mRNA_H-akashiwo_Contig1202.3.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A7S2FAF0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FAF0_9STRA) HSP 1 Score: 233 bits (595), Expect = 7.640e-70 Identity = 116/263 (44.11%), Postives = 169/263 (64.26%), Query Frame = 1
Query: 13 QSNAFSSTITFCIILASILVAMQTYPTLEQNKAVLILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGG--VSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDV 795
Q+ F+ TI CI++A V +Q+YP +E N + + D+I+L +F+ E + KI+ +G PY+YFT + WN FDF +V F G G V K+ QL I+V G+ GL+ VY+ +L+++VFY+FAV+AV +FG NDPA FG + +A +TLFRC+T EDWTDVMYINM+GCD YD GLY+ A + +Y+ FG F G++C P +++ VYF F+ VSAFV+LSLF+G++ GM+ A+ED+
Sbjct: 128 QNTWFNGTIIACIVIAGANVGVQSYPDMEDNTVLKVADDIILALFTLEVIFKILEQGRYPYKYFTNQDKEWNIFDFTIVGIAYVFMVAGGSGSSVXXXXXXXXXXXXXXXNKIKQLNIIVHGLATGLQHCVYIFVLMMIVFYMFAVIAVIFFGDNDPAHFGNIAVAMLTLFRCSTLEDWTDVMYINMYGCDEYDSGLYSPANVSSLIYTQFGTFQGYDCYRPKAQPIIAAVYFGLFVLVSAFVMLSLFVGAVCNGMNAAVEDM 390
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A850G3S3_9DELT (Ion transporter n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850G3S3_9DELT) HSP 1 Score: 199 bits (507), Expect = 2.750e-59 Identity = 114/270 (42.22%), Postives = 163/270 (60.37%), Query Frame = 1
Query: 1 KALAQSNAFSSTITFCIILASILVAMQTYPTLEQ--NKAVLILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDVNRL 804
K++A + F +TIT I+LA +LV M+TYP L + + A+ + D+I+LW+F E +VK+ EG KP+RYF P WN FDFV+V C F P V+ LRL +P+LQILVG +++ + S+VYVS+LL ++FY++AV AVF FG NDP F L IA ++LFR T EDWTDVMYINM+GCD Y +G + +C++P+ L+ ++FV F+ ++L+LFIG I GM EA + N +
Sbjct: 9 KSIADAAWFQNTITIVILLAGVLVGMETYPALVERFHSALHLGDQIILWIFVVEIVVKMAAEGRKPWRYFLDP---WNVFDFVIVAAC--FLPFEGNAVTVLRLXXXXXXXXXXXALPKLQILVGALLKSIPSMVYVSVLLFMLFYVYAVAAVFLFGENDPLHFENLEIAMLSLFRVVTLEDWTDVMYINMYGCDRY----------------GYGPDSVVQCTSPNAQPLLGALFFVSFVLTGTMIILNLFIGVIMSGMDEAQAEANEM 257
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A6GA84_9DELT (K+ transporter, Kef-type n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6GA84_9DELT) HSP 1 Score: 192 bits (488), Expect = 2.130e-56 Identity = 115/263 (43.73%), Postives = 156/263 (59.32%), Query Frame = 1
Query: 1 KALAQSNAFSSTITFCIILASILVAMQTYPTLEQN--KAVLILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEA 783
K +A + F ++IT I+LA +LV ++TYP L + + I D+I+LW+F AE +VK++ EG KP+RYF P WN FDFV+V C F P V+ LRL +P+LQILVG +++ + S+VYVSLLL ++FY++AV AVF FG NDP F L IA ++LFR T EDWTDVMYINM+GCD Y YSA +C P L+ ++FV F+ ++L+LFIG I GM EA
Sbjct: 9 KKIADAAWFQTSITVVILLAGVLVGIETYPALVERFEHPIHIGDQIILWIFVAEIVVKMLAEGKKPWRYFLDP---WNVFDFVIVAAC--FLPFEGNAVTVLRLXXXXXXXXXXXXLPKLQILVGALLKSIPSMVYVSLLLFMLFYVYAVAAVFLFGTNDPLHFENLEIAMLSLFRVVTLEDWTDVMYINMYGCDRYG-------------YSADSVV---QCVTPKAQPLLGALFFVSFVLTGTMIILNLFIGVIMSGMDEA 250
