mRNA_H-akashiwo_Contig1202.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 208 bits (529), Expect = 3.300e-64 Identity = 101/135 (74.81%), Postives = 116/135 (85.93%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKLRLGGDLILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
Y SMVGTLAW+ANWTRPEL F V KLQR Q NPEPKHFEA QR FR LKGT QSE LRLGGDL+LRA++DSDFC DR GKSVTGY++ LGD+P+VW+S LQ AV+TST+EA+YLALRSAVKDIMW+R LL ++G
Sbjct: 135 YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGT-QSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMG 268
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 119 bits (297), Expect = 1.870e-28 Identity = 57/133 (42.86%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 7 SMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKLRLGGDLILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
S+VGT+ WLA WT PE+ +++ L + ++P A+ + R L T + + + LGG L L AY D+DFC +R KG+S +G+ I LG SP++W+S +Q V+ +T EA+Y++LR+AV D+MW++ LL LG
Sbjct: 784 SLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWT-EDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLG 915
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A328KN85_9BACI (Uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. SRB_8 TaxID=1969377 RepID=A0A328KN85_9BACI) HSP 1 Score: 110 bits (275), Expect = 2.120e-28 Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGT-------HQSEKLRLGGDLILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
Y +VG+L WLA+ TRP+++ AV L RF SNP H+ AAQRV R L GT H+ E+ G L Y+DSD+ D +S +G+ ML PV W S LQ++VS S++EA+Y+AL SA ++ W+R LL ++G
Sbjct: 3 YGELVGSLIWLASNTRPDISTAVGSLCRFISNPGRPHWVAAQRVLRYLAGTSSFGITYHRQEQ----GSSDLFGYSDSDWAGDPDTRRSTSGFAFMLAGGPVSWKSKLQSSVSLSSVEAEYIALCSAAREAYWLRQLLQEIG 140
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A286UFH8_9AGAM (Uncharacterized protein n=2 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UFH8_9AGAM) HSP 1 Score: 111 bits (278), Expect = 6.420e-28 Identity = 61/139 (43.88%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKLRLGGDL----ILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
Y +VG+L +LA T P+++FAV KL +F SNP H++AAQ + R L+GT +S KL D + +YTD+DF DR +S +G VI +G V W+S LQ V+ ST EA+Y+A +A ++++W+RYLL +LG
Sbjct: 6 YAQLVGSLMYLAICTYPDISFAVGKLGQFSSNPGIAHWKAAQHLLRYLQGT-KSYKLTYAPDPSQTELFTSYTDADFAGDRSTRRSTSGMVIKVGTGAVSWSSKLQGIVTLSTTEAEYVAAVTAGQEVIWLRYLLTELG 143
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE) HSP 1 Score: 116 bits (290), Expect = 1.660e-27 Identity = 57/136 (41.91%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSE-KLRLGGDLILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
Y +VG L +LA TRP++ F V KL +F SNP +H+ AA+RV R LKGT + K+ D I+ A++DSD+ + KS TG++I +G +PV+W SN Q ++ STMEA+++A+ S +++W+ Y+L ++G
Sbjct: 967 YRRLVGKLMYLAQATRPDIAFFVSKLGQFSSNPGKQHWAAAKRVLRYLKGTENYQLKITKDNDQII-AHSDSDWAGSKDDRKSTTGFIIKIGRTPVIWKSNKQACIALSTMEAEFIAISSCCMELVWLEYVLSEIG 1101
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI) HSP 1 Score: 114 bits (285), Expect = 7.810e-27 Identity = 59/138 (42.75%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKL-RLGGDLI--LRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
+ +MVG L W+A RP+L FA L RFQ+ P P+H +AA+R+ R L+ T + + + G D I L + D+DF D + +S TG+V + +PV WAS LQT+VS ST+EA+Y+AL +++ +W+R LL +LG
Sbjct: 928 FAAMVGCLKWIAQTMRPDLMFACGVLSRFQARPMPEHMDAAKRLMRFLRKTGDEDLVYQPGTDGIPRLAGFADADFAGDSETSRSTTGFVFYIHGNPVSWASRLQTSVSMSTVEAEYIALAEGLREGLWLRNLLSELG 1065
