mRNA_H-akashiwo_Contig121.6.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A6T5QIA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QIA2_HETAK) HSP 1 Score: 362 bits (928), Expect = 4.970e-123 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 3
Query: 39 MLSKLFLIAFLAVWSVALSFTVRSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAATXXXXXXXXXXXXXXXXXXLAYDVEESA 674
MLSKLFLIAFLAVWSVALSFTVRSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAATXXXXXXXXXXXXXXXXXXLAYDVEESA
Sbjct: 1 MLSKLFLIAFLAVWSVALSFTVRSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAATXXXXXXXXXXXXXXXXXXLAYDVEESA 212
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: K0STH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC) HSP 1 Score: 129 bits (325), Expect = 4.900e-31 Identity = 75/156 (48.08%), Postives = 104/156 (66.67%), Query Frame = 3
Query: 123 GGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAA 590
GGA G +T GK+ V +K LLDSS ++F V + T Q+ LRRSLPEGT V KN+L+ +A EGTE+ +N++ N +FFIE+DI GSVK+W+ FVKD AL E I +GG +EG+ D V+ ++K+PSKIELIT++ A+R+ A
Sbjct: 156 GGAQGGATTLEGKKNTVSAVKELLDSSEMVFTVPASGITVAQVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVNEMLKGANMWFFIEEDIGGSVKSWKKFVKDEALAESHSI--LGGNIEGTNYDTAGVEQISKLPSKIELITQI--ASRIQA 307
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A6V2PHN8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PHN8_9STRA) HSP 1 Score: 123 bits (308), Expect = 8.330e-30 Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 3
Query: 105 RSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
RS GGA G ++ AGK+A V +K LLD S ++F V T Q LLRR+LPEGT V KN L+++A EGT++ ++ N +FF+E+DI GS+KA+ F K+N E V+GGV+EG + D+ V A++K+PSK+ELI ++ A T
Sbjct: 28 RSTRLFGGAQGMATSPAGKQAKVAAVKELLDKSEMVFSVPAGSITVAQTQLLRRALPEGTTMSVVKNTLMQRAIEGTDYQVAGELLKGPNMWFFVEEDIGGSIKAFNAFTKENGKTESH--MVLGGVIEGVVYDSAGVTAISKLPSKLELIAQIAGAINAVPT 188
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: B8BYW1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYW1_THAPS) HSP 1 Score: 122 bits (307), Expect = 1.160e-29 Identity = 72/158 (45.57%), Postives = 100/158 (63.29%), Query Frame = 3
Query: 123 GGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVE-QNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
GGA G +T GK+A V +K LLDSS ++F V + T ++ LRR+LPEGT V KN+L+ +A EGTE+A I D + N +FFIE+DI G+VK W FVK+ LK+ I +GG +EG D VDA++K+PSK+ELI ++ A + T
Sbjct: 33 GGARGGATTLDGKKATVTHVKELLDSSEMVFTVPASGITVSKVQGLRRNLPEGTTVKVVKNKLMARAIEGTEYAPIGDQFLTGANMWFFIEEDIGGTVKTWNQFVKEAGLKDTHSI--LGGNIEGVNYDTKGVDAISKLPSKMELIAQIAGAVKAVPT 188
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A7S4J3C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3C3_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.070e-29 Identity = 68/163 (41.72%), Postives = 97/163 (59.51%), Query Frame = 3
Query: 105 RSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
RS +HMGGA+G +T GK V +K LLD+S +IF V + LR+SLPEGT V KN+L+ +A EGT++ + +++ N +FFIE+DI ++KA+ F KD KE I +GG +EG DA VDA+ K+PSK ELI ++ + T
Sbjct: 32 RSSLHMGGASGVATTLEGKRVKVERIKGLLDTSEMIFTVPAGSMSVSDTQDLRKSLPEGTVMSVVKNKLMARALEGTDYESASEMLSGPNMWFFIEEDIGATIKAYNKFTKDYDKKESHPI--LGGAMEGVNYDAAGVDAIGKLPSKTELIAKIAGGIKAVPT 192
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A7R9ZA11_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZA11_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.530e-27 Identity = 68/163 (41.72%), Postives = 95/163 (58.28%), Query Frame = 3
Query: 105 RSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
RS GGA+GF +T GK+ V +K LLDSS +IF V T + LR+SLPEGT V KN+L+ +A EGT++ +++ N +FFIE+DI S+KA+ F KD KE I +GG +EG D+ VDA+ K+P K ELI ++ + T
Sbjct: 33 RSTELFGGASGFATTLEGKKEKVERVKELLDSSEMIFTVPAGSMTVSETQDLRKSLPEGTVMSVVKNKLMARALEGTDYECASEMLSGPNMWFFIEEDIGASIKAFNKFTKDYGKKESHPI--LGGSMEGVNYDSKGVDAIGKLPGKKELIAKIAGGIKAVPT 193
