHGFEGVITRWGVSRLPRKTHRGLRKVACIGAWHPSRVRFSVARAGQHGYHHRTEINKKIYRIGAAGDAKSCMTEADLTEKSITPLGGFPHYGVVKEDWVMIKGAVVGVKKRVITLRKSLLVHTKRSALEEIKLKFIDTSSKFGHGRFQTVEEKAKFLGPL 383          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: A0A7S2SCP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCP9_9STRA)

HSP 1 Score: 600 bits (1546), Expect = 1.220e-213
Identity = 289/385 (75.06%), Postives = 335/385 (87.01%), Query Frame = 1
Query:    1 TMSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            TMSHRKFEAPRHGSLGFLPKKRTK HRG++RSFP+DDA+KP HLTAFMAYKAGMTH+VRE ++PGSK + KEVV+AVT+LE PPMV VGVVGYV T +GLRTLTT WA HL + V+RRFYKNWYKSK+KAF+KY K++ E  + +  A+L R+K  CQV+RVIAHTQ  K+ LR KKAHIMEIQVNGGS++DKVDFA  LFEKQ+ V+ VFAKDE IDVLGA+KGHGTEGV+ RWG+TRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKI++IGKK D+ + +T+ DLT KSITP+GGFPHYG +NEDW+M++GC VG KKRV+T+RKSL+  S R HLE I L F+DTSSK GHGRFQTAEEK KF+GPL
Sbjct:    9 TMSHRKFEAPRHGSLGFLPKKRTKHHRGRVRSFPKDDATKPCHLTAFMAYKAGMTHVVREPERPGSKVHHKEVVDAVTILETPPMVVVGVVGYVATATGLRTLTTAWAGHLSDEVRRRFYKNWYKSKQKAFSKYTKQFKESPA-ETEAQLQRMKDQCQVIRVIAHTQIAKIGLRQKKAHIMEIQVNGGSIADKVDFAHGLFEKQVTVEDVFAKDENIDVLGATKGHGTEGVIARWGITRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIFRIGKKDDKTSASTDNDLTEKSITPLGGFPHYGVVNEDWIMIRGCCVGVKKRVVTIRKSLMAHSSRKHLEEINLKFIDTSSKFGHGRFQTAEEKDKFLGPL 392          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: H6WB96_VAULI (Ribosomal protein L3 superfamily protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB96_VAULI)

HSP 1 Score: 594 bits (1531), Expect = 2.180e-211
Identity = 290/384 (75.52%), Postives = 336/384 (87.50%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            MSHRKFEAPR GSLGFLPKKRTKKH GKIRSFP DD SK  HLTAFMAYKAGMTHIVRE+++PGSK +KKE VE VT+LE PPMV VGVVGY ETP+GL+T+ +VWA HL +  +RR YKNW+ SKKKAFT YAKK+ E    +I  +L +IKK+CQVVRVIAHTQ   + LR+KKAHIMEIQVNGG+V +KVDFA+ LFE+ + + SVF+KDECIDVLGA+KGHGT+GVV RWGVTRL RKTHRGLRKVACIG+WHP+RVAFSVAR+GQHGYHHRTE+NKKIY+IG+KGDEG+CTTEADLTVKSITPMGGFPHYGEINEDW+M+KG +VG KKR +TLRKSLL+LS R ++ESI L F+DTSSK GHGRFQT++E+ KFMGPL
Sbjct:    1 MSHRKFEAPRKGSLGFLPKKRTKKHFGKIRSFPHDDPSKECHLTAFMAYKAGMTHIVREVERPGSKLHKKETVEPVTILECPPMVVVGVVGYKETPNGLKTVVSVWAGHLSDECRRRMYKNWHSSKKKAFTAYAKKFAEKPE-EIERDLKKIKKHCQVVRVIAHTQVGLVKLRVKKAHIMEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTRLARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEINKKIYRIGQKGDEGSCTTEADLTVKSITPMGGFPHYGEINEDWIMVKGGLVGTKKRCVTLRKSLLSLSSRRYMESIDLKFIDTSSKYGHGRFQTSDERDKFMGPL 383          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: H3G9A1_PHYRM (Uncharacterized protein n=29 Tax=Oomycota TaxID=4762 RepID=H3G9A1_PHYRM)

HSP 1 Score: 590 bits (1520), Expect = 1.190e-209
