mRNA_H-akashiwo_Contig118.19.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig118.19.1
Unique NamemRNA_H-akashiwo_Contig118.19.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI00053F30A2 (protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F30A2)

HSP 1 Score: 154 bits (390), Expect = 2.190e-41
Identity = 109/292 (37.33%), Postives = 161/292 (55.14%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDM 879
            Y  G+  +   G + Y+AKV KIE +K     K  +YF+HYLGWN  WD+WV    +  I  +N  K+    K   LGA        K  K+  SA +  K   +   ++     + AK K  K   + S+   KL KI+M   LK+QL  +W+ +SQ   ++ LV LPRSP V+DIL++++E  +RK      +  +   GLR +FD+ALPL LLYK ER+QY +     +   PS VYGAEH LRLFV L + L   ++ ++   + LQ+K+   ++FL K+Q +FFL +
Sbjct:   33 YSEGEKVLAYHGPRIYEAKVQKIETRK-----KEWRYFVHYLGWNKNWDEWVSADRLMKITDENIQKQLALEKK--LGAD-------KHHKSGRSAQTKPKDAKL---DKEETKNNVAKGKKRKTDEKESISAEKLVKIQMPSTLKKQLVDDWEFVSQ---KDKLVKLPRSPNVDDILKKYLEYRTRKDGTMTDSIAEILNGLRCYFDKALPLMLLYKKERQQYHEAV--TNNVSPSTVYGAEHLLRLFVKLPELLAYVNMEEETMTR-LQQKLVDFIRFLQKNQSTFFLSV 301          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI000B78B1B0 (protein MRG1-like isoform X1 n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B1B0)

HSP 1 Score: 151 bits (382), Expect = 3.670e-40
Identity = 103/292 (35.27%), Postives = 161/292 (55.14%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDM 879
            Y  G+  +   G + Y+AK+ K E++K     K  +YF+HYLGWN  WD+WV +  +  I  +N  K++   K +       +  S +  K + S  + V  E V          + AK K  K   + S    KL KI++   LK+QL  +W+ ++Q   ++ LV LPRSPTV+D+L++++E  +RK      +  +   GLR +FD+ALPL LLYK ER+QY +     +   PS VYGA+H LRLFV L + L   ++ ++   + LQ+K+   L+FL K+Q +FFL +
Sbjct:   34 YAEGEKVLAYHGPRIYEAKIQKAEIRK-----KEWRYFVHYLGWNKNWDEWVGMDRLMKITEENIQKQQALEKKQGADKHHRSGRSAQ-TKPKGSTDAKVDKEDV--------KSNVAKGKKRKGDEKDSASAEKLVKIQIPSPLKKQLVDDWEFVTQ---KDKLVKLPRSPTVDDVLKKYLEYRTRKDGTITDSIAEILNGLRCYFDKALPLMLLYKKERQQYHEAV--TNNASPSTVYGADHLLRLFVKLPELLAYVNMEEETMTR-LQQKLVDFLRFLQKNQSTFFLSV 305          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A803NFC0_CANSA (MRG domain-containing protein n=8 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NFC0_CANSA)

HSP 1 Score: 151 bits (381), Expect = 4.790e-40
Identity = 101/293 (34.47%), Postives = 163/293 (55.63%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSK----LKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            Y  G+  +   G + Y+AKV K E+ K     K  ++F+HYLGWN  WD+WV    +  +  +N  K+++  K + +          K VK+  SA +  KS +    E+     +  K K  K       +G+     +KI++   L++QL  +W  ++Q   ++ LV LPRSPTV++IL ++++  S+K + T  +  +  +G+R +FD+ALP+ LLYK ERKQ+ D+  D     PS +YGAEH LRLFV L + L    + ++   + LQ+K+T  L+FL K+Q +FFL
Sbjct:   28 YTEGEKVLAYHGPRIYEAKVQKAELMK-----KEWKFFVHYLGWNKSWDEWVGADRLMKLTEENVLKQQELDKKQGVD---------KNVKSGRSAHTRPKSSADVKAEKEDTKTNVVKTKKRKTESVAEKEGASSEKSVKIQIPSTLRKQLVDDWDFVNQ---QDKLVKLPRSPTVDEILSKYLDYRSKKENTTSDSLAEILKGIRCYFDKALPVMLLYKKERKQFQDVVLDDMS--PSNIYGAEHLLRLFVKLPELLAYVSIEEETLTR-LQQKLTDFLKFLQKNQSTFFL 300          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A2P5AFP4_PARAD (MRG n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AFP4_PARAD)

