mRNA_H-akashiwo_Contig1208.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1208.9.1
Unique NamemRNA_H-akashiwo_Contig1208.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A7S3YEJ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEJ2_HETAK)

HSP 1 Score: 269 bits (687), Expect = 2.200e-87
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1 
Query:  130 RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPK 
Sbjct:    1 RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKV 137
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: W7TXR8_9STRA (Ribosome biogenesis protein bms1-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXR8_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.450e-75
Identity = 122/176 (69.32%), Postives = 144/176 (81.82%), Query Frame = 1 
Query:   16 ITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECT-NDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            + + V K HR +++GAKA KK  HQKKK G ST RHNPRAFSV+ I +T++N QRNLD+AQQKE+ PLVDRTE +PPP  VVVMGP GCGKS+LIRSLVK YTRQNL+++ GPIT+V  K +RLT FEC  +DL AM+DLAK ADLVLLMVD S+GFEMETFEFLN+LQ HGFPK 
Sbjct:    6 LVQDVHKGHRPRQAGAKAKKKEAHQKKKKGLSTERHNPRAFSVANIKRTQRNTQRNLDRAQQKEHVPLVDRTEALPPPSLVVVMGPKGCGKSTLIRSLVKYYTRQNLSDVLGPITVVAGKAKRLTFFECPGDDLCAMLDLAKTADLVLLMVDGSFGFEMETFEFLNMLQTHGFPKV 181
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: I2CPB3_NANGC (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB3_NANGC)

HSP 1 Score: 235 bits (600), Expect = 2.500e-73
Identity = 122/176 (69.32%), Postives = 144/176 (81.82%), Query Frame = 1 
Query:   16 ITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECT-NDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            + + V K HR +++GAKA KK  HQKKK G ST RHNPRAFSV+ I +T++N QRNLD+AQQKE+ PLVDRTE +PPP  VVVMGP GCGKS+LIRSLVK YTRQNL+++ GPIT+V  K +RLT FEC  +DL AM+DLAK ADLVLLMVD S+GFEMETFEFLN+LQ HGFPK 
Sbjct:    6 LVQDVHKGHRPRQAGAKAKKKEAHQKKKKGLSTERHNPRAFSVANIKRTQRNTQRNLDRAQQKEHVPLVDRTEALPPPSLVVVMGPKGCGKSTLIRSLVKYYTRQNLSDVLGPITVVAGKAKRLTFFECPGDDLCAMLDLAKTADLVLLMVDGSFGFEMETFEFLNMLQTHGFPKV 181
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BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A6H5L2C7_9PHAE (Bms1-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2C7_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 9.290e-67
Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = 1 
Query:    4 EALNITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            +AL++TK  KK HR  KSGAKA+KK     K+ G    RHNPRAFSVSKIGKT+K  QRNLD+AQ+KE  P VDR E++PPPV VVVMGP G GK++LIRSL+KLYT  NL E TGPIT+V  K RR+T  EC +DL  MVDLAK+ADLVLL+VD S+GFEMETFEFLNILQVHGFPK 
Sbjct:    3 DALSLTKDAKKPHRTSKSGAKANKK-----KEKGGKVERHNPRAFSVSKIGKTRKTQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFQECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNILQVHGFPKV 176
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BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A1V9ZFU4_9STRA (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFU4_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.110e-66
Identity = 108/141 (76.60%), Postives = 121/141 (85.82%), Query Frame = 1 
Query:  118 RHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            ++NP+AF VSKIGK K+  QRNLDKA QKEY PLVDRTED PPP+ VVVMGPPG GKS+LIRSLVK YTR N+ EI GPIT++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   37 KNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPLVDRTEDTPPPITVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPITVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 177
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A067C0E8_SAPPC (Bms1-type G domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C0E8_SAPPC)

