mRNA_H-akashiwo_Contig120.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A7S3Y899_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y899_HETAK) HSP 1 Score: 594 bits (1532), Expect = 1.540e-208 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 1
Query: 1 VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGGEPLVTFGAALTA 936
VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGGEPLVTFGAALTA
Sbjct: 327 VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFETTRGGFRCCGRQWFAKKGGEPLVTFGAALTA 638
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: B8C0W0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W0_THAPS) HSP 1 Score: 164 bits (416), Expect = 8.280e-42 Identity = 110/268 (41.04%), Postives = 159/268 (59.33%), Query Frame = 1
Query: 4 ALGPGNYLRDSWNKFDLLVVFFTNLGIALD-NLTNIEVGG-IASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPD--WCITE-DQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQK 792
ALG Y R WN+FD +VV G L ++N + ++S++XXXXXXXXXXXX L I ++V++ P N+GA+L L+F++YAV GVQL+ LV + ++ ANFR LG+A+ L RFSTGENWNG+M SL E+ DCD D Y+ WC+ E D DC E+NGC AG YF++F LIV F ++N+F+G+++E+ + + G ++ +DL F W D + S ++ L PPLG DE ++
Sbjct: 1120 ALGT-RYFRSRWNRFDFIVVCGLAAGFILKATISNQHLASAVSSLMXXXXXXXXXXXXXXXXPLRAIFNSIVTAIPGIVNIGALLVLLFFVYAVVGVQLYGLVAFQGELNEQANFRTLGSAMLLLLRFSTGENWNGFMWSLFEERADCDLDPVYNETAPWCLNEEDYPDCTEVNGCSAGYSVFAYFYSFTLIVSFVVLNMFVGVVLEAFEKSQE----GDILTPDDLDHFVAVWAEFDPEATWFINASDVQSFLARLPPPLGIDEHER 1382
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A812VYI9_SYMMI (Scn4ab protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VYI9_SYMMI) HSP 1 Score: 155 bits (391), Expect = 3.280e-39 Identity = 88/254 (34.65%), Postives = 136/254 (53.54%), Query Frame = 1
Query: 22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDE 783
Y D WN+FD +VV TN G+ ++ +G +++ + E ++++ L+ + P N+ A+LFL+F++YAV GVQLFA VEY+ D ANFR+ G A+ SL RFSTGENW+G+M+ + + C +D DYD +C D+ C +NGCG+ + Y +F +I+ F +NLFIG+I+E D+ G ++ ED F + W D + + D + PLGF E
Sbjct: 55 YFSDMWNRFDFVVVVGTNAGLIFLWISGSNIGMTVTILRTFRIARLLRLMNGAESISQLFNTLLLTLPGLGNIAALLFLLFFIYAVMGVQLFAKVEYSGDHDEHANFRDFGIAMISLLRFSTGENWDGFMYDVGRKSSTCVNDPDYDSAYCGFNDRTGCTPLNGCGSFAIYP-YMLSFTVIITFVFLNLFIGVILEGFSSADES---GKAVKPEDFIRFADHWSHYDPDATCYITVDQLEDFVQTLFAPLGFGE 304
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI) HSP 1 Score: 152 bits (384), Expect = 1.550e-37 Identity = 88/252 (34.92%), Postives = 133/252 (52.78%), Query Frame = 1
Query: 22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGF 777
Y D WN+FD+ +V TNLG+A+ +T G IA+++ LE + ++ L+ + PS NVGA+LFL F++YAV GVQLFA V V ANF+ ++ L RFSTGENWNG+M+ ++ + +DC + YDPD C +C +NGCG+ + Y +F L + + +NLFIG+I++ D + +I++ED F W D ++ + D L P GF
Sbjct: 1345 YFIDPWNRFDIFIVIGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFP-YMISFTLTITYVFMNLFIGVILDGFDAAS--ASDHDVIKQEDFARFASHWAEFDPRATCLISVQDLHDFLQTLFAPWGF 1593
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A5D6XXB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXB3_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.350e-36 Identity = 106/253 (41.90%), Postives = 149/253 (58.89%), Query Frame = 1