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A7S3XZR8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZR8_HETAK) HSP 1 Score: 200 bits (509), Expect = 4.340e-55 Identity = 120/278 (43.17%), Postives = 170/278 (61.15%), Query Frame = 1
Query: 25 FSSTITFCIILASILVAMQTYPT-----LEQNKAVLILD----EIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVG--SGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDVNRLKNQALAE 825
F + IT I LA +LV +QT+ Q AV D +L +F+ E +KII E +P+RYF G WN FDFV+VL + PVG SG + LR +PQL ++V MI G++SI ++ ++L LV+Y+FA++ F NDP FG L +A +TLFRC+T EDWTDVMYIN+FGCDV+DGGLYT + + ++S G F G+ C+ P + +S VYF++F VSAFV+LSLFIG++T+GM+ ++E + K + AE
Sbjct: 76 FVNLITGVICLAGVLVGIQTFEFDWQVYNAQGSAVFDFDAFFENFILAIFTLEVGLKIIAEHYRPWRYFRG---GWNNFDFVIVL--GSYMPVGGASGMLVLLRXXXXXXXXXXXXSLPQLAVIVNAMIMGMRSIGFIGVILGLVYYVFAIMGWIMFNVNDPWHFGTLHMAVLTLFRCSTLEDWTDVMYINIFGCDVFDGGLYTTSNTTEMIHSQIGTFFGYSCTNPQKAPFLSSVYFLFFTVVSAFVILSLFIGAVTMGMTTSIEALAEKKKEGNAE 348
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A7V9MPC4_9BACT (Ion transporter n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V9MPC4_9BACT) HSP 1 Score: 189 bits (479), Expect = 5.620e-55 Identity = 110/282 (39.01%), Postives = 165/282 (58.51%), Query Frame = 1
Query: 1 KALAQSNAFSSTITFCIILASILVAMQTYPTLEQNKAVL--ILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVY--DGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDVNRLKNQALAESVN 834
K +A S F++ I I++A I+V ++TY + + +L I+D+++LW+F E ++KI G KP+ YFT P WN FDFV+V C F PV + V+ LRL R+LR KL +P+LQ +VG +++ + S+ Y++LLLL+ FY++ V+ F F NDP F L ++ ++LFR T EDWTD+MYINM+GCD Y DG + C+AP+ + S +YFV FI A V+++LFIG I GM + E++ + N L N
Sbjct: 2 KTIADSKVFNAFIIIVIVIAGIVVGIETYKGIAEEYGILLHIIDQLILWIFVGEAVIKIGSYGKKPWLYFTDP---WNVFDFVIVAVC--FMPVNAAYVAVLRLARILRAFKLVTALPKLQTIVGSLLKSIPSMGYIALLLLIHFYIYGVMGTFLFADNDPIHFRNLQMSMLSLFRAVTLEDWTDLMYINMYGCDNYGYDG-------------------SHIPCTAPNAMPVASAIYFVSFIITGAMVVINLFIGVIIGGMDDMKEELKKDLNDKLRREAN 259
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A2S9XQG2_9DELT (Ion transport protein n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9XQG2_9DELT) HSP 1 Score: 187 bits (475), Expect = 1.600e-54 Identity = 113/274 (41.24%), Postives = 162/274 (59.12%), Query Frame = 1
Query: 1 KALAQSNAFSSTITFCIILASILVAMQTYPTLEQ--NKAVLILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDVNRLKNQA 816
K +A + F ++IT I+LA +LV ++TYP L + + A+ I D+I+LW+F AE +VK+ EG +P+RYF P WN FDF++V C F P V+ LRL +P+LQILVG +++ + S++YVS+LL ++FY++AV AVF FG NDP F L +A ++LFR T EDWTDVMYINM+GCD Y YSA C++P L+ ++FV F+ + ++L+LFIG I GM EA + L A
