mRNA_H-akashiwo_Contig1200.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 379 bits (972), Expect = 1.880e-124 Identity = 199/298 (66.78%), Postives = 230/298 (77.18%), Query Frame = 1
Query: 1 PAQAQRLPGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQDAN 894
P Q++RLP + Y ML E+ SM+ V +LVDLP GA+ I TRW+ SKK DAD L KY KARLVAQGFTQR GVD+ TY+PVI+ PSLRLMLSIAANKG+AV+ LDISTAFLN IDGDV VKQPPGFVDKD PHKVWKL+K+LYGLRQ PR+ WY TLH FLLQQNFVRSDYES Y KN TGE+TM+AV V +LV+ SS+ PS+V LK SF SRF ITDLG LT ILGIKV RD NKCF+L QASFV+ I+KFGLD+LPA C TPM + DL+P+P + +L DAN
Sbjct: 117 PNQSRRLPDKEEYDQAMLKELDSMESHGVKELVDLPPGAHAIGTRWILSKKFDADGNLQKY-KARLVAQGFTQREGVDFSTTYSPVIAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRL-WYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVL-SSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDA-ISKFGLDYLPA-CRTPMTNATDLTPTPGFKASLPDAN 409
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 327 bits (839), Expect = 1.820e-106 Identity = 166/270 (61.48%), Postives = 207/270 (76.67%), Query Frame = 1
Query: 226 GVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQDANRYRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVF 1035
G+D+ TY+PV++ SLRL+L+I+ANKGYAVD+LDISTAFLNG + DV V+QPP +VD P+KVWKL K+LYGL+Q PR+ WYM LH+ L F RS +ES Y+ ++ G E M+AV V +LVI S S +IV + K S AS++ +TD G LTQILGIKVVRD+RNKCF L Q SF+K +AKFGLD+LPA C TP+DHTVDL+P+P + L DAN YRS MVGTLAW++NWTRPELAF VHKLQR+Q NPEP+HFEA +R F
Sbjct: 3 GIDFQQTYSPVVNAASLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRV-WYMELHDHLESLGFKRSGHESCLYIHRDG--GNELMVAVYVDDLVI-SGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDA-LAKFGLDYLPA-CKTPIDHTVDLTPTPGFKAELSDANLYRS-MVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAF 265
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK) HSP 1 Score: 332 bits (851), Expect = 5.900e-106 Identity = 173/246 (70.33%), Postives = 194/246 (78.86%), Query Frame = 1
Query: 1 PAQAQRLPGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRN 738
P Q++RLP D Y ML E+GSM+ V +LVDLP GAN+I TRWV SKK DAD L KY KARLVAQGFTQR GVD+ ATY+PV++ PSLRLMLSIAANKG+AV+ LDISTAFLN IDGDV VKQPPGFVDKD PHKVWKL+K+LYGLRQ PR+ WY TLH FLLQQNFVRSDYES Y KN TGE+TM+AV V +LV+ SS+ PS+V LK SF SRF ITDLG LT ILGIKV RD N
Sbjct: 188 PNQSRRLPDKDEYDRAMLKELGSMESHDVKELVDLPPGANVIGTRWVLSKKFDADGNLQKY-KARLVAQGFTQREGVDFSATYSPVVAAPSLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRL-WYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVL-SSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTN 430
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 323 bits (828), Expect = 1.470e-103 Identity = 187/359 (52.09%), Postives = 233/359 (64.90%), Query Frame = 1
Query: 481 MTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQDANRYRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVFSLSQGHSV*TATPWG----RPYSLSLH*L*LLSR*AARQVSNGLCHYAWGLTNCVLFQASDCSQHIYCGG*VPGTTEVCYIK-----DDIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALNAEVF 1530
M LH+ L F RS +ES Y+ ++ G E M+AV V +LVI S S ++V + K S AS++ +TD G LTQILGIKVVRD+RNKCF L Q SF+K +AKFGLD+LPA C TP+DHTVDL+P+P + L DAN YRS MVGTLAW++NWTRPELAF VHKLQR+Q NPEP+HFEA +R F +G + G R +S S R + Y L + + +S G T E Y+ DIMWLR+LL ++G PQ EPTPVVEDNSAC+EWA DM+V+++NRHFHVSYHLAKEQV+LGTI+M Y KT DQ+ADI T+ALNA F
Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDG--GNELMVAVYVDDLVI-SGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDA-LAKFGLDYLPA-CKTPLDHTVDLTPTPGFKAELSDANLYRS-MVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDS-------DFCNDRVDGKSVTGYILFLGDAPIVWSSKLQ-----GAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQH-EPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANF 340
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 305 bits (782), Expect = 5.770e-90 Identity = 195/526 (37.07%), Postives = 290/526 (55.13%), Query Frame = 1
Query: 4 AQAQRLPGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQ--DANRYRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERV-----FSLSQGHSV*TATPWGRPYSLSLH*L*LLSR*AARQVSNGLC---HYAWGLTNCVLFQA------SDCSQHIYCGG*VPGTTEVCYIK-----DDIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALN 1518
A AQR P ++ + E S+ +V +LVD P GANI+ RW+ +KK DAD L KY KARL AQG++Q GVDY T++PV+S SLR +L+IAA++ + +DI TAFL+G ++ D+ +KQP G+ HKV KL+KSLYGL+Q P+ CWY L+ FLLQQ + R+ Y+S Y K STG +T+I+V V ++V+ +SSD S + +K + + + ++D+G + ILGIKV RDR + L Q SF++ KF + V T P++ +D++ + L +A ++RS +VGT+ WL+ WT PE+A+++H L + ++P A+ + ++ +G ++ G P +L+ + C H + +F S QH TTE Y+ D+MWL+ LL LGY Q P+ EDN ACI WA D VS+ RH HVSYH KE V I++ Y T Q+AD+FT+ L+
Sbjct: 488 AHAQRSPDWMRWREAVADEYDSLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKY-KARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPK-CWYQNLNGFLLQQGYTRNGYDSCVY-SKVSSTGGKTLISVYVDDIVL-ASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIE-EACEKFQVRSYEPV-TNPVNKGIDVNINTDTSRRLSTFEAKKFRS-LVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTL------GGPLNLTAY------------ADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCV----TRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQGC--VPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A540M9F0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540M9F0_MALBA) HSP 1 Score: 238 bits (608), Expect = 9.750e-69 Identity = 165/520 (31.73%), Postives = 266/520 (51.15%), Query Frame = 1
Query: 1 PAQAQRLPGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGL-DFLPAVCTTPMDHTVDLSPSPRYVCALQDANRYRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVFSLSQGHSV*TATPWGRPYSLSLH*L*LLSR*AARQVSNGLCH----YAWGLTNCVLFQASDCSQHIYCGG*VPGTTEVCYIKD-----DIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALNAEVF 1530
P Q ++Q M E+ +++ LVD P +I RWVF KL+ D + K+ KARLVA+G+ Q+ G+DY+ T+APV + ++R ++++AA KG+ + LD+ +AFLNG ++ +V ++QP GF K+ HKV+KLRK+LYGL+Q PR WY + +L NF+RS E+ Y K+ G ++++ V ++V SS +++ + K+ ++E++DLG L LG+ +++ F+ Q+ + K + + KFGL D P P + + D YR +VG+L +L+ TRP+L +A L R + P +HF A RV QG +G Y+ + + A S C YA+ + V AS + T E Y+ +WLR +L D G Q A+ TP+ DN + I K+ + +K RH + +H +E + G I + + ++ +QLADIFT+AL E F
Sbjct: 6 PEDYQEAAQDQAWQEAMNAEINMIEKNDTWQLVDRPTDKPVIGVRWVFKTKLNLDGTVQKH-KARLVAKGYAQKPGIDYNETFAPVARLDTIRTLIALAAQKGWKLFQLDVKSAFLNGILEEEVYIEQPEGFEVKNACHKVYKLRKALYGLKQAPR-AWYSEIDAYLTSCNFIRSTSEATLYT-KSDEEGGILIVSIYVDDIVYTGSSK-TLLSEFKMEMMQKYEMSDLGLLHHFLGMGILQTENG--VFIHQSKYAK-SLLVKFGLEDCKPVSIPLPTGEKLKKVDGSEFA----DETMYRK-IVGSLLYLTA-TRPDLMYAASLLSRFMNGPTKKHFGIARRVLRYVQG-----TLSYGIEYTKDSDAILVGFCDADWAGSEDDCRSTSGYAFSFGSGVFSWASVKQNTV-----ALSTAEAEYVSAAEATAQAIWLRFVLDDFGEMQ-ADATPLFCDNMSAISMVKNPVFHQKTRHINRKFHFIREAMQEGVINVKFCRSEEQLADIFTKALPRERF 501
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RPT4_CAJCA) HSP 1 Score: 249 bits (635), Expect = 1.800e-68 Identity = 168/524 (32.06%), Postives = 275/524 (52.48%), Query Frame = 1
