mRNA_H-akashiwo_Contig1191.6.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A6V3C3H6_HETAK (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A6V3C3H6_HETAK) HSP 1 Score: 429 bits (1104), Expect = 4.920e-152 Identity = 215/219 (98.17%), Postives = 216/219 (98.63%), Query Frame = 1
Query: 1 MAKSVAFAALAGLAGVSAFQQAAPVQNVASGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANVQ 657
MAKSVAFAALAGLAGVSAFQQ AP+QN SGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANVQ
Sbjct: 1 MAKSVAFAALAGLAGVSAFQQPAPIQNAVSGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANVQ 219
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A7S2V5J8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5J8_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.000e-83 Identity = 130/218 (59.63%), Postives = 164/218 (75.23%), Query Frame = 1
Query: 1 MAKSVAFAALAGLAGVS-AFQQAAPVQNVASGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFAN 651
MAKSVA AA+ GL G + FQ AP+ +V SG+SK++MMAEMSK+VPFL+KP LDG++AGD GFDPL+LSEI DVG+DLYW+REAE+KHGRVAM+A AG+ + + GS LPG P A G SQMDVFW +W + P +G L F I+E+ SG AIT GRE+G R PGD+G+DP ++ + D LKE++NGRLAM AAAG ILQG+TTH+ F N
Sbjct: 1 MAKSVAVAAMVGLVGSALGFQAPAPLTSVTSGSSKVSMMAEMSKSVPFLSKPPLLDGTLAGDEGFDPLRLSEINDVGIDLYWLREAEMKHGRVAMMAAAGVMWVELFGS-LPGMPSAEGASQMDVFWTLWAEKPALVGASLVFFTIIELTSGYAITAGREAG-REPGDWGYDPTGLTRNEKTKKDLQLKEIRNGRLAMFAAAGQILQGLTTHQPAFEN 216
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: K8YPQ7_NANGC (Light-harvesting complex I chlorophyll a/b binding protein 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YPQ7_NANGC) HSP 1 Score: 230 bits (586), Expect = 3.580e-73 Identity = 115/185 (62.16%), Postives = 136/185 (73.51%), Query Frame = 1
Query: 100 KMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
+ TMMAE SK++PFL KPKNLDGSMAGD GFDPL LSEI +VG+DLYW+REAELKH R+ M+A AGI F G PGFP KSQMD FW V+ + P +G L I+EV+SG+A T+GR++GDRAPGDY FDPL P K D LKEVKNGRLAM+AAAGMILQGV+TH+ N+
Sbjct: 36 RTTMMAERSKSLPFLMKPKNLDGSMAGDVGFDPLGLSEINEVGIDLYWLREAELKHCRLGMMAAAGILFVEAVGPA-PGFPST--KSQMDAFWTVYAEKPSLVGAALVAIAILEVISGVATTQGRQNGDRAPGDYNFDPLGFGKDPAKFKDLQLKEVKNGRLAMIAAAGMILQGVSTHQGALQNL 217
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A6S8A8I0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8A8I0_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.830e-69 Identity = 114/190 (60.00%), Postives = 136/190 (71.58%), Query Frame = 1
Query: 82 VASGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFAN 651
+ S S + M AEMSK++PFL KP LDG+MAGD GFDPL LSEI+DVG+DLYW+REAELKH RVAMLA AGI F + G LPG+P A G+SQ DVFW E+HP I IVEV++G+A+T+GRESG RAPGDYGF+P+ T A KEV NGRLAM A AG++LQGVTTH+ AN
Sbjct: 23 IVSSRSGIVMKAEMSKSMPFLEKPALLDGTMAGDKGFDPLGLSEIDDVGIDLYWLREAELKHCRVAMLAFAGIVFVELFGP-LPGWPFAEGRSQCDVFWDTVEEHPNAIVSAFLALGIVEVITGVAVTQGRESGKRAPGDYGFNPMDFKVTESMAE----KEVSNGRLAMWAMAGILLQGVTTHKPALAN 207