HSP 1 Score: 223 bits (569), Expect = 5.280e-65
Identity = 118/170 (69.41%), Postives = 136/170 (80.00%), Query Frame = 1 
Query:   34 KAHRAKKSGAKADKKRDHQKKKTGQS-TARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            K HR   SGAK +KK+ +  +K  Q+  A++NP+AF VSKIGK K+  QRNLDKA QKEY P VDR ED PPPV VVVMGPPG GKS+LIRSLVK YTR N+ EI GP+T++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KQHRKSTSGAKVNKKKRNDAQKNEQAKNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 180
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A1V9Z1F2_9STRA (Ribosome biogenesis protein BMS1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1F2_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.810e-65
Identity = 119/170 (70.00%), Postives = 136/170 (80.00%), Query Frame = 1 
Query:   34 KAHRAKKSGAKADKKRDHQKKKTGQS-TARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            K HR  KSGAK +KK+    +K  Q+  A++NP+AF VSKIGK K+  QRNLDKA QKEY P VDR ED PPPV VVVMGPPG GKS+LIRSLVK YTR N+ EI GP+T++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KQHRKSKSGAKVNKKKRSDAQKNEQAKNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 180
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: A0A6A5ABJ1_9STRA (Bms1-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABJ1_9STRA)

HSP 1 Score: 219 bits (559), Expect = 6.000e-65
Identity = 115/171 (67.25%), Postives = 132/171 (77.19%), Query Frame = 1 
Query:   34 KAHRAKKSGAKADKKRDHQKKK--TGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            K HR  KSGAK +KK              A+HNP+AF V+KIG+ K+ +QRNLDKA QKEY P V+R ED PPP CVVVMGPPG GKS+LIRSLVK YTR N+ +I GPIT++  K +R+T FEC NDL+AMVDLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   13 KDHRKSKSGAKVNKKXXXXXXXXAAADKNAKHNPKAFGVAKIGRAKRTIQRNLDKAHQKEYVPNVNRVEDTPPPTCVVVMGPPGSGKSTLIRSLVKRYTRHNIGDIKGPITVIAGKDKRITFFECPNDLNAMVDLAKIADLVLLMVDASFGFEMETFEFLNILQVAGFPKV 183
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: W4G4A1_9STRA (Bms1-type G domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4A1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.080e-64
Identity = 115/171 (67.25%), Postives = 136/171 (79.53%), Query Frame = 1 
Query:   34 KAHRAKKSGAKADKKRDHQKKK--TGQSTARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            K HR  KSGAK +KK+   +++       A+HNP+AF V+KIG+ K+ +QRNLDKA QKEY P V+R ED PPP CVVVMGPPG GKS+LIRSLVK YTR N+ +I GPIT++  K +R+T FEC NDL+AMVDLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KDHRKSKSGAKVNKKKKKNQEQLAAADKNAKHNPKAFGVAKIGRAKRTIQRNLDKAHQKEYVPNVNRVEDTPPPTCVVVMGPPGSGKSTLIRSLVKRYTRHNIGDIKGPITVIAGKDKRITFFECPNDLNAMVDLAKIADLVLLMVDASFGFEMETFEFLNILQVAGFPKV 181
[Close]
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Match: T0Q4Q6_SAPDV (Bms1-type G domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q4Q6_SAPDV)