HSP 1 Score: 150 bits (378), Expect = 1.330e-39
Identity = 102/290 (35.17%), Postives = 167/290 (57.59%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            +  G+  +   G + Y+AKV K E++K     K  +YF+HYLGWN  WD+WV +  +     +N  K++   K + +     +  S +  K + SA   V+ E V   + ++A G   K K +  + + ++   KL K ++   LK+QL  +W+ ++Q   ++ LV LPRSPTV+DIL ++++  S+K ++T  +  +   G+R +FD+ALP+ LLYK ERKQ+ D+  D     PS VYGAEH LRLFV L + L   ++ ++   + LQ+K+   L+FL K+Q + FL
Sbjct:   28 FSEGEKVLAYHGPRIYEAKVQKAELRK-----KEWKYFVHYLGWNKNWDEWVGVDRLMKHTEENVVKQQALDKKQGVDKNPKSGRSAQ-TKPKSSADVKVEKEDV---KSNAAKG--KKRKNDSGAEKDNVSSDKLVKFQIPSTLKKQLVDDWEFVNQ---QDKLVKLPRSPTVDDILAKYLDYRSKKENMTSDSVAEILRGIRCYFDKALPVMLLYKKERKQFHDVVQDDVS--PSNVYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQKLIDFLKFLQKNQSTLFL 300          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A1Y1I2K4_KLENI (MRG domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2K4_KLENI)

HSP 1 Score: 148 bits (374), Expect = 3.430e-39
Identity = 102/287 (35.54%), Postives = 152/287 (52.96%), Query Frame = 1
Query:   22 GDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESRKLDI---TPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            G+  +   G   Y+AK  K E +K     K  +Y++HYLGW+  WD+WV+ K +  I   N +K+KK  +       A+      KV + E      K           A  ++AK +  +  V         K+ +   LK+QL  +W+ +++    N LVPLPRSPTVNDILQ+++E+R       T  A  +  +GLR +FD+ALP  LLY  ER Q++D+  + S   PS +YGAEH LRLFV L + L  +++ ++     LQ K+   L+FL K+Q SFFL
Sbjct:   36 GEKVLAYHGPLIYEAKTQKAEFRK-----KEWRYYVHYLGWSKSWDEWVDTKRLLKITDANIAKQKKVHRE------AAEKRGKSKVGSSER-----KXXXXXXXXXXXADANEAKEEEPEQVV---------KLPLSSHLKKQLIDDWKHVTE---NNKLVPLPRSPTVNDILQKYLEARTKKASSETDDATGEVVDGLRSYFDKALPAMLLYSQERDQFNDVIPEESDISPSNIYGAEHLLRLFVKLPELLVYTNM-EEASMAQLQAKLIDFLKFLQKNQTSFFL 293          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A443NHP7_9MAGN (Protein MRG1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NHP7_9MAGN)

HSP 1 Score: 149 bits (375), Expect = 4.040e-39
Identity = 102/291 (35.05%), Postives = 157/291 (53.95%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCG--GEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFV--ESRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            + VG+  +   G   Y AKV KIE    +      +Y++HYLGWN  WD+WV+   +  +  +N  K+K+  K  N  A  +       +K   S  ++V  E +    G      GD    + +  S +       +KI+  L LK+QLA +W+ ++Q      LV LPR+P V+ IL++++   S+K D+   + E+   G+R +FD+ALP+ LLYK ER+QYD+   D     PS VYGAEH LRLFV L + L   ++ +K+    LQ+K+   L+FL K+Q +FFL
Sbjct:   32 FSVGERVLAHHGPLLYGAKVKKIEYLDNQQ-----RYYVHYLGWNKNWDEWVDGDRLMKLTEENVQKQKELEK--NFSADKNPKLGRSPIKPRSSNDTNVDKEDLQNYVGRSKKRKGDYGIEEEDTGSTK-----MLMKIQFPLTLKKQLADDWEFVTQL---GKLVKLPRNPNVDGILKKYLAYRSKKNDMAAESVEEILNGMRNYFDKALPVMLLYKKERRQYDEAIVD--NVSPSAVYGAEHLLRLFVKLPELLAYVNM-EKEALSQLQQKLQDFLKFLQKNQSAFFL 304          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: K7MM16_SOYBN (MRG domain-containing protein n=20 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=K7MM16_SOYBN)