Query: 1 PAQAQRLPGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQDANRYRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVFSLSQGHSV*TATPWGRPYSLSLH*L*LLSR*AA--------RQVSNGLCHY------AWGLTNCVLFQASDCSQHIYCGG*VPGTTEVCYIKDDIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALNAEVF 1530
P Q G S++ M E+ ++K+ +LV LP+ I +WV+ K D+ ++ +Y KARLVA+G++QRAG+DY +APV + ++RL++S+AA + + +D+ +AFLNG ++ +V ++QP G+ K KV +L+K+LYGL+Q PR W + + + + NF++ YE Y+ + G++ +I + +I + ++PS+ + K FE+TD+G + LGI+V + N+ F+ Q S+ K + KF LD V TPM+ + LS D Y+S +VG+L +L+ TRP++ +AV + R P H + A+R+ +G T +G YS S + L+ + R+ ++G Y W + S C V T+ VC+ +WLRNLL +L PQ EPT + DN + I AK+ + +++H H YH +E ++ +QM Y KT DQ+ADIFT+ L EVF
Sbjct: 835 PMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRY-KARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPR-AWNVRIDKYFKEVNFIKCPYEHALYI---KAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQG--NEGIFITQESYAKDL-LKKFKLDDANPV-GTPMECGIKLSKDEEGEKV--DPTLYKS-LVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKG-----TTSFGLYYSNS-NDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEY-----VAATSCVCHA----IWLRNLLKELSLPQ-VEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVF 1329
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 241 bits (615), Expect = 9.240e-68 Identity = 165/520 (31.73%), Postives = 271/520 (52.12%), Query Frame = 1
Query: 22 PGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQDANRYRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVFSLSQGHSV*TATPWGRPYSLSLH*L*LLSR*AARQVSNGLCHYAWG-------LTNCVLFQASDC-----SQHIYCGG*VPGTTEVCYIK-----DDIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALNAEVF 1530
P ++ M EM S+ +V +LV+LP+G + ++WVF K+DAD ++ KARLVAQGF+Q+ G DY T++PV+ S+R +++ A G + +D+ TAFLNG + +V ++QP GFV K + H V KL +S+YGL+Q PR CW + L L + FV++ + Y +TGE +IAV V ++++ SD ++ ++K A FEI D+G LT LG+K+++ ++ QA++ + + KFG++ V +TP+D L + D +++S+ VG+L +LS TRP++A+AV+ + R + P +H+ A +R+ +G +L+L LL + G W + +FQ S S+ C T E Y+ + +W+R L+ DL Q A PT + EDN + I AK+ + +H + YH +E++ G I + Y T D +AD+FT+ L+ E F
Sbjct: 247 PDKAKWKEAMEKEMESLYANNVWNLVELPKGRKAVGSKWVFKVKVDADGTFERH-KARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQYGLKLHQMDVKTAFLNGELKEEVYMQQPEGFVVKGKEHLVCKLNRSIYGLKQSPR-CWNIVLDEQLKKMGFVQTTGDPCIYTA---ATGEMFIIAVYVDDILLAGCSDKRMM-EVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENV-LKKFGMENSKPV-STPVDINTKLVKHSDD-SEVMDPKQFQSA-VGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKG-------------TLNLG---LLYNKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVA--LSTAEAEYMALASAAQEAVWMRQLMTDLKVNQ-AGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKF 737
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 239 bits (609), Expect = 1.340e-67 Identity = 156/522 (29.89%), Postives = 266/522 (50.96%), Query Frame = 1
Query: 22 PGSDSYQLTMLGEMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSPRYVCALQDANRYRS----SMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVFSLSQGHSV*TATPWGRPYSLSLH*L*LLSR*AARQVSNGLCHYAWG-------LTNCVLFQASDC-----SQHIYCGG*VPGTTEVCYIK---DDIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALNAEVF 1530
