mRNA_H-akashiwo_Contig120.10.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig120.10.1
Unique NamemRNA_H-akashiwo_Contig120.10.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A7S3Y899_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y899_HETAK)

HSP 1 Score: 594 bits (1532), Expect = 1.540e-208
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 1
Query:    1 VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGGEPLVTFGAALTA 936
            VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGGEPLVTFGAALTA
Sbjct:  327 VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGGEPLVTFGAALTA 638          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: B8C0W0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W0_THAPS)

HSP 1 Score: 164 bits (416), Expect = 8.280e-42
Identity = 110/268 (41.04%), Postives = 159/268 (59.33%), Query Frame = 1
Query:    4 ALGPGNYLRDSWNKFDLLVVFFTNLGIALD-NLTNIEVGG-IASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPD--WCITE-DQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQK 792
            ALG   Y R  WN+FD +VV     G  L   ++N  +   ++S++XXXXXXXXXXXX     L  I  ++V++ P   N+GA+L L+F++YAV GVQL+ LV +  ++   ANFR LG+A+  L RFSTGENWNG+M SL E+  DCD D  Y+    WC+ E D  DC E+NGC AG     YF++F LIV F ++N+F+G+++E+ +   +    G ++  +DL  F   W   D      +  S ++  L    PPLG DE ++
Sbjct: 1120 ALGT-RYFRSRWNRFDFIVVCGLAAGFILKATISNQHLASAVSSLMXXXXXXXXXXXXXXXXPLRAIFNSIVTAIPGIVNIGALLVLLFFVYAVVGVQLYGLVAFQGELNEQANFRTLGSAMLLLLRFSTGENWNGFMWSLFEERADCDLDPVYNETAPWCLNEEDYPDCTEVNGCSAGYSVFAYFYSFTLIVSFVVLNMFVGVVLEAFEKSQE----GDILTPDDLDHFVAVWAEFDPEATWFINASDVQSFLARLPPPLGIDEHER 1382          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A812VYI9_SYMMI (Scn4ab protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VYI9_SYMMI)

HSP 1 Score: 155 bits (391), Expect = 3.280e-39
Identity = 88/254 (34.65%), Postives = 136/254 (53.54%), Query Frame = 1
Query:   22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDE 783
            Y  D WN+FD +VV  TN G+    ++   +G   +++            +  E ++++   L+ + P   N+ A+LFL+F++YAV GVQLFA VEY+ D    ANFR+ G A+ SL RFSTGENW+G+M+ +   +  C +D DYD  +C   D+  C  +NGCG+  +   Y  +F +I+ F  +NLFIG+I+E     D+    G  ++ ED   F + W   D      +    + D +     PLGF E
Sbjct:   55 YFSDMWNRFDFVVVVGTNAGLIFLWISGSNIGMTVTILRTFRIARLLRLMNGAESISQLFNTLLLTLPGLGNIAALLFLLFFIYAVMGVQLFAKVEYSGDHDEHANFRDFGIAMISLLRFSTGENWDGFMYDVGRKSSTCVNDPDYDSAYCGFNDRTGCTPLNGCGSFAIYP-YMLSFTVIITFVFLNLFIGVILEGFSSADES---GKAVKPEDFIRFADHWSHYDPDATCYITVDQLEDFVQTLFAPLGFGE 304          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.550e-37
