mRNA_H-akashiwo_Contig1199.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A7S3Y278_HETAK (Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y278_HETAK) HSP 1 Score: 312 bits (799), Expect = 1.550e-100 Identity = 167/169 (98.82%), Postives = 169/169 (100.00%), Query Frame = 1
Query: 16 MGKVSLILRVVLVTLVALLLLCQNVFAFSRGMMRMAVASPSPLLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMGA 522
MGKVSLILRVVLVTLVALLLLCQNVFAFSRGMMRMAVASPSPLLDAVNAIKNKQ+TATELMRSTLEKIEETDGHVGAFL+VFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMGA
Sbjct: 1 MGKVSLILRVVLVTLVALLLLCQNVFAFSRGMMRMAVASPSPLLDAVNAIKNKQMTATELMRSTLEKIEETDGHVGAFLSVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMGA 169
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A836CQP8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP8_9STRA) HSP 1 Score: 155 bits (392), Expect = 9.820e-42 Identity = 81/133 (60.90%), Postives = 100/133 (75.19%), Query Frame = 1
Query: 121 AVASPSPLLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
A SPSPL DAV A+K+ Q +A L++ +L++I DG V A+L+V GE AL A +D+ +AAGD AKPLLGLPVAVKDNLC G PTTAASK+LEGY+P+Y A AV +L AGAI+VGKVN+DEFAMG
Sbjct: 5 AALSPSPLSDAVRAVKSGQRSAESLVQESLDRIAAADGKVAAYLSVQGEAALEAARVIDNAVAAGDAATLAKPLLGLPVAVKDNLCTQGVPTTAASKILEGYVPSYDATAVRKLREAGAIIVGKVNMDEFAMG 137
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: D8LTD3_ECTSI (Glutamyl tRNA amidotransferase, subunit A, n-terminal region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD3_ECTSI) HSP 1 Score: 138 bits (348), Expect = 1.770e-36 Identity = 67/129 (51.94%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 133 PSPLLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
PSPLL+A A+++ ++++ EL+ L+++EE +G VGAFL+V G A+ A +D K+A G E A PLLG+P+ VKDNLC AG PTTAAS++LEGY P+Y A AV++L+ AG I +GK N+DE+ MG
Sbjct: 7 PSPLLEAAEAVRSGRVSSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKETLALPLLGVPMGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMG 135
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A6H5KXC5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC5_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.480e-35 Identity = 68/129 (52.71%), Postives = 95/129 (73.64%), Query Frame = 1
Query: 133 PSPLLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
PSPLL+A A+++ +I++ EL+ L+++EE +G VGAFL+V G A+ A +D K+A G E A PLLG+P+ VKDNLC AG PTTAAS++LEGY P+Y A AV++L+ AG I +GK N+DE+ MG
Sbjct: 54 PSPLLEAAEAVRSGRISSEELVTQALKRLEEVEGDVGAFLSVQGRAAVDTARSIDRKVAEGCKETLALPLLGVPLGVKDNLCTAGVPTTAASRILEGYRPSYDASAVSKLKLAGGIALGKTNMDEYGMG 182
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: W7TRV8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRV8_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.410e-34 Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = 1
Query: 124 VASPSPLLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
V S + + D V I+ QI+ E+ + TL +IE D +GAFL + G+ A+ +A +D KLA +P + PLLGLP+A+KDN+C AG PTTA SKVL+GY+P+Y A AVARL AAGA++VGK NLDEF MG
Sbjct: 44 VFSSTTIHDMVERIQQGQISVAEVTKQTLLQIEAEDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPMAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMG 175
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A4D9D4K8_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4K8_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.810e-34 Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = 1
Query: 124 VASPSPLLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
+ S S + D V I+ QI+ E+ + +L +IE D +GAFL + G+ A+ +A +D KLA +P + PLLGLPVA+KDN+C AG PTTA SKVL+GY+P+Y A AVARL AAGA++VGK NLDEF MG
Sbjct: 44 IFSSSTIHDMVERIQQGQISVAEVTKQSLLQIEAQDRAIGAFLTLSGDQAMSEARALDEKLAGREPGTSTMPLLGLPVAIKDNICTAGIPTTAGSKVLQGYVPSYDATAVARLRAAGAVLVGKTNLDEFGMG 175
