mRNA_H-akashiwo_Contig12.118.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A6G0XWU4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWU4_9STRA) HSP 1 Score: 252 bits (644), Expect = 9.290e-78 Identity = 113/211 (53.55%), Postives = 149/211 (70.62%), Query Frame = 1
Query: 46 NVWLLKNHSFNVTSQNGEDGVVLKIMELLA--DGGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
N WL+K H+FNVTSQ GEDGV+ K+ E++ DG + ++WCVEFGAWDGKHLSNTW L++E W V IE D E+ + Y +P V CI V FEG SL+ IL +P+D D++ ID+DGADYH+W+SL PK++++EFNPTIPN+V ++Q + MSV+ GSSL AL++LGK KGYELV T FN FV + + PLF + DNS
Sbjct: 15 NDWLIK-HAFNVTSQGGEDGVIEKVFEVIGAQDGKESRDRWCVEFGAWDGKHLSNTWKLLHEENWHGVLIEADKERCSRMQQMYINHPHVACINAFVTFEGEQSLERILEREHVPRDLDLISIDVDGADYHIWDSLRAIEPKVVVIEFNPTIPNNVVYIQDKDMSVYHGSSLAALIELGKTKGYELVSTTTFNGVFVKQEYYPLFGMSDNS 224
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: W4H8R0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8R0_9STRA) HSP 1 Score: 251 bits (640), Expect = 4.220e-77 Identity = 115/226 (50.88%), Postives = 157/226 (69.47%), Query Frame = 1
Query: 10 RRKPCSEIVDDANVWLLKNHSFNVTSQNGEDGVVLKIMELLAD-----GGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
R P V+D WL+K+ SFNVTSQ GEDGV+ ++ +++ + G ++WCVEFGAWDGKHLSNTW L++E W V IE D + ++A Y +P+V CI V F+G SLDAIL+ P + D++ IDIDGADYH+W+SL + +PK++++EFNP+IPN+V F+Q + MSV+ GSSL AL++LGK KGYELV T FN FV ++ PLF +PDNS
Sbjct: 6 RNVPVQRKVND---WLIKD-SFNVTSQGGEDGVIERVFDVIGEHEAAVGARPESRWCVEFGAWDGKHLSNTWKLLHEENWHGVLIEADKPRCDQMARMYANHPRVQCINAFVSFDGPMSLDAILARANAPSNLDLISIDIDGADYHIWDSLRSIHPKVVVIEFNPSIPNNVVFIQDKDMSVYHGSSLAALIELGKAKGYELVSTTTFNGIFVQHQYYPLFHMPDNS 227
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A067CXD3_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CXD3_SAPPC) HSP 1 Score: 247 bits (631), Expect = 6.800e-76 Identity = 122/224 (54.46%), Postives = 157/224 (70.09%), Query Frame = 1
Query: 10 RRKPCSEIVDDANVWLLKNHSFNVTSQNGEDGVVLKIMELL-ADGGNTMN--KWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
RR P ++ + N L+KN SFNVTSQ GEDGV+ ++ L A G + +WCVEFGAWDGKHLSNTW L++E GW V IE D ++F E+ A Y P V C+ V FEG SL+AIL+ +P+D D+V IDIDGADYH+W+SL T+ PK++++EFNPTIPN+V F+Q + MSV+QGSSL AL++LGK KGYELV T FN FV R LF + DN+
Sbjct: 5 RRTPPAKRAE--NDHLIKN-SFNVTSQGGEDGVLERVFSRLDAHEGRSSGAGRWCVEFGAWDGKHLSNTWKLLHEEGWRGVLIEADTDRFLEMQAMYAPFPGVACVNQFVTFEGPDSLEAILARHEVPRDVDLVSIDIDGADYHIWDSLRTYAPKVVVIEFNPTIPNNVVFIQDKDMSVYQGSSLAALIELGKTKGYELVSTTTFNGVFVQRELYDLFGIADNA 225
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A1W0A2D1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D1_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.010e-74 Identity = 111/212 (52.36%), Postives = 153/212 (72.17%), Query Frame = 1
Query: 46 NVWLLKNHSFNVTSQNGEDGVVLKIMELLAD---GGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
N WL+++ SFNVTSQ GEDGV+ +I ++L + ++ +WCVEFGAWDGKHLSNTW L+++ W V IE E+F E+ + Y P+VTC+ V F+ SL+AIL T +P D D++ IDIDGADYH+W+SL+ + PK++++EFNPTIPN+V ++Q + MS++QGSSL AL++LGK KGYELV T FN FV + PLF + DNS