Identity = 286/379 (75.46%), Postives = 327/379 (86.28%), Query Frame = 1
Query:    4 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLK 1140
            M HRKFEAPRHG LGFLPKKRTK HRG++R FPRDDASK  HLTAFM +KAGMTHIVRE+D+PGSK +KKE+VE V+++E PPMV VGVVGY+ETP GLRTLTTV+A HL E +KRRFYKNWYKSK+KAFTKYAKKY +    DI  EL RIKKYCQVVRV+AHTQ +K+ LR KKAH++E+QVNGGSV+DKVDFA++LFEKQ+ V +VFAKDE IDV+G +KGHG EGV+TRWGVTRLPRKTHRGLRKVACIGAWHPSRV F+V R+GQHGYHHRTE+NKKIY++G  GD+ +C TE DLT K ITP+GGFPHYG INEDWLM+KG +VG KKR LTLRKSLL  +KRS LE I L F+DTSSK GHGRFQTAEEK K
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGFKAGMTHIVREVDRPGSKVHKKEIVEPVSIVETPPMVVVGVVGYLETPRGLRTLTTVFAEHLSEEIKRRFYKNWYKSKRKAFTKYAKKY-QTAPADIENELNRIKKYCQVVRVLAHTQVRKVKLRQKKAHLLEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGIEGVITRWGVTRLPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRVGAAGDKKSCMTEQDLTEKDITPLGGFPHYGVINEDWLMIKGAIVGTKKRALTLRKSLLVHTKRSALEEINLKFIDTSSKFGHGRFQTAEEKAK 378          
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Match: B5Y405_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y405_PHATC)

HSP 1 Score: 582 bits (1500), Expect = 9.160e-207
Identity = 282/383 (73.63%), Postives = 327/383 (85.38%), Query Frame = 1
Query:    7 SHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEADLTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRSHLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPL 1155
            SHRKFEAPRHGSLGFLPKKRTK H G+IRSFPRDDA++  HLTAF  YKAGMTH+VR +D+PG+  +K+EVV+AV+++E PPMV VGVVGYVETPSGLRTLTTV+  HL E  KRR YKNWY SKKKA+TKYA KY + G  DI  EL RIKK+C VVRVIAH+Q KKLNLR+KKAHIMEIQVNGG  + KVDFA+NLFEK++ VDS+FAKDE IDVLG ++GHG EGV TRWGV+RLPRKTHRGLRKVACIG+WHP+RV+ +V R+GQ+GY HRTEMNKK+Y++GKKGDE +C T+ADLT KSITPMGGF HYGE+ EDWLMLKG +VG KKR L LRKSL+  S R HLE I + F+DTSSK+GHGRFQTAEEK KF+GPL
Sbjct:    1 SHRKFEAPRHGSLGFLPKKRTKYHSGRIRSFPRDDAAEQPHLTAFRGYKAGMTHVVRGVDRPGALMHKREVVDAVSIVETPPMVVVGVVGYVETPSGLRTLTTVFTEHLSEEFKRRCYKNWYNSKKKAYTKYALKYQKDGGKDIENELERIKKFCSVVRVIAHSQVKKLNLRIKKAHIMEIQVNGGDTAAKVDFAKNLFEKEVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRLPRKTHRGLRKVACIGSWHPARVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEASCQTDADLTKKSITPMGGFVHYGEVKEDWLMLKGAIVGVKKRPLILRKSLMKHSSRKHLEKIDIKFIDTSSKLGHGRFQTAEEKAKFLGPL 383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig121.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y2B0_HETAK3.770e-28199.48Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V865_9STRA3.830e-22980.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YUS8_9STRA1.250e-22379.95Ribosomal protein L3 superfamily protein n=1 Tax=T... [more]