Identity = 88/252 (34.92%), Postives = 133/252 (52.78%), Query Frame = 1
Query:   22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGF 777
            Y  D WN+FD+ +V  TNLG+A+  +T    G IA+++              LE + ++   L+ + PS  NVGA+LFL F++YAV GVQLFA V     V   ANF+    ++  L RFSTGENWNG+M+ ++ + +DC  +  YDPD C      +C  +NGCG+  +   Y  +F L + +  +NLFIG+I++  D      +   +I++ED   F   W   D     ++    + D L     P GF
Sbjct: 1345 YFIDPWNRFDIFIVIGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFP-YMISFTLTITYVFMNLFIGVILDGFDAAS--ASDHDVIKQEDFARFASHWAEFDPRATCLISVQDLHDFLQTLFAPWGF 1593          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A5D6XXB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXB3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.350e-36
Identity = 106/253 (41.90%), Postives = 149/253 (58.89%), Query Frame = 1
Query:   22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIE--SADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
            Y  DSWN+FD  VV  T + I ++ +T   V  IA +VXXXXXXXXXXXX     + +I++ L  + P   N+ ++LFL+ ++YA  GVQLFA V  + ++ +  NF+    AL  L R +TGE WN  MH L    D C DD +YDP  C   D   CV +NGCG+  VA  YF TF L+V F M+NL I +I+E  SA  +D+E     L E E L  FQ  W  +D+  + ++  + +R L+++ +PPLG
Sbjct: 1283 YFDDSWNRFDFFVVCGTLVSIVIEAVTGASVRSIAMLVXXXXXXXXXXXXXXXXXVRQILLTLYIALPGLSNLASILFLMLFIYATMGVQLFAKVALSDNIDSHQNFQGFLTALLVLLRAATGEAWNYTMHDLAASPDGCVDDPEYDPHMCGFTDVDGCVPLNGCGS-LVAYAYFCTFTLLVTFVMLNLTIAVILEGFSASQEDEE----PLYEPELLEEFQSKWADIDKRAKGLVRVTKLRTLVSILEPPLG 1530          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: K3W515_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W515_GLOUD)

HSP 1 Score: 147 bits (371), Expect = 8.010e-36
Identity = 100/252 (39.68%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIES-ADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
            Y  ++WN+FD  VV  T   + ++ +T   V  IA +V XXXXXXXXXXX       +I++ L  + P   NV ++LFL+ ++YA  GVQ+FA V ++ ++ + ANF++   A+  LFR +TGE W+  MH L    D C DD DYDP+ C   +   C+ +NGCG   +A +YF +F L+V + M+NL I +I+ES +  Q+D+EA   LIE E L  FQ  W  +D+  R ++  + +  L+++  PPLG
Sbjct: 1273 YFNENWNRFDFFVVCGTFGSVLIEAITGTSVRSIAMLVRXXXXXXXXXXXXXXXXXRQILLTLYIALPGLSNVASILFLMLFIYATMGVQMFAKVAFSDNIDSHANFQDFFTAVLFLFRAATGEAWDYCMHDLASRTDGCVDDPDYDPNMCGFNNFEGCIPLNGCG-NSLAFVYFCSFTLLVTYVMLNLTIAVILESFSQSQEDDEA---LIEPELLEEFQFKWADIDKKARGLVRVTKLMTLVSILDPPLG 1520          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A2D4C0A0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0A0_PYTIN)