HSP 1 Score: 223 bits (569), Expect = 2.140e-64
Identity = 118/170 (69.41%), Postives = 136/170 (80.00%), Query Frame = 1 
Query:   34 KAHRAKKSGAKADKKRDHQKKKTGQS-TARHNPRAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKA 540
            K HR   SGAK +KK+ +  +K  Q+  A++NP+AF VSKIGK K+  QRNLDKA QKEY P VDR ED PPPV VVVMGPPG GKS+LIRSLVK YTR N+ EI GP+T++  K RR+T FEC NDL+AM+DLAKIADLVLLMVDAS+GFEMETFEFLNILQV GFPK 
Sbjct:   11 KQHRKSTSGAKVNKKKRNDAQKNEQAKNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKV 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1208.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3YEJ2_HETAK2.200e-8799.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TXR8_9STRA1.450e-7569.32Ribosome biogenesis protein bms1-like protein (Fra... [more]
I2CPB3_NANGC2.500e-7369.32Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A6H5L2C7_9PHAE9.290e-6768.16Bms1-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A1V9ZFU4_9STRA2.110e-6676.60Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A067C0E8_SAPPC5.280e-6569.41Bms1-type G domain-containing protein n=1 Tax=Sapr... [more]
A0A1V9Z1F2_9STRA5.810e-6570.00Ribosome biogenesis protein BMS1 n=1 Tax=Achlya hy... [more]
A0A6A5ABJ1_9STRA6.000e-6567.25Bms1-type G domain-containing protein (Fragment) n... [more]
W4G4A1_9STRA2.080e-6467.25Bms1-type G domain-containing protein n=11 Tax=Aph... [more]
T0Q4Q6_SAPDV2.140e-6469.41Bms1-type G domain-containing protein n=1 Tax=Sapr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1208contigH-akashiwo_Contig1208:302252..303314 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G454
Preferred nameBMS1
PFAMsAARP2CN,RIBIOP_C
Model size541
Max annot lvl2759|Eukaryota
KEGG koko:K14569,ko:K15009
KEGG Pathwayko03008,ko04724,map03008,map04724
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000462,GO:0000469,GO:0000478,GO:0000479,GO:0001882,GO:0001883,GO:0001959,GO:0001960,GO:0002682,GO:0002683,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006417,GO:0006508,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009605,GO:0009607,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010648,GO:0016032,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018995,GO:0019001,GO:0019048,GO:0019049,GO:0019054,GO:0019056,GO:0019057,GO:0019058,GO:0019079,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0019785,GO:0020012,GO:0022613,GO:0023051,GO:0023057,GO:0030430,GO:0030490,GO:0030515,GO:0030682,GO:0030683,GO:0030684,GO:0030686,GO:0031323,GO:0031325,GO:0031326,GO:0031329,GO:0031331,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0034248,GO:0034470,GO:0034511,GO:0034641,GO:0034660,GO:0035639,GO:0035821,GO:0036094,GO:0039502,GO:0039503,GO:0039506,GO:0039507,GO:0039519,GO:0039520,GO:0039579,GO:0039604,GO:0039606,GO:0039611,GO:0039644,GO:0039648,GO:0039653,GO:0039656,GO:0039657,GO:0039690,GO:0039694,GO:0042025,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043656,GO:0043657,GO:0044003,GO:0044068,GO:0044073,GO:0044085,GO:0044092,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044359,GO:0044362,GO:0044403,GO:0044413,GO:0044414,GO:0044415,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044501,GO:0045088,GO:0045824,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050690,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051252,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051817,GO:0051832,GO:0051833,GO:0051834,GO:0052026,GO:0052027,GO:0052029,GO:0052031,GO:0052037,GO:0052055,GO:0052056,GO:0052167,GO:0052170,GO:0052173,GO:0052200,GO:0052204,GO:0052205,GO:0052250,GO:0052255,GO:0052261,GO:0052306,GO:0052309,GO:0052312,GO:0052493,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0060255,GO:0060338,GO:0060339,GO:0060759,GO:0060761,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0071704,GO:0071840,GO:0075109,GO:0075111,GO:0075112,GO:0075114,GO:0075136,GO:0075528,GO:0080090,GO:0080134,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1990904,GO:2000112,GO:2001141
Exons2
Evalue8.81e-68
EggNOG OGsCOG5192@1|root,KOG1951@2759|Eukaryota
DescriptionU3 snoRNA binding
Cds size540
COG categoryJ
BRITEko00000,ko00001,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387120.6718054-CDS-H-akashiwo_Contig1208:302251..3026671681387120.6718054-CDS-H-akashiwo_Contig1208:302251..302667Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1208 302252..302667 +
1681387120.6843061-CDS-H-akashiwo_Contig1208:303190..3033141681387120.6843061-CDS-H-akashiwo_Contig1208:303190..303314Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1208 303191..303314 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1208.9.1prot_H-akashiwo_Contig1208.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1208 302252..303314 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1208.9.1

