mRNA_H-akashiwo_Contig1195.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1195.1.1
Unique NamemRNA_H-akashiwo_Contig1195.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A836CR86_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR86_9STRA)

HSP 1 Score: 339 bits (869), Expect = 7.480e-108
Identity = 167/307 (54.40%), Postives = 213/307 (69.38%), Query Frame = 2
Query:  188 EPGEWDSFGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEE--LGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETT-LLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            E   W  F   RH+EFL  FWQK+PLLIR AF +++  ++PD+LAGL+CA+DVESRI+T     G +    + W + HGPF+E  FEE  LG SHWTLLV EV+RH+PEVSDLL    F+F P WR+DD+MISYA + GS+GAHVD+YDVFLLQG+G REWSIE   +   EEE +RL+P++D RVL  +   R+WVL PGDMLYLPPR  H GVSLDD C T S+GFRAP  R+L+  F D V  + V + A+  DPDL +QANPGQ+   A+ R R  VR AV+  L +  FF  W G  V++++
Sbjct:   66 EADVWQGFEASRHEEFLAEFWQKKPLLIRQAFSEFQSPISPDELAGLSCADDVESRIVT-----GGKTPGNSDWAVRHGPFDEGTFEEEELGGSHWTLLVNEVNRHVPEVSDLLQR--FAFVPNWRVDDVMISYAARGGSVGAHVDSYDVFLLQGTGQREWSIEAQPIATAEEEYSRLVPEIDARVLEDFTAARSWVLSPGDMLYLPPRWAHHGVSLDDACTTISIGFRAPSHRDLITFFTDAVASQRVPQTAMYQDPDLTIQANPGQIQRGAIDRARDAVRSAVVAALNDEHFFADWFGAYVTKSR 365          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A6H5JEP9_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEP9_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 8.850e-105
Identity = 157/306 (51.31%), Postives = 212/306 (69.28%), Query Frame = 2
Query:  182 VVEPGEWDSFGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            VV+   W  F  E H  FL  FWQK+PLLIR A   +E ++T D+LAGL+C  DVE+R++T   G    +  G  WE++HGPFEE++F  LG++HWTLLV EV+RH+PEVSDLL    F F P+WR+DD+M+SYAPK GS+G HVDNYDVFLLQG+G R WSIE +   GEEE  RL+ D+D+RVL  +     WVL PGD LYLPPR+ H GVS D++CMTYSVGFRAP  R+L++ F +HVG           DP+L+ Q + G ++  AV++ + +VR+A+L  L++   F+RW G  V++++
Sbjct:   59 VVKAEVWQGFSEEDHDRFLAEFWQKKPLLIRQAIKGFETILTKDELAGLSCCPDVEARVVT---GGRYVDNAGKDWEVEHGPFEEKMFSNLGETHWTLLVNEVNRHVPEVSDLLMK--FQFIPSWRVDDVMVSYAPKGGSVGPHVDNYDVFLLQGAGKRLWSIEDSFTSGEEEEERLVKDIDLRVLTEFKKSEGWVLEPGDALYLPPRLAHYGVSQDEECMTYSVGFRAPSVRDLVSFFGEHVGSTATKPDDFFQDPNLKRQESHGLISREAVSKAKGLVREALLSALDDDVAFDRWFGAQVTRSR 359          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A7S3XI72_HETAK (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XI72_HETAK)

HSP 1 Score: 313 bits (801), Expect = 1.740e-102
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 2
Query:  557 RMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCR 1012
            RMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCR
Sbjct:    1 RMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCR 152          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A2A8D074_9BACT (Cupin n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8D074_9BACT)