Sbjct: 15 NDWLIRD-SFNVTSQGGEDGVLERIFKILNEYEGRESSEGRWCVEFGAWDGKHLSNTWKLLHQEKWHGVLIEATKERFDEMQSMYASFPRVTCLNQFVTFDSDDSLEAILKRTNVPIDLDLISIDIDGADYHIWDSLKQYAPKVVVIEFNPTIPNNVVYIQDKDMSIYQGSSLAALIELGKAKGYELVSTTTFNGIFVLKELYPLFHIEDNS 225
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: UPI0019D92E95 (Uncharacterized protein n=1 Tax=Leptolyngbyaceae cyanobacterium JSC-12 TaxID=864702 RepID=UPI0019D92E95) HSP 1 Score: 237 bits (605), Expect = 4.030e-74 Identity = 110/209 (52.63%), Postives = 150/209 (71.77%), Query Frame = 1
Query: 46 NVWLLKNHSFNVTSQNGEDGVVLKIMELLADGGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
N WLL+ ++TSQ GEDG++ K+ E++ N WCVEFGA DG LSNT++LIN WSSVQIE +P ++ LA+RY + P VTC+ +V FEG ++LD IL T IP D D + IDIDG DY++WESL + PK++++EFNP+IP++V FVQ + V+QGSSLLAL +LGK+KGYEL+ T +N FFV ++ PLF++ DNS
Sbjct: 15 NDWLLQYRK-SITSQLGEDGILEKVFEIIP----AKNHWCVEFGAGDGATLSNTYNLINNQNWSSVQIEANPRSYERLASRYADKPNVTCLNQIVGFEGENTLDKILQTTPIPLDFDFLSIDIDGNDYYIWESLNVYRPKIVVIEFNPSIPHYVFFVQAKDTEVYQGSSLLALQELGKQKGYELIASTEWNGFFVDSQYFPLFEIQDNS 218
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A1V9ZKA5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKA5_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.200e-73 Identity = 113/212 (53.30%), Postives = 154/212 (72.64%), Query Frame = 1
Query: 46 NVWLLKNHSFNVTSQNGEDGVVLKIMELL-ADGG--NTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
N WL+K+ +FNVTSQ GEDGV+ +I +L A G ++ +WCVEFGAWDGKHLSNTW L++E W V IE D ++++E+ Y P V C+ V F+G SL++IL+ +P+D D+V IDIDGADYH+W+SL+T+ PK++++EFNPTIPN+V F+Q + MSV+QGSSL AL++LGK KGYELV T FN FV + LF + +NS
Sbjct: 15 NDWLIKD-AFNVTSQGGEDGVLERIFAILNAHEGRADSAGRWCVEFGAWDGKHLSNTWKLLHEEAWRGVLIEADVDRYREMQTMYAPFPGVHCLNQFVTFDGPDSLESILARHDVPQDVDLVSIDIDGADYHIWDSLQTYVPKVVVIEFNPTIPNNVVFIQDKDMSVYQGSSLAALIELGKAKGYELVSTTTFNGIFVKQELFGLFNITNNS 225
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A0S8EAH2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium SG8_4 TaxID=1703409 RepID=A0A0S8EAH2_9BACT) HSP 1 Score: 235 bits (600), Expect = 2.680e-73 Identity = 115/215 (53.49%), Postives = 148/215 (68.84%), Query Frame = 1
Query: 43 ANVWLLKNHSFNVTSQNGEDGVVLKIMELLADGGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNSPGPAR 687
++ WL + NVTSQNGEDG++ KI+E+L D +WCVEFG WDG+HLSNT+ L+ GWS+V IEGD +FQ+L Y N +V I LV FEG LD+IL +T IP D D++ IDIDG DYHVWE++ + PK++++E+NPTIPN V FVQPR+M V QGSS+LAL +L K K YELV T NA FV ++ LF + DNS G R
Sbjct: 4 SSTWL-NEFAGNVTSQNGEDGIIEKILEVLGDSA----EWCVEFGCWDGRHLSNTYDLVKNKGWSAVLIEGDAHRFQDLLQTYDGNNRVVPINALVGFEGPGKLDSILQSTEIPVDFDLLSIDIDGNDYHVWEAVRDYMPKIVVIEYNPTIPNVVEFVQPRNMRVTQGSSILALANLAKSKDYELVAVTHSNAIFVDSKYFSLFGIEDNSVGAMR 213
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A3R6ZXW4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZXW4_9STRA) HSP 1 Score: 236 bits (603), Expect = 6.430e-73 Identity = 115/226 (50.88%), Postives = 147/226 (65.04%), Query Frame = 1
Query: 10 RRKPCSEIVDDANVWLLKNHSFNVTSQNGEDGVVLKIMELLADGGNTMN-----KWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
RR P S N WL+K HSFNVTSQ GEDGV+ K+ ++ T +WCVEFGAWDGKHLSNTW L+ + W V IE D + ++A Y + +V I V FEG SLD IL P D++ IDIDGADYH+W+SL +PK++++EFNPTIPN+V ++Q + MSV+ GSSL ALV+LGK KGYELV T FN FV +++ PLF + DNS