Query: 22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIE--SADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
Y DSWN+FD VV T + I ++ +T V IA +VXXXXXXXXXXXX + +I++ L + P N+ ++LFL+ ++YA GVQLFA V + ++ + NF+ AL L R +TGE WN MH L D C DD +YDP C D CV +NGCG+ VA YF TF L+V F M+NL I +I+E SA +D+E L E E L FQ W +D+ + ++ + +R L+++ +PPLG
Sbjct: 1283 YFDDSWNRFDFFVVCGTLVSIVIEAVTGASVRSIAMLVXXXXXXXXXXXXXXXXXVRQILLTLYIALPGLSNLASILFLMLFIYATMGVQLFAKVALSDNIDSHQNFQGFLTALLVLLRAATGEAWNYTMHDLAASPDGCVDDPEYDPHMCGFTDVDGCVPLNGCGS-LVAYAYFCTFTLLVTFVMLNLTIAVILEGFSASQEDEE----PLYEPELLEEFQSKWADIDKRAKGLVRVTKLRTLVSILEPPLG 1530
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: K3W515_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W515_GLOUD) HSP 1 Score: 147 bits (371), Expect = 8.010e-36 Identity = 100/252 (39.68%), Postives = 152/252 (60.32%), Query Frame = 1
Query: 22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIES-ADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
Y ++WN+FD VV T + ++ +T V IA +V XXXXXXXXXXX +I++ L + P NV ++LFL+ ++YA GVQ+FA V ++ ++ + ANF++ A+ LFR +TGE W+ MH L D C DD DYDP+ C + C+ +NGCG +A +YF +F L+V + M+NL I +I+ES + Q+D+EA LIE E L FQ W +D+ R ++ + + L+++ PPLG
Sbjct: 1273 YFNENWNRFDFFVVCGTFGSVLIEAITGTSVRSIAMLVRXXXXXXXXXXXXXXXXXRQILLTLYIALPGLSNVASILFLMLFIYATMGVQMFAKVAFSDNIDSHANFQDFFTAVLFLFRAATGEAWDYCMHDLASRTDGCVDDPDYDPNMCGFNNFEGCIPLNGCG-NSLAFVYFCSFTLLVTYVMLNLTIAVILESFSQSQEDDEA---LIEPELLEEFQFKWADIDKKARGLVRVTKLMTLVSILDPPLG 1520
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A2D4C0A0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0A0_PYTIN) HSP 1 Score: 146 bits (368), Expect = 2.000e-35 Identity = 106/253 (41.90%), Postives = 144/253 (56.92%), Query Frame = 1
Query: 19 NYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADM-QDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
+Y D+WN+FD VV T L + ++ LT V +A +VXXXXXXXXXXXX I++ L + P N+ ++LFL+ ++YA GVQLFA V +S++ A ANF+ A L R +TGE WN MH + D C DD DY+ C D C+ +NGCG+ +A YF TF L+V + M+NL I +I+E + Q+DEE LIE E L FQ W +D + MR L TL +PPLG
Sbjct: 1252 SYFWDAWNRFDFFVVMGTLLSVVIEWLTGTSVRSLAMLVXXXXXXXXXXXXXXXXXXXXILLTLYIALPGLSNITSILFLMMFIYATMGVQLFAKVALHSNIDAHANFQGFWTAFLFLLRSATGEAWNSCMHDYASNVDGCVDDPDYNASMCGFNDFEGCIALNGCGS-NLAYPYFLTFTLLVTYVMLNLTIAVILEGFSLSQEDEEP---LIEPELLEEFQTKWADIDIEATGFIHIRRMRVLTTLLEPPLG 1500
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A7S2CPL2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPL2_9STRA) HSP 1 Score: 143 bits (360), Expect = 8.020e-35 Identity = 84/285 (29.47%), Postives = 148/285 (51.93%), Query Frame = 1
Query: 1 VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLME--DADDCDDDLDYDPDWC-ITEDQVD-CVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGFDEQQKRMGPLVKDLMVEDLNFE 843
+ALG Y+RD+WNKFD ++V T GI ++ I +G +AS+V + + +I +++S+ PS NV +L + ++ + VQLFA +E D NF++ G A+ +L RF TGENWNG +H +++ D + C+ D D+ DWC T + ++ C +NGCG I+ + ++ + + NLF+GI++E+ D D+ E + + E +F++ W + + + K ++D + + P+GF KD + D+ E