HSP 1 Score: 146 bits (368), Expect = 2.000e-35
Identity = 106/253 (41.90%), Postives = 144/253 (56.92%), Query Frame = 1
Query:   19 NYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADM-QDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
            +Y  D+WN+FD  VV  T L + ++ LT   V  +A +VXXXXXXXXXXXX        I++ L  + P   N+ ++LFL+ ++YA  GVQLFA V  +S++ A ANF+    A   L R +TGE WN  MH    + D C DD DY+   C   D   C+ +NGCG+  +A  YF TF L+V + M+NL I +I+E   + Q+DEE    LIE E L  FQ  W  +D      +    MR L TL +PPLG
Sbjct: 1252 SYFWDAWNRFDFFVVMGTLLSVVIEWLTGTSVRSLAMLVXXXXXXXXXXXXXXXXXXXXILLTLYIALPGLSNITSILFLMMFIYATMGVQLFAKVALHSNIDAHANFQGFWTAFLFLLRSATGEAWNSCMHDYASNVDGCVDDPDYNASMCGFNDFEGCIALNGCGS-NLAYPYFLTFTLLVTYVMLNLTIAVILEGFSLSQEDEEP---LIEPELLEEFQTKWADIDIEATGFIHIRRMRVLTTLLEPPLG 1500          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A7S2CPL2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPL2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 8.020e-35
Identity = 84/285 (29.47%), Postives = 148/285 (51.93%), Query Frame = 1
Query:    1 VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLME--DADDCDDDLDYDPDWC-ITEDQVD-CVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFE 843
            +ALG   Y+RD+WNKFD ++V  T  GI ++    I +G +AS+V              +  + +I  +++S+ PS  NV  +L +  ++ +   VQLFA +E   D     NF++ G A+ +L RF TGENWNG +H +++  D + C+ D D+  DWC  T + ++ C  +NGCG      I+ + ++ +    + NLF+GI++E+ D  D+ E   + +  E   +F++ W    +   + + K  ++D + +   P+GF           KD +  D+  E
Sbjct:  218 LALGWTQYIRDAWNKFDFIIVIGTLAGIIVEATGGIALGSVASIVRMFRIGRILRLTKSMPEMRRIFESIISALPSMMNVMGLLGIFLFISSALAVQLFAKLELKEDFNEHGNFQDFGVAMLTLVRFLTGENWNGVLHHMVDWNDGESCEVDPDWQEDWCRSTAEWIENCRPLNGCGDRYAVYIFMYAYLFLAPMVVFNLFVGIVLEAFDKNDENE--DATLTTEQCENFRDTWAEFTEEQHLCVSK--LKDFMQILHAPMGFG----------KDYVATDVELE 488          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A3R7JBP2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JBP2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 9.050e-35
Identity = 91/251 (36.25%), Postives = 136/251 (54.18%), Query Frame = 1
Query:   22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
            Y  D WN+FD  VV  T L I ++  T+  +  +A  V      XXXXXX   + + +I++ L  +AP   N+ ++LFL+ ++YA  GVQLFA V  ++++   ANF+N G A   L R +TGE WN  MH L      C DD  YDP+ C   D   C+ +NGCG   ++ ++F +F L+V + M+NL I +I+E   +  ++E    L + E L  FQ  W  +D      +    M  L+ + KPPLG