Sbjct: 6 KKIADAAWFQNSITAVILLAGVLVGLETYPGLVERFHSALHIGDQIILWIFVAEIVVKMAAEGKRPWRYFLDP---WNVFDFIIVAAC--FLPFEGNAVTVLRLXXXXXXXXXXXALPKLQILVGALLKSIPSMLYVSVLLFMLFYVYAVAAVFLFGENDPLHFQTLEMAMLSLFRVVTLEDWTDVMYINMYGCDRYG-------------YSADSVVL---CTSPVAQPLVGALFFVSFVLIGTMIILNLFIGVIMSGMDEAQSEAVELARAA 258
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A2E4F7F5_9DELT (Potassium transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E4F7F5_9DELT) HSP 1 Score: 185 bits (470), Expect = 1.090e-53 Identity = 120/281 (42.70%), Postives = 161/281 (57.30%), Query Frame = 1
Query: 1 KALAQSNAFSSTITFCIILASILVAMQTY----PTLEQNKAVL-ILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYD--GGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDVNRLKNQALA 822
K +A S AF+ I + I+ A +LV +QTY P + + ++ +LDEI+LW+F AE +VK + EGS+P+RYF P WN FDF +V C F P + + LRLL +P+LQ+LV +++ + S++YVS+LLLL+FY++A VF FG NDP FG L IA +TLFR T EDWTDVMYI M GCD Y G T +E PV+ A VYFV F+ + A + L+LFIG I GM EA E+V QA A
Sbjct: 6 KGIADSKAFNDFIVYAILFAGLLVGIQTYEATSPVVREWMGLIDLLDEIILWIFVAEVIVKTLAEGSRPWRYFFDP---WNVFDFTIVAVC--FLPFDAEYAAVLRLLXXXXXXXXXXALPRLQVLVATLLKSIPSLMYVSILLLLLFYVYACAGVFIFGANDPIHFGALPIAMLTLFRVVTGEDWTDVMYIAMNGCDGYSYPEGACTSSEA-MPVFGA--------------------VYFVTFMLLGAMIFLNLFIGVILSGMEEASEEVAADNEQASA 260
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A2E6ETK6_9RICK (Potassium transporter n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E6ETK6_9RICK) HSP 1 Score: 184 bits (467), Expect = 3.420e-53 Identity = 106/263 (40.30%), Postives = 157/263 (59.70%), Query Frame = 1
Query: 7 LAQSNAFSSTITFCIILASILVAMQTYPTLEQNKAVLILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALEDV 795
+A S+ F++ I II A ++V +QTYP L + + +LD I+LW+F AE L+K+ +GS+P+RYF P WN FDF++V C F P + + LRL RLLRV KL + +P+LQ+LV +++ + S+ Y+SLLL L+FYL+ V+ F + NDP F L +T++R +T EDWTDVMYINMFGC Y + N+ A +G SA +F F ++ ++L+LFIG I GM EA +++
Sbjct: 9 IANSDLFNNFIIGIIIAAGVVVGIQTYPELRNDPTLSLLDSIILWIFVAEVLIKMGSQGSRPWRYFLDP---WNVFDFIIVAVC--FLPGETSFAAVLRLARLLRVLKLVRALPRLQVLVSALLKSIPSMFYISLLLSLLFYLYGVLGTFLYQENDPVHFEDLQTGLLTMYRVSTLEDWTDVMYINMFGCHEYGYDSSARVPCNEAAAKALVGEDGIAWSA--------AFFFSSFTLLATMIILNLFIGVIMTGMEEAQKEL 258
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A4Y6PVP3_9DELT (Ion transporter n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PVP3_9DELT) HSP 1 Score: 184 bits (466), Expect = 6.180e-53 Identity = 115/283 (40.64%), Postives = 167/283 (59.01%), Query Frame = 1