Sbjct: 5 RRTPPSR--RKVNDWLIK-HSFNVTSQGGEDGVIEKVFSVIGAHETTTGECPDARWCVEFGAWDGKHLSNTWKLLYQENWHGVLIEADKTRCDQMANMYANHSRVQVIHAFVTFEGPMSLDEILQRANAPTRVDLISIDIDGADYHIWDSLHAIHPKVVVIEFNPTIPNNVVYIQDKDMSVYHGSSLAALVELGKSKGYELVSTTTFNGVFVQQQYFPLFNMDDNS 227
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: A0A850RZG3_9PROT (FkbM family methyltransferase n=1 Tax=Mariprofundus sp. KV TaxID=2608715 RepID=A0A850RZG3_9PROT) HSP 1 Score: 234 bits (596), Expect = 8.120e-73 Identity = 106/212 (50.00%), Postives = 145/212 (68.40%), Query Frame = 1
Query: 37 DDANVWLLKNHSFNVTSQNGEDGVVLKIMELLADGGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
D++ WL H+ NVTSQ GEDG++ KI E++ G WCVEFGAWDGK SN+++L+ GW V IE + EKF EL Y PKV C+ V F+ SLD IL+ T IPKD D + ID+DG DYH+W+SL+ H P+LI++EFNP+IPN + F+Q + ++ G+SL A+++LGK KGYEL+C T +N FFVP+ + LF++ DNS
Sbjct: 12 DNSQNWL-SEHASNVTSQTGEDGIIEKIFEIM---GTNEEPWCVEFGAWDGKLYSNSYNLLVNKGWHGVMIEANTEKFGELTTTYQNYPKVHCVNRFVQFQSPDSLDDILNETGIPKDFDFLSIDVDGNDYHIWDSLKEHRPRLIVIEFNPSIPNDIVFIQDPNNDLNHGNSLHAMIELGKAKGYELICTTPWNGFFVPKEYFHLFEIEDNS 219
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Match: UPI001F424820 (FkbM family methyltransferase n=1 Tax=Synechococcus sp. Nb3U1 TaxID=1914529 RepID=UPI001F424820) HSP 1 Score: 233 bits (595), Expect = 1.260e-72 Identity = 110/207 (53.14%), Postives = 149/207 (71.98%), Query Frame = 1
Query: 52 WLLKNHSFNVTSQNGEDGVVLKIMELLADGGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFQELAARYCENPKVTCIQTLVDFEGASSLDAILSATAIPKDPDVVCIDIDGADYHVWESLETHNPKLIIVEFNPTIPNHVAFVQPRSMSVHQGSSLLALVDLGKRKGYELVCCTLFNAFFVPRRHLPLFQLPDNS 672
WLL +H ++TSQ GEDG++ KI E++ G NKWCVEFGA DGK LSNT++LI H WSSVQIE +P++F L++RY E V C+ ++ FEG LD +L T IP+D D++ IDIDG D+HVW SLE + PK++++EFNPTIP++V FVQ + ++V+ G SL ALV+LGK K YEL+C T +N FV +R+ P F + DNS
Sbjct: 16 WLL-SHRKSITSQLGEDGILEKIFEIIPKG----NKWCVEFGAGDGKLLSNTYNLIVNHNWSSVQIEANPDRFAVLSSRYSEREDVYCLNKVISFEGEGKLDDVLCNTPIPEDFDLLSIDIDGNDFHVWSSLEKYRPKVLVIEFNPTIPHYVNFVQKKDINVNHGCSLAALVELGKEKEYELICSTQWNGIFVNKRYYPRFNISDNS 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig12.118.1 >prot_H-akashiwo_Contig12.118.1 ID=prot_H-akashiwo_Contig12.118.1|Name=mRNA_H-akashiwo_Contig12.118.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=219bp MELLADGGNTMNKWCVEFGAWDGKHLSNTWSLINEHGWSSVQIEGDPEKFback to top mRNA from alignment at H-akashiwo_Contig12:5537073..5537947+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig12.118.1 ID=mRNA_H-akashiwo_Contig12.118.1|Name=mRNA_H-akashiwo_Contig12.118.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=875bp|location=Sequence derived from alignment at H-akashiwo_Contig12:5537073..5537947+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig12:5537073..5537947+ >mRNA_H-akashiwo_Contig12.118.1 ID=mRNA_H-akashiwo_Contig12.118.1|Name=mRNA_H-akashiwo_Contig12.118.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=657bp|location=Sequence derived from alignment at H-akashiwo_Contig12:5537073..5537947+ (Heterosigma akashiwo CCMP452)back to top |