HSP 1 Score: 292 bits (748), Expect = 5.020e-91
Identity = 152/291 (52.23%), Postives = 195/291 (67.01%), Query Frame = 2
Query:  227 QEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            + FL+ +WQK+PLLIR A P +E  + P +LAGLAC E VESR+I EE G          WEL  GPF+EE F  L +S WT+LVQEV R IPEV+DLL   AF+F P WR+DD+M+SYAPKDG++GAH+DNYDVFLLQG GTR W      +  EE    ++PDLDVR+L+ +  DR  VL PGDMLYLPPRV H GVSLDD+CMTYS+GFRAP   EL+A F+ +  +R +   A  GDPDL +   PG+++  A+A  R ++R       E+    +RW G  V++ K
Sbjct:   14 ETFLNEYWQKKPLLIRGALPTFESPLEPGELAGLACEEGVESRLILEEGGEKP-------WELRFGPFDEEDFLSLPESKWTVLVQEVDRLIPEVADLLD--AFAFVPKWRIDDVMVSYAPKDGNVGAHIDNYDVFLLQGQGTRRWEWGEEPVQNEE----IVPDLDVRMLKDFEADREAVLEPGDMLYLPPRVAHHGVSLDDECMTYSIGFRAPSHEELIADFMQYAMER-IDPDARYGDPDLTVPDEPGEISADALASIRGLLRSLT----EDDDTIDRWFGAFVTEPK 286          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A1V0DGQ7_9BACT (Cupin n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DGQ7_9BACT)

HSP 1 Score: 284 bits (727), Expect = 6.490e-88
Identity = 149/295 (50.51%), Postives = 194/295 (65.76%), Query Frame = 2
Query:  227 QEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVG----DPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            ++FL  +WQK+PLLIR A P +   ++P  LAGLAC E+V SR++ E  G          W+L +GPF  E FE L ++HW+LLVQEV R++PEV+ LL H  F F P WR+DD+MISYAPK G +G HVDNYDVFLLQG G R W I  T  P EEE   L+PDLDVR+L  + PD  WVL PGD+LYLPPR+PH G++ DD CMTYS+GFRAP   ELL  F+ HV      EHA  G    DPDL+  A PG ++P A+AR R+++ +      ++    +RW G+ +++ K
Sbjct:   15 EQFLAEYWQKKPLLIRGALPGFTSPLSPQDLAGLACEEEVISRLVLERGG-------DYPWQLHYGPFSPEDFEALPETHWSLLVQEVDRYVPEVAALLEH--FRFVPNWRIDDVMISYAPKHGGVGPHVDNYDVFLLQGLGHRRWQIHHT--PVEEE--HLVPDLDVRILADFEPDAEWVLAPGDLLYLPPRIPHNGIAEDD-CMTYSIGFRAPSTVELLEGFLSHV-----IEHANPGRRYADPDLRPPAEPGAISPEALARIRSMITEV----FQDEQTIDRWFGRFMTEPK 286          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A136HNE9_9GAMM (Cupin n=3 Tax=Neptuniibacter TaxID=459520 RepID=A0A136HNE9_9GAMM)

HSP 1 Score: 280 bits (715), Expect = 3.150e-86
Identity = 138/297 (46.46%), Postives = 188/297 (63.30%), Query Frame = 2
Query:  209 FGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            FG      FL  +WQK+PLLIRNAFPD+E  V+PD+LAG+A  E+VESR+I +          G  W+L HGP  EE F +L DSHWTLLVQ V   +PE ++LL +  F F P WR+DD+M+SYA   G +G H DNYDVFL+Q SGTR W +  T   GE+   R   D+ V +L  W P++ W L+PGDMLY+PPR+ H G ++   CMTYSVGFRAP  +E++A F D++     +E     DPDL+ Q NPG++ PAA+ R +A++ D +    + P     W G+ +++ K
Sbjct:    5 FGDISIDTFLREYWQKKPLLIRNAFPDFEAPVSPDELAGMALEEEVESRLIIQSPN-------GKDWKLQHGPLSEETFSDLPDSHWTLLVQSVDHWVPEANELLEY--FRFVPNWRLDDLMVSYATDGGGVGPHYDNYDVFLIQASGTRRWEVGGTY--GEDSPRR--DDVPVMILPEWTPEQTWDLQPGDMLYVPPRLGHNGYAIGGDCMTYSVGFRAPSHQEMMADFTDYLDNITTAEDRY-SDPDLKQQDNPGEITPAALDRVKAIMHDYI----DSPELLSHWFGQFMTEPK 283          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A2E2KLK0_9GAMM (Cupin n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E2KLK0_9GAMM)