A0A6H5JYN6_9PHAE4.010e-22078.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0WE57_9STRA1.070e-21476.5660S ribosomal protein L3 putative n=2 Tax=Albugo T... [more]
A0A8K1FED4_PYTOL4.530e-21476.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2SCP9_9STRA1.220e-21375.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H6WB96_VAULI2.180e-21175.52Ribosomal protein L3 superfamily protein n=1 Tax=V... [more]
H3G9A1_PHYRM1.190e-20975.46Uncharacterized protein n=29 Tax=Oomycota TaxID=47... [more]
B5Y405_PHATC9.160e-20773.63Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig121contigH-akashiwo_Contig121:590524..591687 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FHR5
Preferred nameRPL3
PFAMsRibosomal_L3
Model size1164
Max annot lvl2759|Eukaryota
KEGG koko:K02925
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.87e-220
EggNOG OGsCOG0087@1|root,KOG0746@2759|Eukaryota
Descriptionribosomal large subunit assembly
Cds size1161
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387121.9038613-UTR-H-akashiwo_Contig121:590523..5905261681387121.9038613-UTR-H-akashiwo_Contig121:590523..590526Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig121 590524..590526 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387121.9143608-CDS-H-akashiwo_Contig121:590526..5916871681387121.9143608-CDS-H-akashiwo_Contig121:590526..591687Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig121 590527..591687 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig121.9.1prot_H-akashiwo_Contig121.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig121 590527..591687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig121.9.1

>prot_H-akashiwo_Contig121.9.1 ID=prot_H-akashiwo_Contig121.9.1|Name=mRNA_H-akashiwo_Contig121.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=387bp
MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPAHLTAFMAYK
AGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLR
TLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELA
RIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLF
EKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKV
ACIGAWHPSRVAFSVARSGQHGYHHRTEMNKKIYKIGKKGDEGTCTTEAD
LTVKSITPMGGFPHYGEINEDWLMLKGCVVGCKKRVLTLRKSLLTLSKRS
HLESITLSFVDTSSKMGHGRFQTAEEKLKFMGPLKA*
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mRNA from alignment at H-akashiwo_Contig121:590524..591687+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig121.9.1 ID=mRNA_H-akashiwo_Contig121.9.1|Name=mRNA_H-akashiwo_Contig121.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1164bp|location=Sequence derived from alignment at H-akashiwo_Contig121:590524..591687+ (Heterosigma akashiwo CCMP452)