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A7S2SRG9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRG9_9STRA) HSP 1 Score: 219 bits (557), Expect = 7.390e-69 Identity = 113/197 (57.36%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 64 AAPVQNVASGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
AA A A + + SKA+PFL +P LDGSMAGD GFDPL LSEI DVGLDLYWMREAELKHGRVAMLA AG+ F GS LPG+P AGK+QMD+FW VWE P + G L ++E VSG+AITKGRESG R GD+GF+P+K LKE++NGRLAM A AGMI+QG+TT N+
Sbjct: 23 AAAFAPTAVPAKRSVALGAKSKAIPFLEQPAQLDGSMAGDEGFDPLGLSEINDVGLDLYWMREAELKHGRVAMLAAAGVLFVETIGS-LPGWPQGAGKNQMDIFWDVWEQKPNYVVGALCFITVLETVSGVAITKGRESGLREAGDFGFNPMKFKVDESMK----LKEIRNGRLAMWAVAGMIMQGLTTESGCLGNL 214
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A6T7D3U9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7D3U9_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.390e-68 Identity = 110/192 (57.29%), Postives = 133/192 (69.27%), Query Frame = 1
Query: 79 NVASGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
+V S + +A SKA+PFL +PK LDGS+AGD GFDPL LSEIE +G DLYWMREAELKH RVAMLA G+ F GS +PGFP+ G+SQMDVFW VW +HP I L F ++EV+SG+A T GRESG R GD+GF+PL T E KE+ NGRLAM+AAAGMI+QG+TTH N+
Sbjct: 22 SVKSSSRTAVTLAAKSKALPFLDQPKKLDGSLAGDAGFDPLGLSEIEGIGADLYWMREAELKHARVAMLATVGVLFVEGCGS-MPGFPEGKGQSQMDVFWDVWAEHPNYIAAALTFFTVIEVISGVATTAGRESGLRDAGDFGFNPLGFKDTMEMRT----KEIANGRLAMLAAAGMIMQGMTTHNGCLTNL 208
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A835Z6T4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T4_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.580e-68 Identity = 114/218 (52.29%), Postives = 149/218 (68.35%), Query Frame = 1
Query: 1 MAKSVAFAALAGLAGVSAFQQAAPVQNVASGASKMTMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
M K+ A ALAG G +AF A P+ +S M+M+A SK++PFL KP+ LDGS+ GD GFDPL LS +++GLDLYW REAE+KHGR+AMLA AG+ F GS LPGFP +GK QMD+FWQV+ + P +G G+ I+E +SG+AIT GR+ G R GD+ DP + + P K A L+E+KNGRLAM+A+ GMI QG+TTHE N+
Sbjct: 1 MMKAAAVLALAG--GAAAFMPATPLAGAVKSSSTMSMVA--SKSLPFLPKPEKLDGSLPGDVGFDPLNLSATDELGLDLYWFREAEVKHGRIAMLAVAGVLFCDQVGS-LPGFP--SGKDQMDLFWQVFAEKPNVVGAGVVAVSILEFISGIAITAGRKDGSREAGDFNLDPFNVRADPAKKATAQLQEIKNGRLAMLASMGMIAQGMTTHEGALDNI 211
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: B7G9B9_PHATC (Protein fucoxanthin chlorophyll a/c protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9B9_PHATC) HSP 1 Score: 213 bits (541), Expect = 2.100e-66 Identity = 104/183 (56.83%), Postives = 131/183 (71.58%), Query Frame = 1
Query: 106 TMMAEMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
++ AE SK++PF+ +P LDGSMAGD GFDPL LS IE VG+DLYW+REAE+KH RVAM+A AG+ + + G PG A KSQ D FWQ+W+ HP I G +VE+++G+AIT GRESG RAPGD+G DPLK+ + P K Y+L EVKNGRLAM AAAG ++Q TTHE F N+