Sbjct:  179 YFEDQWNQFDFFVVVGTLLSIIVELFTSASIRSLAMTVRVFRVTXXXXXXRASKSIRQILLTLYIAAPGLSNITSILFLMLFIYATMGVQLFAKVMLHNNIDTHANFQNFGRAFLFLLRVATGEAWNYCMHDLAAPTPGCVDDPPYDPNMCGFNDFDGCIPLNGCGT-PISFLFFCSFTLLVTYVMLNLTIAVILEGFSLSHEDE--DPLFDPELLQEFQVKWADIDPKATEFVKVDQMLHLVNILKPPLG 426          
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.220e-34
Identity = 90/273 (32.97%), Postives = 137/273 (50.18%), Query Frame = 1
Query:   22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVE---------YNSDVYAL------------ANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGF 777
            Y  D WN+FD+ +V  TNLG+A+  +T    G IA+++              LE + ++   L+ + PS  NVGA+LFL F++YAV GVQLFA V          +  + YAL            ANF+    ++  L RFSTGENWNG+M+ ++ + +DC  +  YDPD C      +C  +NGCG+  +   Y  +F L + +  +NLFIG+I++  D      +   +I++ED   F   W   D     ++    + D L     P GF
Sbjct:  847 YFIDPWNRFDIFIVMGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVSEPGHLFSSLWTHNGYALIMVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFP-YMISFTLTITYVFMNLFIGVILDGFDAAS--ASDHDVIKQEDFARFASHWAEFDPRATCLISVQDLHDFLQTLFAPWGF 1116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y899_HETAK1.540e-208100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B8C0W0_THAPS8.280e-4241.04Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A812VYI9_SYMMI3.280e-3934.65Scn4ab protein n=1 Tax=Symbiodinium microadriaticu... [more]
D7FVE6_ECTSI1.550e-3734.92Voltage Gated Calcium/Sodium Channel subunit alpha... [more]
A0A5D6XXB3_9STRA4.350e-3641.90Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W515_GLOUD8.010e-3639.68Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4C0A0_PYTIN2.000e-3541.90Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S2CPL2_9STRA8.020e-3529.47Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3R7JBP2_9STRA9.050e-3536.25Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6H5JIB7_9PHAE1.220e-3432.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig120contigH-akashiwo_Contig120:706044..712091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps22071
PFAMsGPHH,Ion_trans
Model size938
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons9
Evalue1.36e-42
EggNOG OGsKOG2301@1|root,KOG2301@2759|Eukaryota,2XE6P@2836|Bacillariophyta
DescriptionVoltage-dependent L-type calcium channel, IQ-associated
Cds size936
COG categoryP
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig120.10.1prot_H-akashiwo_Contig120.10.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig120 706045..712091 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387118.5504286-CDS-H-akashiwo_Contig120:706044..7061861681387118.5504286-CDS-H-akashiwo_Contig120:706044..706186Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 706045..706186 -