HSP 1 Score: 279 bits (714), Expect = 4.440e-86
Identity = 135/297 (45.45%), Postives = 189/297 (63.64%), Query Frame = 2
Query:  209 FGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            FG    + FL+ +WQK+PLLIRNAFPD+E  ++PD+LAG+A  +DVESR+I +         +G  W L HGP  E+ F EL DSHWTLLVQ V   +PE ++LL H  F FAP WR+DD+M+SYA   G +G H DNYDVFL+Q SGTR W +  T     +E +   PD+ V ++  W P++ W L PGDMLY+PPR+ H G ++ D CMTYSVGFRAP  +E+ A F D++ + + S      DPDL+ Q NPG++   A+ R +A++ + +    + P     W G+ +++ K
Sbjct:    5 FGDISVETFLNEYWQKKPLLIRNAFPDFEAPLSPDELAGMALEDDVESRLIIQSA-------DGKDWSLKHGPLTEDTFAELPDSHWTLLVQAVDHWVPEANELLEH--FRFAPNWRLDDLMVSYATDGGGVGPHYDNYDVFLIQASGTRRWEVGGTY----DENSPRRPDVPVMIIPEWTPEQTWDLEPGDMLYVPPRLGHNGYAVGDDCMTYSVGFRAPSHQEMFAGFTDYL-EDITSAEDRYNDPDLKQQNNPGEITTDALDRVKAILHEYI----DSPELLSHWFGQFMTEPK 283          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A2T2UN41_9BACT (Cupin domain-containing protein n=3 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2T2UN41_9BACT)

HSP 1 Score: 278 bits (712), Expect = 1.230e-85
Identity = 145/294 (49.32%), Postives = 191/294 (64.97%), Query Frame = 2
Query:  212 GPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQ 1093
            G     EFLD +WQ+RPL++R+A PD    ++P +LAGLAC E VESRII EE G          WEL  GPF +E F +L ++HWTLLVQEV R IPEV  LL H  F F P WR+DD+M+SYAP  G++G H+DNYDVFLLQG+G R W I T  +  EE    ++PDLDVR+L  + PD  +VL PGD+LYLPPRV H GV+ DDQCMTYSVGFRAP  ++L+A F+ H  +  V   A   DPDL    +PG++   A  + R ++R+ V     +    ++W G+ +++
Sbjct:   12 GERSPAEFLDTYWQERPLVVRDALPDVRSPLSPQELAGLACEEGVESRIILEEGGEHP-------WELREGPFAQEAFLDLPETHWTLLVQEVDRLIPEVGALLDH--FRFLPDWRLDDVMVSYAPTHGTVGPHIDNYDVFLLQGAGHRRWQIGTEPVADEE----IVPDLDVRILADFEPDEEFVLGPGDLLYLPPRVAHHGVATDDQCMTYSVGFRAPRHQDLVANFLQHAIET-VDPDARYSDPDLTPVDHPGELQDGAREKVRGLLRELV----RDDATVDQWFGQFLTR 287          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: A0A7U8C476_NEPCE (JmjC domain-containing protein n=1 Tax=Neptuniibacter caesariensis TaxID=207954 RepID=A0A7U8C476_NEPCE)

HSP 1 Score: 277 bits (708), Expect = 3.380e-85
Identity = 139/297 (46.80%), Postives = 190/297 (63.97%), Query Frame = 2
Query:  209 FGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTK 1099
            FG    + FL  +WQK+PLLIRNAFPD+EP VT D+LAG+A  E+VESR+I +         +G  WEL HGP  EE F EL DSHWTLLVQ V   +PE ++L+    F FAP WR+DD+MISYA   G +G H DNYDVFL+Q +GTR W +       +E++ R   D+ V +L  W  +++W L+PGDMLYLPPRV H G +L D CMT SVGFRAP  +E+ A F +++     +E     DPDL+ QANPG++   A+ R +A++R+ +     +P     W G+ ++++K
Sbjct:    5 FGDISVETFLKEYWQKKPLLIRNAFPDFEPPVTADELAGMALEEEVESRLIIQSA-------DGADWELKHGPLNEETFAELPDSHWTLLVQAVDHWVPEAAELVEQ--FRFAPNWRLDDLMISYASDGGGVGPHYDNYDVFLIQATGTRRWEVGGIF---DEDSPRR-DDVPVMILPEWEAEQSWDLQPGDMLYLPPRVGHNGYALGDDCMTLSVGFRAPSHQEIFAGFTNYLDNITCAEDRY-SDPDLKTQANPGEIDQEAIGRVQAILREYIA----DPALLSHWFGQFMTESK 283          
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Match: UPI000489E49A (cupin domain-containing protein n=1 Tax=Marinobacterium jannaschii TaxID=64970 RepID=UPI000489E49A)