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A2W4KN23_9FIRM (Glutaminyl-tRNA synthase (glutamine-hydrolyzing) (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4KN23_9FIRM) HSP 1 Score: 129 bits (324), Expect = 3.650e-32 Identity = 66/115 (57.39%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 175 QITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
+I+A EL + L++IEE DG +GA+LAV + AL +AE++D++ G+P PL G+PVA+KDNLCV G PTTAAS++LEGY P YTA AV RL AGA+V+GK N+DEFAMG
Sbjct: 20 EISARELTQHFLDRIEELDGTIGAYLAVTADSALAEAEQIDARRRRGEP---LGPLAGIPVAIKDNLCVRGVPTTAASRMLEGYRPPYTATAVERLRQAGAVVLGKTNMDEFAMG 131
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A2W4KEZ5_9FIRM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A2W4KEZ5_9FIRM) HSP 1 Score: 121 bits (303), Expect = 9.100e-32 Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 175 QITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
+++A EL ++ L++I+ DG VGA+L V E ALR+A E D + G+P PL G+PVAVKDNLC+ G PTTAAS++L GY P YTA AV RL AGA+++GK N+DEFAMG
Sbjct: 20 EVSARELTQAFLDRIQALDGTVGAYLTVTAELALRQAREEDERRRRGEP---VGPLSGIPVAVKDNLCIQGVPTTAASRLLAGYRPPYTATAVQRLRRAGAVILGKTNMDEFAMG 131
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A3E0KQV9_9FIRM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (Fragment) n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3E0KQV9_9FIRM) HSP 1 Score: 119 bits (298), Expect = 2.600e-31 Identity = 62/127 (48.82%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 142 LLDAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAG-DPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
+++ A++ ++ A E+ R+ L++I DG + AFL V GE AL +A E+D + G DP PL G+PVAVKDN+C G PTTAAS++L+G++P Y A + RL AAGAI++GK NLDEFAMG
Sbjct: 11 VVETAEAVRRGRLRAEEVTRAHLDRIAAVDGRIRAFLHVTGEAALARAREIDEAVRRGADPG----PLAGVPVAVKDNICTRGVPTTAASRMLQGFVPPYDATVIERLNAAGAIIIGKTNLDEFAMG 133
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Match: A0A0G4G7S4_9ALVE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G7S4_9ALVE) HSP 1 Score: 126 bits (317), Expect = 1.020e-30 Identity = 75/147 (51.02%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 100 SRGMMRMAVASPSPLL-------DAVNAIKNKQITATELMRSTLEKIEETDGHVGAFLAVFGEDALRKAEEVDSKLAAGDPEWAAKPLLGLPVAVKDNLCVAGKPTTAASKVLEGYLPTYTAEAVARLEAAGAIVVGKVNLDEFAMG 519
S G+ V+ PS L + VN I++ + + E +R +L +I +D + AF++VFGE ALR+A E+D +L DPE PLLG+PVAVKDNLC AG PTTA S VL+ Y+P+Y A VARL+AAGAIVVGK N+DEF MG
Sbjct: 59 SEGLPSPPVSEPSLSLSPLDSVSEIVNEIRSGKRSVEETVRLSLGRISASD--LNAFVSVFGEKALREARELDERLRT-DPETRNLPLLGVPVAVKDNLCTAGLPTTAGSAVLQNYIPSYDAACVARLKAAGAIVVGKTNMDEFGMG 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1199.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1199.3.1 >prot_H-akashiwo_Contig1199.3.1 ID=prot_H-akashiwo_Contig1199.3.1|Name=mRNA_H-akashiwo_Contig1199.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=169bp MGKVSLILRVVLVTLVALLLLCQNVFAFSRGMMRMAVASPSPLLDAVNAIback to top mRNA from alignment at H-akashiwo_Contig1199:71807..73298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1199.3.1 ID=mRNA_H-akashiwo_Contig1199.3.1|Name=mRNA_H-akashiwo_Contig1199.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1492bp|location=Sequence derived from alignment at H-akashiwo_Contig1199:71807..73298+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1199:71807..73298+ >mRNA_H-akashiwo_Contig1199.3.1 ID=mRNA_H-akashiwo_Contig1199.3.1|Name=mRNA_H-akashiwo_Contig1199.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=507bp|location=Sequence derived from alignment at H-akashiwo_Contig1199:71807..73298+ (Heterosigma akashiwo CCMP452)back to top |