1681387118.562539-CDS-H-akashiwo_Contig120:708189..7083021681387118.562539-CDS-H-akashiwo_Contig120:708189..708302Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 708190..708302 -
1681387118.5731778-CDS-H-akashiwo_Contig120:708465..7085511681387118.5731778-CDS-H-akashiwo_Contig120:708465..708551Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 708466..708551 -
1681387118.5846746-CDS-H-akashiwo_Contig120:708750..7088441681387118.5846746-CDS-H-akashiwo_Contig120:708750..708844Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 708751..708844 -
1681387118.593235-CDS-H-akashiwo_Contig120:709190..7092751681387118.593235-CDS-H-akashiwo_Contig120:709190..709275Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 709191..709275 -
1681387118.6018062-CDS-H-akashiwo_Contig120:709662..7097691681387118.6018062-CDS-H-akashiwo_Contig120:709662..709769Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 709663..709769 -
1681387118.6104329-CDS-H-akashiwo_Contig120:710668..7107831681387118.6104329-CDS-H-akashiwo_Contig120:710668..710783Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 710669..710783 -
1681387118.6191952-CDS-H-akashiwo_Contig120:711228..7113681681387118.6191952-CDS-H-akashiwo_Contig120:711228..711368Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 711229..711368 -
1681387118.6348946-CDS-H-akashiwo_Contig120:712037..7120911681387118.6348946-CDS-H-akashiwo_Contig120:712037..712091Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig120 712038..712091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig120.10.1

>prot_H-akashiwo_Contig120.10.1 ID=prot_H-akashiwo_Contig120.10.1|Name=mRNA_H-akashiwo_Contig120.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=312bp
VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVRILRV
CRVFRMFDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFA
LVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDD
LDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGI
IIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLL
TLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGG
EPLVTFGAALTA
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mRNA from alignment at H-akashiwo_Contig120:706044..712091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig120.10.1 ID=mRNA_H-akashiwo_Contig120.10.1|Name=mRNA_H-akashiwo_Contig120.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=6048bp|location=Sequence derived from alignment at H-akashiwo_Contig120:706044..712091- (Heterosigma akashiwo CCMP452)