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: B7G672_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G672_PHATC) HSP 1 Score: 113 bits (283), Expect = 1.520e-26 Identity = 60/158 (37.97%), Postives = 98/158 (62.03%), Query Frame = 3
Query: 120 MGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
MGGA G+ ++ GK+ V ++++LLDSS ++F + T Q LRRS+P GT + KN+L+ +A EGT++A + N +FFIE+DI G++KA+ F+K+ +E I +GGV+EG+ DA V+A+ K+PSK +L ++ + + T
Sbjct: 1 MGGAQGYATSLEGKKNTVTKVQSLLDSSQMVFTIPAGSITVAQTQALRRSMPSGTTVQIVKNKLMARAVEGTDYAVATSLLQGANAWFFIEEDIGGTLKAYNAFLKNFGKRESHPI--LGGVIEGNTYDAAGVEAIGKLPSKQDLYAKIAGSIKAVPT 156
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A7S4EQC8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQC8_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.570e-26 Identity = 66/158 (41.77%), Postives = 92/158 (58.23%), Query Frame = 3
Query: 123 GGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWA-AINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
GG++GF +T GK+ V +K LLD+S +IF V T + LRRS+PEGT V KN L+R+A EGTE+ A + N +FFIE+DI S+KAW F K+ A E I GG++EG+ DA ++A+ K+PSK EL ++ T
Sbjct: 33 GGSSGFATTVEGKKVKVDAVKELLDTSQMIFSVPAGEVTVAESQTLRRSMPEGTTISVVKNTLMRRATEGTEYEEATAPLLKGPNMWFFIEEDIGASIKAWNAFTKEAAKTETHSIN--GGIVEGTNYDAAGIEAIGKLPSKKELYAKIAAGVNAVPT 188
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A7S1E238_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E238_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.410e-26 Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 3
Query: 123 GGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEWAAINDVCVEQNGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAAT 593
GGA G ST GK+ V ++++L+D+S ++F V T Q +LRRSLPEGT V KN L+ +A GT++ ++ + +FFIEDDI S+KA+ F+K+N L E I +GGV+E +L DA+ V + +PSK+EL ++ + + T
Sbjct: 34 GGAGGRASTLEGKKEKVAQIQSLIDTSQMVFTVPAGSITVSQSEILRRSLPEGTTAAVVKNTLMERAVSGTDYETAAELLKGPHMWFFIEDDIGASIKAYNGFIKENDLMESHGI--IGGVIESTLYDADGVKQIGNLPSKLELYAKIAGSIKAVPT 188
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Match: A0A7S0CCA6_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCA6_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.900e-25 Identity = 73/165 (44.24%), Postives = 103/165 (62.42%), Query Frame = 3
Query: 105 RSGIHMGGAAGFKSTKAGKEAVVGELKTLLDSSTVIFGVNTARRTPKQLMLLRRSLPEGTKFMVCKNRLLRKAAEGTEW-AAINDVCVEQ--NGYFFIEDDIQGSVKAWQNFVKDNALKEDEDIRVVGGVLEGSLLDANAVDALAKMPSKIELITRVGVAARLAA 590
RS + MGGA G +T GK VV +KTLL+SS ++F + + K++ LR LPEGT KN+L++KAA GT++ AA+ D + + N +FFI DDI S+K+ + FVK+ KE I +GGV++G LDA V A+ +PSK ELIT + AAR+ A
Sbjct: 31 RSVLKMGGATGRATTLEGKTEVVANVKTLLESSEMVFSMPASGLKVKEMNELRFGLPEGTTAQCVKNKLMQKAAAGTDYEAALTDSSLLKGTNLWFFIRDDIGASIKSHKTFVKEFEKKESHGI--IGGVIDGDTLDALQVVAVGALPSKKELITMI--AARIKA 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig121.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig121.6.1 >prot_H-akashiwo_Contig121.6.1 ID=prot_H-akashiwo_Contig121.6.1|Name=mRNA_H-akashiwo_Contig121.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=213bp MLSKLFLIAFLAVWSVALSFTVRSGIHMGGAAGFKSTKAGKEAVVGELKTback to top mRNA from alignment at H-akashiwo_Contig121:331377..333275+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig121.6.1 ID=mRNA_H-akashiwo_Contig121.6.1|Name=mRNA_H-akashiwo_Contig121.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1899bp|location=Sequence derived from alignment at H-akashiwo_Contig121:331377..333275+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig121:331377..333275+ >mRNA_H-akashiwo_Contig121.6.1 ID=mRNA_H-akashiwo_Contig121.6.1|Name=mRNA_H-akashiwo_Contig121.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=639bp|location=Sequence derived from alignment at H-akashiwo_Contig121:331377..333275+ (Heterosigma akashiwo CCMP452)back to top |