Query: 7 LAQSNAFSSTITFCIILASILVAMQTYPTLEQ--NKAVLILDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVYDGGLYTQAEFNQPVYSAFGKFNGFE--CSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEA------LEDVNRLKNQALAE 825
+A++ F++ ITF IILA ++V M+TYP++ + + IL+EI+LW+F AE +VK+ EGSKP+ YF P WN FDF +V C F P LRL+R +P+LQ+LVG +++ L S+ YV++LL L+FY++AV AVF FG NDP F L +A ++LFR T EDWTDVMYINM+GCD Y ++G E C+ P+ +++ +FV F+ + V+L+LFIG I GM EA ++ R+K Q + E
Sbjct: 9 IAEAKWFTNFITFVIILAGVVVGMETYPSVVEAYETELHILNEIILWIFVAEVVVKMGAEGSKPWNYFKDP---WNVFDFFIVAVC--FVPGAGSYAVILRLVRXXXXXXXXXALPRLQLLVGALLKSLPSMGYVTILLGLLFYVYAVAAVFIFGANDPMHFETLHLATLSLFRVVTLEDWTDVMYINMYGCDEYG-------------------YDGVEHLCTDPNAMPVVASAFFVSFVLLGTMVILNLFIGVIMNGMEEATMEQEEFDERERMKKQGITE 267
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Match: A0A6G6GKM1_9FLAO (Ion transporter n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GKM1_9FLAO) HSP 1 Score: 182 bits (461), Expect = 1.780e-52 Identity = 108/268 (40.30%), Postives = 157/268 (58.58%), Query Frame = 1
Query: 1 KALAQSNAFSSTITFCIILASILVAMQTYPTLEQNKAVLI--LDEIVLWVFSAECLVKIIGEGSKPYRYFTGPEWRWNTFDFVLVLFCMPFFPVGSGGVSFLRLLRLLRVTKLFKKVPQLQILVGGMIQGLKSIVYVSLLLLLVFYLFAVVAVFYFGPNDPAQFGGLGIAFVTLFRCATCEDWTDVMYINMFGCDVY--DGGLYTQAEFNQPVYSAFGKFNGFECSAPSRHWLMSVVYFVYFITVSAFVLLSLFIGSITIGMSEALED 792
K +A S F ++IT II+A ILV + TY + V++ L+++VLW+F AE ++K+I EG KP+RYF WN FDFV+V F P G V+ LRL +P+LQ+LV +++ + S+ YV++LL+L+FY++AV VF+FG NDP F L ++ ++LFR T EDWTD+MYINM+GC+ Y DG + C+ S + L SV YFV F+ + ++L+LFIG I GM EA E+
Sbjct: 6 KKIANSKWFQNSITIAIIIAGILVGIATYTEFAEKHHVILELLNKVVLWIFVAEVVIKMIAEGKKPWRYFYD---SWNVFDFVIV--AAAFLPFGGSSVAILRLXXXXXXXXXXXXLPKLQLLVSALLKSIPSMGYVTILLMLLFYIYAVAGVFFFGANDPIHFENLQMSMLSLFRVVTLEDWTDIMYINMYGCENYGYDGNMNL-------------------CTLSSANPLGSVTYFVSFVLLGTMIILNLFIGVIMNGMDEAREE 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1202.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1202.3.1 >prot_H-akashiwo_Contig1202.3.1 ID=prot_H-akashiwo_Contig1202.3.1|Name=mRNA_H-akashiwo_Contig1202.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=279bp KALAQSNAFSSTITFCIILASILVAMQTYPTLEQNKAVLILDEIVLWVFSback to top mRNA from alignment at H-akashiwo_Contig1202:150248..151084+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1202.3.1 ID=mRNA_H-akashiwo_Contig1202.3.1|Name=mRNA_H-akashiwo_Contig1202.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:150248..151084+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1202:150248..151084+ >mRNA_H-akashiwo_Contig1202.3.1 ID=mRNA_H-akashiwo_Contig1202.3.1|Name=mRNA_H-akashiwo_Contig1202.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:150248..151084+ (Heterosigma akashiwo CCMP452)back to top |