HSP 1 Score: 277 bits (708), Expect = 3.940e-85
Identity = 141/312 (45.19%), Postives = 192/312 (61.54%), Query Frame = 2
Query:  209 FGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLAGLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWTLLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDNYDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVLRPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRLVSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERWLGKLVSQTKA*APGTPSLGTAPRD 1144
            FG    +EFL  +WQK+PLLIRNAFPD+EP V  +++AGLAC  DVESR+I +         +G  W+L HGPF EE F +L DSHWTLLVQ V   +P+ S+L+    F FAP WR+DD+MISYA   G +G H DNYDVFL+Q  G R W +        +E +    +  V +L  W  +++WVL PGDMLYLPPRV H GV++ D CMTYSVGFRAP   E+L   V+ +  +L +E     DPDL++Q+NPG+++P A+A+ R++  + +        F   W G+ +++ K      P L   P D
Sbjct:    8 FGELTAEEFLRDYWQKKPLLIRNAFPDFEPPVAAEEVAGLACEADVESRLIIQS-------PDGKEWKLKHGPFSEESFSDLPDSHWTLLVQAVDHWVPQASELIEQ--FRFAPNWRIDDLMISYAADGGGVGPHYDNYDVFLIQAEGQRRWEVGGIF----DEFSPRRENTPVMILTEWKEEQSWVLNPGDMLYLPPRVGHNGVAVGDGCMTYSVGFRAPSHEEILRGLVEELSGKLKNEDRYQ-DPDLEIQSNPGEISPKAIAQIRSITEEYLCND----SFLSDWFGRYMTEPKY-----PDLEQVPED 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1195.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CR86_9STRA7.480e-10854.40Bifunctional lysine-specific demethylase and histi... [more]
A0A6H5JEP9_9PHAE8.850e-10551.31Bifunctional lysine-specific demethylase and histi... [more]
A0A7S3XI72_HETAK1.740e-102100.00Bifunctional lysine-specific demethylase and histi... [more]
A0A2A8D074_9BACT5.020e-9152.23Cupin n=1 Tax=Longibacter salinarum TaxID=1850348 ... [more]
A0A1V0DGQ7_9BACT6.490e-8850.51Cupin n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0... [more]
A0A136HNE9_9GAMM3.150e-8646.46Cupin n=3 Tax=Neptuniibacter TaxID=459520 RepID=A0... [more]
A0A2E2KLK0_9GAMM4.440e-8645.45Cupin n=1 Tax=Oceanospirillaceae bacterium TaxID=1... [more]
A0A2T2UN41_9BACT1.230e-8549.32Cupin domain-containing protein n=3 Tax=unclassifi... [more]
A0A7U8C476_NEPCE3.380e-8546.80JmjC domain-containing protein n=1 Tax=Neptuniibac... [more]
UPI000489E49A3.940e-8545.19cupin domain-containing protein n=1 Tax=Marinobact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1195contigH-akashiwo_Contig1195:24557..26262 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FJ65
PFAMsCupin_4
Model size1533
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.27e-94
EggNOG OGsCOG2850@1|root,2S0FU@2759|Eukaryota
Ec32 ortholog descriptionSecreted cupin domain protein
Ec32 orthologEc-10_000260.1
DescriptionCupin superfamily protein
Cds size933
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387113.580426-UTR-H-akashiwo_Contig1195:24556..247281681387113.580426-UTR-H-akashiwo_Contig1195:24556..24728Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1195 24557..24728 +
1681387113.6122992-UTR-H-akashiwo_Contig1195:25661..257241681387113.6122992-UTR-H-akashiwo_Contig1195:25661..25724Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1195 25662..25724 +
1681387113.6239176-UTR-H-akashiwo_Contig1195:25897..262621681387113.6239176-UTR-H-akashiwo_Contig1195:25897..26262Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1195 25898..26262 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387113.5953379-CDS-H-akashiwo_Contig1195:24728..256611681387113.5953379-CDS-H-akashiwo_Contig1195:24728..25661Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1195 24729..25661 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1195.1.1prot_H-akashiwo_Contig1195.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1195 24729..25661 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1195.1.1