Sbjct: 30 SLNAERSKSLPFMNRPDLLDGSMAGDVGFDPLGLSTIEGVGVDLYWLREAEIKHCRVAMMAVAGVLWVELFGPA-PGCEMATAKSQTDAFWQLWQAHPQYIAFGFIMTGLVEMITGIAITTGRESGQRAPGDFGLDPLKIKNNPAKWEKYSLNEVKNGRLAMFAAAGQLMQSWTTHEGAFENL 211
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: A0A7S3ZSM0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSM0_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.810e-65 Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 1
Query: 124 SKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDVGLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
S ++PFL +PKNLDGSMAGD GFDPL LSEI+D+G+DLYW+REAELKHGRVAMLA G+ + G LPG+P+A G+SQMDVFW WE+HP I G+ +E++SG+A T GR +G+RAPGD+G +PL+ T E ALKE+K+GRLAM A G I G+ THE F N+
Sbjct: 31 SLSMPFLEQPKNLDGSMAGDVGFDPLGLSEIDDLGVDLYWLREAELKHGRVAMLAATGVIWVEAFGP-LPGWPEADGRSQMDVFWDAWEEHPNAICAGIVFITAIELISGVATTMGRSTGERAPGDFGLNPLQFEITEE----LALKEIKHGRLAMWAVMGQIGAGLMTHEPAFGNL 202
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Match: D8LDT7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT7_ECTSI) HSP 1 Score: 207 bits (528), Expect = 2.370e-64 Identity = 117/217 (53.92%), Postives = 147/217 (67.74%), Query Frame = 1
Query: 22 AALAGLAGVSAFQQAAPVQNV----ASGASKMTMMA-EMSKAVPFLTKPKNLDGSMAGDNGFDPLKLSEIEDV-GLDLYWMREAELKHGRVAMLACAGIFFTTVHGSILPGFPDAAGKSQMDVFWQVWEDHPFNIGGGLFGFFIVEVVSGLAITKGRESGDRAPGDYGFDPLKMSSTPEKAADYALKEVKNGRLAMMAAAGMILQGVTTHESIFANV 654
A LA AG SAF + N +S +SK +MMA + SK++P L +P LDGSMAGD GFDPL LS I + G DLYWMREAELKHGRVAMLA G+ + GS LPGFP +G +QM +FW+VW + P + G+ I E++SG+A + G+ESGDRAPGD+G DPLK+ PEK A L+E+KNGRLAM AAAGMI+QG+TT N+
Sbjct: 7 ATLALAAGSSAFVAPSVPLNTRVASSSASSKTSMMAGDRSKSLPMLPQPPLLDGSMAGDVGFDPLGLSSIAGLAGADLYWMREAELKHGRVAMLATVGVLWCDAFGS-LPGFP--SGVNQMKLFWEVWAEKPQYVAAGIIFCGIAEIISGIATSLGQESGDRAPGDFGIDPLKLDKNPEKKAKLELQEIKNGRLAMWAAAGMIMQGLTTDGGAMDNL 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1191.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1191.6.1 >prot_H-akashiwo_Contig1191.6.1 ID=prot_H-akashiwo_Contig1191.6.1|Name=mRNA_H-akashiwo_Contig1191.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=220bp MAKSVAFAALAGLAGVSAFQQAAPVQNVASGASKMTMMAEMSKAVPFLTKback to top mRNA from alignment at H-akashiwo_Contig1191:233643..234302- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1191.6.1 ID=mRNA_H-akashiwo_Contig1191.6.1|Name=mRNA_H-akashiwo_Contig1191.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=660bp|location=Sequence derived from alignment at H-akashiwo_Contig1191:233643..234302- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1191:233643..234302- >mRNA_H-akashiwo_Contig1191.6.1 ID=mRNA_H-akashiwo_Contig1191.6.1|Name=mRNA_H-akashiwo_Contig1191.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=660bp|location=Sequence derived from alignment at H-akashiwo_Contig1191:233643..234302- (Heterosigma akashiwo CCMP452)back to top |