ACCATGTCTCATCGTAAGTTCGAAGCTCCCCGCCATGGCTCTCTTGGGTT TCTGCCCAAGAAGCGCACCAAGAAGCATAGAGGTAAGATTCGCTCTTTCC CTAGGGATGATGCGTCCAAGCCTGCCCATCTGACCGCCTTCATGGCGTAC AAGGCCGGCATGACCCATATCGTGAGAGAGATGGACAAGCCTGGCAGCAA GTACAACAAGAAGGAGGTAGTGGAGGCCGTGACTGTGCTGGAGGCCCCTC CTATGGTAGCTGTCGGTGTAGTTGGTTACGTGGAGACCCCCAGTGGTCTT CGCACCCTCACGACAGTCTGGGCGAACCATTTGGACGAAGCTGTCAAGCG TAGATTCTACAAGAACTGGTACAAGTCCAAGAAGAAGGCTTTCACCAAGT ACGCGAAGAAGTACTACGAGGGGGGATCCGGTGACATTGCTGCTGAGCTT GCTAGAATTAAGAAGTACTGCCAGGTGGTCAGAGTCATCGCCCACACCCA GCCCAAGAAGCTGAATCTTCGCCTGAAGAAGGCCCACATCATGGAGATCC AGGTGAACGGTGGGTCTGTCTCTGACAAGGTTGATTTCGCTCAGAACCTG TTCGAGAAACAGATCGAGGTCGACTCTGTGTTCGCGAAGGATGAATGCAT CGATGTGCTGGGTGCCAGCAAGGGTCACGGCACTGAGGGTGTGGTCACCC GTTGGGGCGTGACCAGACTTCCTCGCAAGACCCACAGAGGTCTTCGCAAG GTCGCCTGTATCGGTGCCTGGCATCCTTCTCGCGTTGCCTTCAGTGTGGC CCGCTCTGGTCAGCACGGTTACCACCACCGCACTGAGATGAACAAGAAGA TTTACAAGATCGGCAAGAAGGGTGACGAGGGGACCTGCACGACCGAGGCT GATCTGACTGTCAAGTCCATCACCCCAATGGGTGGTTTCCCCCATTATGG TGAGATCAATGAGGACTGGCTCATGCTCAAGGGATGTGTGGTTGGCTGCA AGAAGCGTGTCCTGACTCTCAGAAAATCTCTGCTCACCCTCTCCAAGAGA TCTCACCTGGAGTCCATCACCCTCTCCTTCGTGGACACCTCTTCCAAGAT GGGCCACGGCCGCTTCCAGACCGCCGAGGAGAAGCTCAAGTTCATGGGCC CCCTCAAGGCCTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig121:590524..591687+

>mRNA_H-akashiwo_Contig121.9.1 ID=mRNA_H-akashiwo_Contig121.9.1|Name=mRNA_H-akashiwo_Contig121.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1161bp|location=Sequence derived from alignment at H-akashiwo_Contig121:590524..591687+ (Heterosigma akashiwo CCMP452)
ATGTCTCATCGTAAGTTCGAAGCTCCCCGCCATGGCTCTCTTGGGTTTCT
GCCCAAGAAGCGCACCAAGAAGCATAGAGGTAAGATTCGCTCTTTCCCTA
GGGATGATGCGTCCAAGCCTGCCCATCTGACCGCCTTCATGGCGTACAAG
GCCGGCATGACCCATATCGTGAGAGAGATGGACAAGCCTGGCAGCAAGTA
CAACAAGAAGGAGGTAGTGGAGGCCGTGACTGTGCTGGAGGCCCCTCCTA
TGGTAGCTGTCGGTGTAGTTGGTTACGTGGAGACCCCCAGTGGTCTTCGC
ACCCTCACGACAGTCTGGGCGAACCATTTGGACGAAGCTGTCAAGCGTAG
ATTCTACAAGAACTGGTACAAGTCCAAGAAGAAGGCTTTCACCAAGTACG
CGAAGAAGTACTACGAGGGGGGATCCGGTGACATTGCTGCTGAGCTTGCT
AGAATTAAGAAGTACTGCCAGGTGGTCAGAGTCATCGCCCACACCCAGCC
CAAGAAGCTGAATCTTCGCCTGAAGAAGGCCCACATCATGGAGATCCAGG
TGAACGGTGGGTCTGTCTCTGACAAGGTTGATTTCGCTCAGAACCTGTTC
GAGAAACAGATCGAGGTCGACTCTGTGTTCGCGAAGGATGAATGCATCGA
TGTGCTGGGTGCCAGCAAGGGTCACGGCACTGAGGGTGTGGTCACCCGTT
GGGGCGTGACCAGACTTCCTCGCAAGACCCACAGAGGTCTTCGCAAGGTC
GCCTGTATCGGTGCCTGGCATCCTTCTCGCGTTGCCTTCAGTGTGGCCCG
CTCTGGTCAGCACGGTTACCACCACCGCACTGAGATGAACAAGAAGATTT
ACAAGATCGGCAAGAAGGGTGACGAGGGGACCTGCACGACCGAGGCTGAT
CTGACTGTCAAGTCCATCACCCCAATGGGTGGTTTCCCCCATTATGGTGA
GATCAATGAGGACTGGCTCATGCTCAAGGGATGTGTGGTTGGCTGCAAGA
AGCGTGTCCTGACTCTCAGAAAATCTCTGCTCACCCTCTCCAAGAGATCT
CACCTGGAGTCCATCACCCTCTCCTTCGTGGACACCTCTTCCAAGATGGG
CCACGGCCGCTTCCAGACCGCCGAGGAGAAGCTCAAGTTCATGGGCCCCC
TCAAGGCCTAA
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