>prot_H-akashiwo_Contig1195.1.1 ID=prot_H-akashiwo_Contig1195.1.1|Name=mRNA_H-akashiwo_Contig1195.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=311bp
MTTVVEPGEWDSFGPERHQEFLDHFWQKRPLLIRNAFPDWEPLVTPDQLA
GLACAEDVESRIITEEIGLGTEEQEGTLWELDHGPFEEELFEELGDSHWT
LLVQEVSRHIPEVSDLLHHPAFSFAPTWRMDDIMISYAPKDGSIGAHVDN
YDVFLLQGSGTREWSIETTLLPGEEEAARLLPDLDVRVLRGWAPDRAWVL
RPGDMLYLPPRVPHRGVSLDDQCMTYSVGFRAPGERELLALFVDHVGQRL
VSEHALVGDPDLQLQANPGQVAPAAVARCRAVVRDAVLRGLEEPGFFERW
LGKLVSQTKA*
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mRNA from alignment at H-akashiwo_Contig1195:24557..26262+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1195.1.1 ID=mRNA_H-akashiwo_Contig1195.1.1|Name=mRNA_H-akashiwo_Contig1195.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1706bp|location=Sequence derived from alignment at H-akashiwo_Contig1195:24557..26262+ (Heterosigma akashiwo CCMP452)
GTGGTCGTTAGTGGCCATTTTAGTGGCTTCCTTTGTTTGTGCCCGAGTGA AATCCTTTTCAGTACCACATACGTTGCAGAGAAGCTCATGTCTTCTTGGG CTCTGTAATAGAACGCCGGGAAATGATCGACCGACAAGGAGCAGTAAGAA TCACCGCCCGACACTCTTGAAAATGACAACCGTTGTGGAACCGGGGGAGT GGGATAGCTTCGGGCCAGAACGGCATCAGGAGTTCCTTGATCATTTTTGG CAGAAGCGCCCGCTGCTCATTCGCAACGCCTTCCCAGATTGGGAACCTCT TGTGACCCCCGACCAACTAGCAGGCCTTGCGTGCGCAGAGGACGTGGAAT CTCGCATCATCACCGAGGAGATCGGGTTGGGCACAGAGGAGCAGGAGGGT ACCTTATGGGAGCTCGACCACGGCCCGTTCGAAGAGGAGCTCTTCGAAGA GCTGGGCGATTCCCACTGGACCCTGCTGGTCCAAGAAGTCAGCCGGCACA TCCCCGAGGTGTCGGATCTGCTGCACCACCCCGCATTCTCCTTCGCGCCG ACCTGGCGGATGGATGACATCATGATCAGCTACGCGCCCAAGGACGGCTC GATCGGCGCGCACGTTGACAACTACGACGTCTTCCTCCTCCAGGGCTCCG GCACCCGCGAGTGGAGCATCGAGACCACCCTGCTGCCCGGCGAGGAGGAG GCCGCCCGGCTGCTCCCCGACCTCGACGTCCGCGTGCTGCGCGGCTGGGC CCCGGACCGCGCCTGGGTCCTCCGGCCGGGGGACATGCTCTACCTGCCCC CCCGGGTGCCCCACCGCGGGGTCAGCCTGGACGACCAGTGCATGACCTAC TCCGTCGGCTTCCGCGCGCCCGGCGAGCGCGAGCTGCTCGCGCTCTTCGT GGACCACGTCGGCCAGCGGCTGGTCTCCGAGCACGCCCTGGTGGGCGACC CGGACCTGCAATTGCAGGCCAACCCGGGGCAGGTGGCGCCCGCGGCGgtc GCGCGCTGCcgGGCCGTCGTCCGCGACGCCGTGCTGCGCGGGCTGGAGGA GCCGGGGTTCTTCGAGCGGTGGCTGGGCAAGCTGGTCAGCCAAACAAAGG CCTGAGCGCCGGGTACCCCTTCCCTGGGCACGGCGCCGCGCGACTTTCCG CTGGGAGAGCCCCCGGGCGTTCGTGGACGACTTCGCGCGGGCCGCGGCCG CGGGGGAGGCGGGCCCCGTGCTGTACCGCGCCGAGGGGCTGAAGTTCGTC TACCTGGACGAGGAGACGCCGCCGCCAGGAGTGCCGGCGGCGGGGCAGGG GGCGGGCGGCgaggagGAGGAGGAGGCCGGCGGGGCGGCAGGCGAGGAAG GGGAGCTGGTGGCCGCGGGGCTGGAGTTGGAGGAGGGCGGCGAGGATGGG AGCGAGGGGGGCGAGGAGTTGGGAGCGGAGCTGGTGGGTTCGGAAGTGGG CGAAGTGGACGCGGAGGTGGATCTGGGGGGCCTGGCGGGGCCCGGCGTCC TGCTGTGCGTGGACGGGCGGGCCTACCCGCTGCCGCGGGCGGCGGCGGGC CTGGCGGAGGCGGTGTGCGCGCGGCACCGGATGGCGCCCGGGGCGTTCGC GCCGCTGTGGGCGCGGCTGGGCGCGCAGGACCCGCTGGTGTGCGAGTTCA CGAAGCAGCTGCTGGCGGACCTGGTGGACTCGGGGGCGCTGTACCCCGCT GAGGAC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1195:24557..26262+