GTGGCGCTGGGGCCCGGGAACTACCTGCGCGACTCCTGGAACAAGTTCGA CCTGGTGAGCGTGCGGGGGGGCGGCGGCCGAGGGGGGCGGGCGGGCAGGG GGGGGGACGGTCCTGGGACGAAGGGGTCGGCGAGGGCAGGGGCGGGGGGG GCTTTCCTCTCTCCCCCACGCGCCCGCCCGCCTTCTTGCAGTGCATTGTT TGATCGCATCCTGTTGGCGACCTCCTCCGACAAAAAACGCGACCGAACCG TGGCGCGCTGATTGACCAGAGGTGCGATCAGATGACATGCTATGAGTAGG CCTGTTTTGGGCATATTATAATCAAGTGTTTGCACCTCTGAGCGGTGACA ACATGGTGATAAAGTATTCCCTCTGGTTAGTAACCAAGACTTTCTTGGCA ATTGACAACTTGTGTATTCTTACTGGTGCTCATTTACAGTGTGAAAATAT AGGCAGGCCTCCACTGATTTGTGTAGGGATACAGAAGTATAATGATAATG TTGTCAAATTGCAGTATTTGAAAAGGTCCTGTGGTAGTGATGTATATAGT CAGGGGCGAGAGCATGATCGACGAACAGAAAATGGGGCGCAGCAAACGCA CACCTCGATCCGCAAGGCGCCTTCCATGCACAGTCGCCCGCGCGGCGGTG CGGCAGCAGCGGCGGCGACGGCCCACCTCCCCCCCCCTCCCCCCCGGCCC CGGCCTCTGGGGTGGGGGGGCAGCTGGTGGTCTTCTTCACGAACCTGGGC ATCGCGCTGGACAACCTGACGAACATCGAGGTGGGCGGCATCGCCTCGGT CGTGCGCATCCTCCGCGTGTGCCGCGTCTTCCGCATGTTCGACTTCCTCG AGGGCCTGAACAAGTGAGTCCGCCCGGGGGCCGTCCCCCCCCCCGCCCCC GCCGCCGCCGCTTGCCCGGCCCCCTTGGGCGGACTGTTCCAAAACAACAC AGGCGGGCACGGTCTCCGCAACCGCCCGCTGGCGCGCTGATGTGACGCGG TGCTCCCCCCTCCCCCACTCCTCCCGCCCGCATGGCGCGCTGGGTTACCT TACAGAGGCGTCCCCTAAACAAAGGAGGAGTAAAAAATAAAATAAAACAA AGTTTACAACACACACAAACAACTACTTATGTGTACTTCGGAGATGAAAA CTAAGATGAAAACTAAGCAGCGGTGTTGGCGAAGTCTCCCACTGCCGTCC ATTGTTTCCATCGCACACGCGAACCCTTCTCCCTCGGCGGCCGCTCGCGC CCCGCTGCAGCGCCGTTCCCCCCCTCGACTGCCCCCCCTCGCCGGACCCT GCCCCCAGGATCGTGATGGCCCTGGTGTCCTCGGCGCCCTCCTTCTGCAA CGTGGGCGCGGTGCTGTTCCTCGTGTTCTACATGTACGCGGTCTGCGGCG TCCAGCTCTTCGCCCTCGTCGAGGTGCCTCGCCTCTGTGTATTTTTTTCC TTCTACTTTTTAGTGTATACTATCATCAAAACACTGGCCACATTCAGTAT TTACCACGAGATCCCATCTAACAAGTGGGCTCCTTGGCGGTCCAGTTTTT TTGGGGGGGGGGATTGTCAAACTCGGGAAGCTTTTGTGTTTCACTTATGA TGTAAGGCTTTCCGGGTCTGGGCTGGAATTGCCCGAAACTCGAGTCTTTT GCATTGTTAAGCTATTAAACTGAGTGATGAATGGTGACAACTAGAAAATT GGAAACTGATGAAGAAAGAACACCCCCCCTGCCAAAAAAAAACTGACTGG TCTATCCTGAAAGTTTGGCTGCTGGCCTTTTTAAAAAAACGACTGGCCTT TTGGGGACGTCCGACTATTGTTCAACAGACCGTTTCAAACCGTGTTGCTT ACTTTGAGACCGGACTCTAGAATAAGAAAATCATTACTCCTCTTGGACTT CTGTTATCGGAATGTGTATCATTATATGTCCTTGTCAATATGTCCTTGAT CGTCGTTCACATGGGTCTAATGCTGGTGCAACTGTCTCGAGGTACTAGAG TTTTACGCCAGGATTGGATTTCCCTGAAGATGGGCTGTTGTGGAATGGGA CTGGGTTGAACGACCTTCGCCTGCACCCTAGTTGAAGTCCTTTGATATGT ATAGTATCAATATTCTTTGTGGGAATCTAACAAGCGTCCTTTTGAGATAT GTAGTATCAGCATACTCACTGATGATCGAAGGAAAGCGGTTTCTTCATAT TACTGTGAAGCCCGACAACCTCATGAACATCCTCTTATTATTCCGTCGTT GGTGGTCAACTCTACACCTGCATGCTCACGTGCTCACATGTCCGTCTTCC GGGCGTGCCGATGCGATGCCAGTACAACTCGGACGTGTACGCGCTGGCGA ACTTCCGGAACCTGGGCAACGCGCTCTTCAGCCTCTTCCGCTTCAGCACG