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI) HSP 1 Score: 114 bits (285), Expect = 7.860e-27 Identity = 59/138 (42.75%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKL-RLGGDLI--LRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
+ SM+G L W+A RP+L F L RFQ+ P P H EAA+R R L+ T +++ + + G D I L + D+DF D + +S TG+V + +PV WAS LQT+VS ST+EA+Y+AL +++ +W+R LL +LG
Sbjct: 1027 FASMIGCLKWIAQTVRPDLMFICGVLSRFQARPMPIHMEAAKRAMRFLRKTAEADLVYQPGTDSIPRLSGFADADFAGDSETSRSTTGFVFYVQGNPVSWASRLQTSVSMSTVEAEYIALAEGLREGLWLRNLLSELG 1164
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: UPI001E278ED1 (secreted RxLR effector protein 161-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E278ED1) HSP 1 Score: 107 bits (267), Expect = 1.240e-26 Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKLRLGGDLILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVD 399
Y +G+L +L+ +TRP+++FAV L RFQ+NP+ H+ +RVFR LKGT Q G L Y D+DF D + KS T +VI +PVVW S LQ+ ++ S+ EA+++AL A +++++ LL +
Sbjct: 36 YKKAIGSLLYLSLFTRPDISFAVGYLSRFQANPQQYHWTLVKRVFRYLKGTSQLGLKYTAGSPTLSCYCDADFAGDEKSQKSTTSFVIFAFGNPVVWCSKLQSTLAQSSAEAEFIALTHATNEVLFLAQLLAE 168
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A2N5TK21_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5TK21_9BASI) HSP 1 Score: 113 bits (282), Expect = 2.010e-26 Identity = 54/135 (40.00%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKLRLGGDLILRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
Y ++G+L W+A TRP+++FAV+KL +F +P H+ AA RV L T +LRLGG L+ Y+D+D+ +DR+ +S + Y +GD + W S Q VS S+ EA+Y AL + K+ +W+R +L +LG
Sbjct: 1244 YNQIIGSLLWVAQCTRPDVSFAVNKLSQFLKDPSASHWTAAVRVLNYLVSTKHL-RLRLGGSLVCSGYSDADWAEDREDRRSTSAYTFRIGDGAISWKSRKQATVSLSSTEAEYKALSDSCKEGIWLRNILTELG 1377
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI) HSP 1 Score: 112 bits (280), Expect = 3.680e-26 Identity = 57/138 (41.30%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 1 YCSMVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQSEKL-RLGGDLI--LRAYTDSDFCQDRQKGKSVTGYVIMLGDSPVVWASNLQTAVSTSTMEADYLALRSAVKDIMWIRYLLVDLG 405
+ +MVG L W+A RP+L FA L RFQ+ P P+H +AA+R R L+ T + + + G D I L + D+DF D + +S TG+V + +P+ WAS LQ +VS ST+EA+Y+AL +++ +W+R LL +LG
Sbjct: 927 FAAMVGCLKWIAQTIRPDLMFACGVLSRFQARPMPEHMDAAKRTMRFLRKTADEDLVYQPGTDSIPRLAGFADADFAGDTETSRSTTGFVFYIHGNPISWASRLQVSVSMSTVEAEYIALAEGLREGLWLRNLLSELG 1064 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1202.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1202.6.1 >prot_H-akashiwo_Contig1202.6.1 ID=prot_H-akashiwo_Contig1202.6.1|Name=mRNA_H-akashiwo_Contig1202.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=132bp MVGTLAWLANWTRPELTFAVDKLQRFQSNPEPKHFEAAQRVFRCLKGTHQback to top mRNA from alignment at H-akashiwo_Contig1202:169600..170004+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1202.6.1 ID=mRNA_H-akashiwo_Contig1202.6.1|Name=mRNA_H-akashiwo_Contig1202.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=405bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:169600..170004+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1202:169600..170004+ >mRNA_H-akashiwo_Contig1202.6.1 ID=mRNA_H-akashiwo_Contig1202.6.1|Name=mRNA_H-akashiwo_Contig1202.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=396bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:169600..170004+ (Heterosigma akashiwo CCMP452)back to top |