P ++ + M EM S++E V +L +LP+ + +WVF K +AD + ++ KARLVAQGF+QR GVDY T++PV+ S+R +++++ +G + +D++ AFLNG ++ +V +KQP GF K + H KL KSLYGL+Q R CW L L F +++ + YV G ++A+ V ++++ +D I + +K S A RF++ D+G L ILG++V+++ ++ Q ++ + I K+G++ P++ VDLS + V A++D+ + S VG+L +LS+ TRP++ FAV+ + + +NP EH+ A +R+F +G +G YS + A G W T+ FQ + S+ C E + + +W+R LL DL EP + EDN + I +K+ +++H + Y+ ++QV T+ + Y T LAD+FT+ + E F
Sbjct: 156 PNAERWHEAMQQEMDSLQEHDVWELTELPKDRKAVGCKWVFKVKHNADGSIERH-KARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSR-CWNSVLDEHLKSIGFTQTESDPCIYV--KEEDGNIFVVAIHVDDIILAGKTDEKIAK-VKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYT-ASIIKKYGMENCK-----PVETPVDLSS--KLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKG-----TVNYGLLYSEN-----------ANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNV-NIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQF 645
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM) HSP 1 Score: 245 bits (626), Expect = 1.980e-67 Identity = 170/515 (33.01%), Postives = 274/515 (53.20%), Query Frame = 1
Query: 58 EMGSMKETHVGDLVDLPEGANIIATRWVFSKKLDADRKLVKYNKARLVAQGFTQRAGVDYHATYAPVISVPSLRLMLSIAANKGYAVDTLDISTAFLNGGIDGDV*VKQPPGFVDKDRPHKVWKLRKSLYGLRQFPRICWYMTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETM-IAVCVGNLVIISSSDPSIVRDLKLSFASRFEITDLGSLTQILGIKVVRDRRNKCFFLCQASFVKGTTIAKFGLDFLPAVCTTPMDHTVDLSPSP-RYVCALQDANR---YRSSMVGTLAWLSNWTRPELAFAVHKLQRSQSNPEPEHFEAAERVFSLSQGHSV*TATPW-GRPYSLSLH*L*LLSR*AARQVSNGLCHYAWGLTNCVLFQASDCSQHIYC--GG*VP-----------GTTEVCYIK-----DDIMWLRNLLADLGYPQSAEPTPVVEDNSACIEWAKDMMVSRKNRHFHVSYHLAKEQVNLGTIQMCYTKTSDQLADIFTRALNAEVF 1530
E S+ + D+V LP+G I RWVF K + ++ ++ KARLVA+GF+Q+ G+DY T+APV S+R++LS+AA G + +D+ TAFLNG +D D+ + QP G+VD+D P V KL++SLYGL+Q PR+ W T+ +F+L+ F + + + Y+ ++ G++ + +A+ V +LV+ SSSD ++ K + + RFE+TDLG L LG+++ D + + Q F+K + + KFG+ V TP D + L+ + C +D + YRS+ VG L +L TRP+LA AV L + ++P P H++A +RV Q ATP G +S R+ S G+C Y+ + S + + GG + +TE Y+ +++WL+ L +LG S E + EDN I AK+ ++ +H + YH +E+V G + + Y T+D LAD+ T+A+ A F
Sbjct: 678 ECDSLLKNDTWDVVPLPKGRKAIGCRWVFRVKENQAGEVERF-KARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHPDHVCKLKRSLYGLKQSPRM-WNQTIDDFMLKLGFKKCESDHCVYLKRD---GQDMIFVALYVDDLVLASSSD-ELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLK-SILTKFGMQDSKPV-KTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSA-VGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQ------ATPTHGLEFS--------------REDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAIPATQF 1163 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1200.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1200.4.1 >prot_H-akashiwo_Contig1200.4.1 ID=prot_H-akashiwo_Contig1200.4.1|Name=mRNA_H-akashiwo_Contig1200.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=194bp MTLHNFLLQQNFVRSDYESYFYVCKNPSTGEETMIAVCVGNLVIISSSDPback to top mRNA from alignment at H-akashiwo_Contig1200:252341..253870- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1200.4.1 ID=mRNA_H-akashiwo_Contig1200.4.1|Name=mRNA_H-akashiwo_Contig1200.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1530bp|location=Sequence derived from alignment at H-akashiwo_Contig1200:252341..253870- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1200:252341..253870- >mRNA_H-akashiwo_Contig1200.4.1 ID=mRNA_H-akashiwo_Contig1200.4.1|Name=mRNA_H-akashiwo_Contig1200.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=582bp|location=Sequence derived from alignment at H-akashiwo_Contig1200:252341..253870- (Heterosigma akashiwo CCMP452)back to top |