GGGGAGAACTGGAACGGCTACATGCACAGGTGACCGGACCCCCCCCCCCC CCCACCACCTCCGACCACGGAACAAGTTTCGACCCGGGCAATCTGGAGCG CTTTTTGGCCCATCATAAAATCTGCAGCTCTCTCCCCCCTCGCGTCGCTG TGTGCCTCGCGCTCCGGACCGCTCTGCCCGCACTCTACCTTATGCTGTGG ACCACCCACCCACGTTTCCTTACGTCCCCACCAGCTCTAGCTTGTGCTTC GGACCAACCATCCAAGCACTGCATTCTCTACCTCCTGTTTCTAGGCTCAG TGTGCTGATGTATGTTGCCTCTTCACGATTTGTCAAGCAGCACAACCACT ACCATTCGTAGCATCAGCATGCGCTACCCTCTGTGTATATTTCATTTCAC ACTTGCCATATGGCAGCTTGATGGAAGATGCCGATGACTGCGATGATGAT CTGGATTACGATCCGGACTGGTGCATAACTGAGGACCAAGTTGATTGTGT GGTAAGGAGTGGTGTATCCTTGGCTTTCGATATGGATGGAGCACTATAGT ACAGATTTTTTTTGTTTTCGAGTTTTTAATCGAGAACAGGATTTATGCAG AAAACAGTTCCTTGAAGCAACCATTGTGTGCATGCATAGTATATATTATA GTGTTGAAAGTGAAAGTTCTGAGGACAAAGGCAGTTGCTGAAAATACCAG TTGTCCAAACTTAATGAAGATGACTGCTATTTTATAAAATACCTGTTGCG ACATGTTAAAAAAAAATAAGTATAAATGTGTTTGCGTTACAATACACACA CCAAGTTGAAAAGTCAAAACACCATGATATCAATATCATTTTCCCAGGAA ATCAATGGCTGTGGGGCTGGAGAGGTTGCACGCATTTACTTTTTCACCTT CATTTTAATAGTTCTCTTTTCCATGGTCAATCTTTTCATTGGTGAGTTTC CCTAGATCTGCCGTACAAGTCATACTGCCTCTGTGTACCAAGATATTATT TTTGGAGGCATTTACACCCGCTACATTTAGTTTACTCGACTCATTATATT TCTGTATTTCCATCTCACCAGGTGAATACGCCTTCATCGCCATGCATTTT GAATCTCATCTGTCGATCTACTCCATAAAATATGCTTCAGGTATCATCAT TGAGTCTGCTGATATGCAAGATGACGAAGAAGCACACGGATCTTTGATTG AAGAGGAAGACCTTACCAGTTTCCAGGTATAATGATGTGGCAAATTAGCC GGAAGGATTGAATCGATTTTACATCGTGGCTGGGGTTGACCCTAAAAACA ACATATCATGAAGAACCAGCGCCGCAGAATACCCAGCAGCGCAATAAATG TTTCTACCCCCTGTAACCCTCTCCCAAATCAATTCTCAGGAGGCTTGGCT GAGCTTGGACCAATCAAATCGCATGATATTGCCTAAATCTTACATGAGGG ATCTTCTTACTCTTACCAAACCACCACTAGGGTTCGATGAGCAACAGAAA AGGTGTGTTGCTCGGTGTTTGCATCTCATCGTAGTGCACATCAGTACTGT GGAGGATGATGATGATGGTGGATTTACTTTCAAAACGATCCTTTCACAAC ACTTTCGCGGCCATATAGCCCACAGAACCAGGGCCAGCCTCTGTAGCTTC CACAGTCGACCCCTTCCACATCAGCTGTCCTAAGCTATACCAAAAAACAC CATGGTACTGTTATATGCAAGTACATCTCCGTCAGCACACTCTTCATTTC TAGATGCTTAAAATTGATCACGTTCTTTCTGTGCAGGATCTACCAAGATA GCGAGTGGTTGGCAAATGGTGGCTTCGGATGGGAACTAGTATAAGTATGC GTATCTTTGAATGGTGGAGCGGTGGGCAGTGGCTTGAGTGGGTGGGGCGC TGCGCTGCACCCGCCGTCGTCTTTGGCTTGGCTGGCAAGATATTTCCCCC CACCGGGTTACTTTGTTGCTGCTGGGATGCAGAAGCTGAAAGAGCCTTTT GACGAAGAAACGCCTGGAGTGTTGGAAGTAAGGCAGCACCATGAATCCCT GGACCGTTGTCAAAAAGTTAAATGCTGCAGGGGTATATAGCCAGGGGTGC TGCTCCTGTAGATACCGAGAACCTGCTCTGATGAAGTCAGAATGTGGCTG ACTGGATATATGTACAACGGCTGTGAAATGTGTCACTGGGTAGTGGGATA TGGCATTGTGTTTTGTGTATGAATAAATGTAGATAATATATGTCCATCTT CCCTGGCTCGCTGTGCAAACGATTAACTTCCCGTTTCGTGGGCCGCCCTT GCTTGCGAAGGACTGGGTAACTGTCGAGGCGAGTAGACAGCTGACGCTTC GGCCGATTAGCAGTTGACCAGAAGGGCGTAAGTAGTGCCCTCGGGCGCTA TCTATGCCTTTCCCGGATGAAGCCTCTATCGTTCTTCGATGGATGGTGAA GAATCCCCCTTGGATAGAACTCCGAACAGCACCTGACGGTGATGGGCACT