>mRNA_H-akashiwo_Contig1195.1.1 ID=mRNA_H-akashiwo_Contig1195.1.1|Name=mRNA_H-akashiwo_Contig1195.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=933bp|location=Sequence derived from alignment at H-akashiwo_Contig1195:24557..26262+ (Heterosigma akashiwo CCMP452)
ATGACAACCGTTGTGGAACCGGGGGAGTGGGATAGCTTCGGGCCAGAACG
GCATCAGGAGTTCCTTGATCATTTTTGGCAGAAGCGCCCGCTGCTCATTC
GCAACGCCTTCCCAGATTGGGAACCTCTTGTGACCCCCGACCAACTAGCA
GGCCTTGCGTGCGCAGAGGACGTGGAATCTCGCATCATCACCGAGGAGAT
CGGGTTGGGCACAGAGGAGCAGGAGGGTACCTTATGGGAGCTCGACCACG
GCCCGTTCGAAGAGGAGCTCTTCGAAGAGCTGGGCGATTCCCACTGGACC
CTGCTGGTCCAAGAAGTCAGCCGGCACATCCCCGAGGTGTCGGATCTGCT
GCACCACCCCGCATTCTCCTTCGCGCCGACCTGGCGGATGGATGACATCA
TGATCAGCTACGCGCCCAAGGACGGCTCGATCGGCGCGCACGTTGACAAC
TACGACGTCTTCCTCCTCCAGGGCTCCGGCACCCGCGAGTGGAGCATCGA
GACCACCCTGCTGCCCGGCGAGGAGGAGGCCGCCCGGCTGCTCCCCGACC
TCGACGTCCGCGTGCTGCGCGGCTGGGCCCCGGACCGCGCCTGGGTCCTC
CGGCCGGGGGACATGCTCTACCTGCCCCCCCGGGTGCCCCACCGCGGGGT
CAGCCTGGACGACCAGTGCATGACCTACTCCGTCGGCTTCCGCGCGCCCG
GCGAGCGCGAGCTGCTCGCGCTCTTCGTGGACCACGTCGGCCAGCGGCTG
GTCTCCGAGCACGCCCTGGTGGGCGACCCGGACCTGCAATTGCAGGCCAA
CCCGGGGCAGGTGGCGCCCGCGGCGgtcGCGCGCTGCcgGGCCGTCGTCC
GCGACGCCGTGCTGCGCGGGCTGGAGGAGCCGGGGTTCTTCGAGCGGTGG
CTGGGCAAGCTGGTCAGCCAAACAAAGGCCTGA
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