Sbjct: 218 LALGWTQYIRDAWNKFDFIIVIGTLAGIIVEATGGIALGSVASIVRMFRIGRILRLTKSMPEMRRIFESIISALPSMMNVMGLLGIFLFISSALAVQLFAKLELKEDFNEHGNFQDFGVAMLTLVRFLTGENWNGVLHHMVDWNDGESCEVDPDWQEDWCRSTAEWIENCRPLNGCGDRYAVYIFMYAYLFLAPMVVFNLFVGIVLEAFDKNDENE--DATLTTEQCENFRDTWAEFTEEQHLCVSK--LKDFMQILHAPMGFG----------KDYVATDVELE 488
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A3R7JBP2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JBP2_9STRA) HSP 1 Score: 142 bits (358), Expect = 9.050e-35 Identity = 91/251 (36.25%), Postives = 136/251 (54.18%), Query Frame = 1
Query: 22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVEYNSDVYALANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLG 774
Y D WN+FD VV T L I ++ T+ + +A V XXXXXX + + +I++ L +AP N+ ++LFL+ ++YA GVQLFA V ++++ ANF+N G A L R +TGE WN MH L C DD YDP+ C D C+ +NGCG ++ ++F +F L+V + M+NL I +I+E + ++E L + E L FQ W +D + M L+ + KPPLG
Sbjct: 179 YFEDQWNQFDFFVVVGTLLSIIVELFTSASIRSLAMTVRVFRVTXXXXXXRASKSIRQILLTLYIAAPGLSNITSILFLMLFIYATMGVQLFAKVMLHNNIDTHANFQNFGRAFLFLLRVATGEAWNYCMHDLAAPTPGCVDDPPYDPNMCGFNDFDGCIPLNGCGT-PISFLFFCSFTLLVTYVMLNLTIAVILEGFSLSHEDE--DPLFDPELLQEFQVKWADIDPKATEFVKVDQMLHLVNILKPPLG 426
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.220e-34 Identity = 90/273 (32.97%), Postives = 137/273 (50.18%), Query Frame = 1
Query: 22 YLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVXXXXXXXXXXXXDFLEGLNKIVMALVSSAPSFCNVGAVLFLVFYMYAVCGVQLFALVE---------YNSDVYAL------------ANFRNLGNALFSLFRFSTGENWNGYMHSLMEDADDCDDDLDYDPDWCITEDQVDCVEINGCGAGEVARIYFFTFILIVLFSMVNLFIGIIIESADMQDDEEAHGSLIEEEDLTSFQEAWLSLDQSNRMILPKSYMRDLLTLTKPPLGF 777
Y D WN+FD+ +V TNLG+A+ +T G IA+++ LE + ++ L+ + PS NVGA+LFL F++YAV GVQLFA V + + YAL ANF+ ++ L RFSTGENWNG+M+ ++ + +DC + YDPD C +C +NGCG+ + Y +F L + + +NLFIG+I++ D + +I++ED F W D ++ + D L P GF
Sbjct: 847 YFIDPWNRFDIFIVMGTNLGLAMLWMTGRSYGSIATIIRTFRIGRVLRLVRGLESMAQLFNTLLLTLPSLGNVGALLFLQFFIYAVMGVQLFATVSEPGHLFSSLWTHNGYALIMVGLRGAVDEQANFQTFWGSMVLLLRFSTGENWNGFMYDMVAEREDCVSNPVYDPDMCGFTSHANCTPLNGCGSWSIFP-YMISFTLTITYVFMNLFIGVILDGFDAAS--ASDHDVIKQEDFARFASHWAEFDPRATCLISVQDLHDFLQTLFAPWGF 1116 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig120.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig120.10.1 >prot_H-akashiwo_Contig120.10.1 ID=prot_H-akashiwo_Contig120.10.1|Name=mRNA_H-akashiwo_Contig120.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=312bp VALGPGNYLRDSWNKFDLLVVFFTNLGIALDNLTNIEVGGIASVVRILRVback to top mRNA from alignment at H-akashiwo_Contig120:706044..712091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig120.10.1 ID=mRNA_H-akashiwo_Contig120.10.1|Name=mRNA_H-akashiwo_Contig120.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=6048bp|location=Sequence derived from alignment at H-akashiwo_Contig120:706044..712091- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig120:706044..712091- >mRNA_H-akashiwo_Contig120.10.1 ID=mRNA_H-akashiwo_Contig120.10.1|Name=mRNA_H-akashiwo_Contig120.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=936bp|location=Sequence derived from alignment at H-akashiwo_Contig120:706044..712091- (Heterosigma akashiwo CCMP452)back to top |