CTCCTGCTCGCCATGGGTTCCGTCAACCGGGATAACCCCGTACTTGTGCG GGCTGTATAGGCTCGGGGGGTAGGCTGGAGGAAGACCAAACTGTTGGCCC CAATCCGCATTGCGGATCCAGATCTAACCACAAATGACAGTTGAGCTTAG TTTTTCCTCAGGCCTATGGACCTTCGTCTGAGGCTCGTGGCCAGCACCTG TGCCGGTTATGATGATGATGCTCAGATTTGTTGTGAACATGGAGGAGAAG GAGGGCAGATTGTTTCCTTAACAGCTGAGATACATGAGGCAACGATGACT AGTGGTGGTGGTGGCCCTGGCCATTGCTGATTTCATTTTTCATTTTTGTT GTGCACTTCTTTCTTCTTCTCATTTCATTCCCCATCTTCAATTGGTTTTC ATTCAGTCAGAGGCAGCCTGAAGAATGCTGGCGGGGGATGGAGAGAGCCG CCAGCCGTGGCTTGTAGTAGCCGAAATGCAACATAGTTGTCATGGACTTA ATGATTTAAAACCTTTGACATATTTGCCTTCTTGGCAGTATGGAGCTATA CTCGCTGATGATGAAAGTGGTTCTCTGTTTAGACCCAACACCCTGCAATA TGTCCATCTATTATGTGAGTTCAGAATGAAGAAGAGAGGAAATGAGAAAA CAACAGTTGGTTTTGAAAAAAAAAATCCTTCCACCCCACCACCTGACTGA ACATAAAACAGCATTCCGTGCTGTTCCGTGCTGTGGTGTGATTTATCTGA TCAAAATACGATGGGTGACCTTTCAGTTAGTAATGTGTAGTCCTGTAGTA TCAACCATAAGTACCTTTCCTGTGATTCATTTCACTCAATGACTGTCAAG ATAGTTTTTTCTGCTTTTATACGCAGCATCATTATCAACAGAACCATTAC AAAACTTGGTTGAAAAGGCCATGCACAGGGATACATAGCATTTGAAACAC CAACAAACTCCTTATCCCCCCCACCCCACCCCCACCCCGCCCGCCGCCGC CGCAGGATGGGGCCCCTGGTGAAAGACCTCATGGTCGAGGACCTCAACTT CGAGACCACGCGCGGCGGCTTCCGCTGCTGCGGGCGCCAGTGGTTCGCGA AGAAGGGTGGGGAGCCGCTGGTCACCTTCGGCGCCGCGCTGACCGCGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig120:706044..712091-

>mRNA_H-akashiwo_Contig120.10.1 ID=mRNA_H-akashiwo_Contig120.10.1|Name=mRNA_H-akashiwo_Contig120.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=936bp|location=Sequence derived from alignment at H-akashiwo_Contig120:706044..712091- (Heterosigma akashiwo CCMP452)
GTGGCGCTGGGGCCCGGGAACTACCTGCGCGACTCCTGGAACAAGTTCGA
CCTGCTGGTGGTCTTCTTCACGAACCTGGGCATCGCGCTGGACAACCTGA
CGAACATCGAGGTGGGCGGCATCGCCTCGGTCGTGCGCATCCTCCGCGTG
TGCCGCGTCTTCCGCATGTTCGACTTCCTCGAGGGCCTGAACAAGATCGT
GATGGCCCTGGTGTCCTCGGCGCCCTCCTTCTGCAACGTGGGCGCGGTGC
TGTTCCTCGTGTTCTACATGTACGCGGTCTGCGGCGTCCAGCTCTTCGCC
CTCGTCGAGTACAACTCGGACGTGTACGCGCTGGCGAACTTCCGGAACCT
GGGCAACGCGCTCTTCAGCCTCTTCCGCTTCAGCACGGGGGAGAACTGGA
ACGGCTACATGCACAGCTTGATGGAAGATGCCGATGACTGCGATGATGAT
CTGGATTACGATCCGGACTGGTGCATAACTGAGGACCAAGTTGATTGTGT
GGAAATCAATGGCTGTGGGGCTGGAGAGGTTGCACGCATTTACTTTTTCA
CCTTCATTTTAATAGTTCTCTTTTCCATGGTCAATCTTTTCATTGGTATC
ATCATTGAGTCTGCTGATATGCAAGATGACGAAGAAGCACACGGATCTTT
GATTGAAGAGGAAGACCTTACCAGTTTCCAGGAGGCTTGGCTGAGCTTGG
ACCAATCAAATCGCATGATATTGCCTAAATCTTACATGAGGGATCTTCTT
ACTCTTACCAAACCACCACTAGGGTTCGATGAGCAACAGAAAAGGATGGG
GCCCCTGGTGAAAGACCTCATGGTCGAGGACCTCAACTTCGAGACCACGC
GCGGCGGCTTCCGCTGCTGCGGGCGCCAGTGGTTCGCGAAGAAGGGTGGG
GAGCCGCTGGTCACCTTCGGCGCCGCGCTGACCGCG
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