>prot_H-akashiwo_Contig1208.9.1 ID=prot_H-akashiwo_Contig1208.9.1|Name=mRNA_H-akashiwo_Contig1208.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=180bp
MEALNITKSVKKAHRAKKSGAKADKKRDHQKKKTGQSTARHNPRAFSVSK
IGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLI
RSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADL
VLLMVDASYGFEMETFEFLNILQVHGFPKA
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mRNA from alignment at H-akashiwo_Contig1208:302252..303314+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1208.9.1 ID=mRNA_H-akashiwo_Contig1208.9.1|Name=mRNA_H-akashiwo_Contig1208.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1063bp|location=Sequence derived from alignment at H-akashiwo_Contig1208:302252..303314+ (Heterosigma akashiwo CCMP452)
ATGGAGGCTTTGAACATCACCAAATCCGTCAAGAAAGCCCACAGGGCCAA
AAAGTCCGGGGCAAAGGCAGACAAAAAACGAGATCACCAAAAAAAAAAGA
CTGGCCAGTCAACAGCCCGGCATAATCCCAGGGCCTTCTCTGTCAGTAAG
ATTGGCAAGACCAAAAAGAATGTACAGAGAAATTTGGATAAAGCTCAGCA
AAAGGAATATGCTCCACTCGTCGATCGTACAGAGGACATACCACCCCCTG
TGTGTGTGGTTGTGATGGGTCCTCCTGGCTGTGGCAAAAGCTCCCTTATC
CGATCTCTTGTGAAGTTGTACACAAGGCAGAACCTGACAGAAATAACCGG
GCCAATCACAATAGTTTGCAATAAAAAGCGGAGGTTGACGCTCTTTGAAT
GTACTAATGACTTGAGGTATGTTCACCAGCGTGCTGTTACATACGTTTGA
TGTCTCGTCCAGCCGTGTTTAGACCCATCTGTAGGATTTTGCACGCCCTG
CATAGCCTGTGAGCAAGTCATGACGAACTAACCGGCTAGATCGATTGTCT
AATCATACAATGAGTACCATCAAACTACAGCCATAGAAAAACACCACTGT
GTTGTTGTTTACCACGCCCGATGGTGTCATACTTTACATCAGGCAGCACC
TTCAAGTACTCTTCCACCTGACATCTAGCGCCTGCCCCTGCTGTCTGTTC
TCTGCACAACAAGCTGTGCCACTCATTTCACCAACACATTTAAAATTCAA
CCTCTAACCGGTTGCCGTACATTTGAGAATTCAATCTTCAACTGGTATCG
TATTTTCATTGCCCCTAAAACGTGACATCTAGCACATACCGACTCATTTA
TTCAACTTACTCGCATTTGAATAGTCTTCAGAGCTACAACACATATCATG
ACTGGCCTTTGATTTTTTTCTCCCCTGTTGTCAATTCAGTGCAATGGTGG
ACCTTGCAAAAATTGCAGATCTTGTTCTGCTGATGGTGGATGCCAGCTAT
GGGTTTGAAATGGAAACATTTGAATTTTTGAACATACTTCAAGTTCATGG
CTTTCCAAAGGCA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1208:302252..303314+

>mRNA_H-akashiwo_Contig1208.9.1 ID=mRNA_H-akashiwo_Contig1208.9.1|Name=mRNA_H-akashiwo_Contig1208.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=540bp|location=Sequence derived from alignment at H-akashiwo_Contig1208:302252..303314+ (Heterosigma akashiwo CCMP452)
ATGGAGGCTTTGAACATCACCAAATCCGTCAAGAAAGCCCACAGGGCCAA
AAAGTCCGGGGCAAAGGCAGACAAAAAACGAGATCACCAAAAAAAAAAGA
CTGGCCAGTCAACAGCCCGGCATAATCCCAGGGCCTTCTCTGTCAGTAAG
ATTGGCAAGACCAAAAAGAATGTACAGAGAAATTTGGATAAAGCTCAGCA
AAAGGAATATGCTCCACTCGTCGATCGTACAGAGGACATACCACCCCCTG
TGTGTGTGGTTGTGATGGGTCCTCCTGGCTGTGGCAAAAGCTCCCTTATC
CGATCTCTTGTGAAGTTGTACACAAGGCAGAACCTGACAGAAATAACCGG
GCCAATCACAATAGTTTGCAATAAAAAGCGGAGGTTGACGCTCTTTGAAT
GTACTAATGACTTGAGTGCAATGGTGGACCTTGCAAAAATTGCAGATCTT
GTTCTGCTGATGGTGGATGCCAGCTATGGGTTTGAAATGGAAACATTTGA
ATTTTTGAACATACTTCAAGTTCATGGCTTTCCAAAGGCA
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