HSP 1 Score: 147 bits (372), Expect = 1.040e-38
Identity = 101/293 (34.47%), Postives = 162/293 (55.29%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSV---RPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            Y  G+  +   G + Y+AKV K E++K +      +YF+HYLGW+  WD+WV  + +     +N  K++   K +N+          K VK+  S+    K  +    ++     + +K K  K      + S    KL KI++   LK+QL  +W  ++Q   ++ LV LPRSPTV++I+ +++E  S+K  + P +  +  +G+R +FD+ALP+ LLYK ERKQY+D   D     PS +YGAEH LRLFV L + L    + ++   + LQ+K+   L+FL K+Q +FFL
Sbjct:   29 YSEGEKVLAYHGPRIYEAKVQKTEIRKSEW-----KYFVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNVD---------KNVKSGRSSQGKAKISTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPATLKKQLVDDWDSVTQ---QDKLVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYNDSIVD--NVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNR-LQQKLLDFLKFLQKNQSTFFL 301          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: A0A2P6RNS4_ROSCH (Putative chromatin remodeling & transcriptional activation CHROMO-DOMAIN family n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6RNS4_ROSCH)

HSP 1 Score: 146 bits (369), Expect = 2.880e-38
Identity = 104/293 (35.49%), Postives = 159/293 (54.27%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKL----KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESR--KLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            Y  G+  +   G + Y+AKV K E++K +      +YF+HYLGWN  WD+WV +  I     +N  K++   K + +          K  K+  SA +  KS +    E+     + AK K  K       D   L    KI++ LAL++QL  +W+ + +   ++ LV LPRSPTV+DILQ++++ R  K         +  +G+R +FD+ALP+ LLYK ERKQY D   D     PS +YGAEH LRLFV L + L   ++ ++   + LQ+++   L+FL K+Q +FFL
Sbjct:   29 YSEGEKILAYHGPRIYEAKVQKAEIRKNEW-----RYFVHYLGWNKNWDEWVGVDRILKYTEENILKQQALDKKQGVD---------KNTKSGRSAHTKPKSSADAKVEKEDQKNNVAKGKKRKNDSGAEKDSVTLEKLVKIQIPLALRKQLVEDWEFVCE---QDKLVKLPRSPTVDDILQKYLDYRTKKDGKLTDPVGEVLKGIRCYFDKALPMILLYKKERKQYHDTIVDDVS--PSTIYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQQLLDFLKFLQKNQTTFFL 301          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI001CC7B887 (protein MRG1-like isoform X2 n=7 Tax=Proteaceae TaxID=4328 RepID=UPI001CC7B887)

HSP 1 Score: 145 bits (366), Expect = 8.330e-38
Identity = 103/298 (34.56%), Postives = 167/298 (56.04%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKS----ENLGAPASTNNSVKKVKTEESAASSVKSESVC-----GGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVE--SRKLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            +  G+  +   G + Y+AKVLK+E +K     K  +Y++HYLGW+  WD+WV +  +     +N  K+K   K     ++L A  ST     ++K + SA + V  E +      G +  S SG + K   +   +        +KI++   LK+QL  +W+ ++Q      LV LPRSP V+DIL+++++  S+K  +   +  +  +GLR +FD+ALP+ LLYK ER+QYD+   D     PS VYGAEH LRLFV L + L  +++ ++   + LQ+K+   L+F+ K+Q +FFL
Sbjct:   31 FSEGEKVLAFHGPRLYEAKVLKVEFRK-----KEWRYYVHYLGWSKNWDEWVGVDRLRKFTEENVRKQKDLEKKLSADKSLKAGRST-----QIKPKGSADAKVDKEDLRNYVARGKKRKSDSGIEEKDIESMEKL--------VKIQIPSTLKKQLVDDWEFVTQL---GKLVKLPRSPCVDDILKKYLDYKSKKDGMVADSIGEILKGLRCYFDKALPVMLLYKKERQQYDEAIAD--NVSPSTVYGAEHLLRLFVKLPELLTYANIEEETLMR-LQQKLLEFLKFMQKNQSTFFL 304          
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Match: UPI000B8C92D4 (protein MRG1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C92D4)

HSP 1 Score: 147 bits (371), Expect = 9.230e-38
Identity = 104/293 (35.49%), Postives = 164/293 (55.97%), Query Frame = 1
Query:   13 YEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNSRWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESAASSVKSESVCGGEESSASGDDAKAKTNKPSV---RPSLDGSKL-KIRMGLALKEQLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESR--KLDITPSAFEDFAEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLFVVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFL 873
            +  G+  +   G + Y+AKV K E++K     K  +YF+HYLGWN  WD+WV    +     +N  K++   K   LG   S+       K+  SA +  KS +    ++     + AK K  K      + +L   KL KI++   LK+QL  +W+ ++Q   ++ LV LPRSP+++DIL +++E R  K  +   +  +  +G+R +FD+ALP+ LLYK ER+QY +  GD     PS VYGAEH LRLFV L + L   ++ ++   + LQ+K+  LL+FL K+Q +FF+
Sbjct:  116 FSEGERVLAYHGPRVYEAKVQKAELRK-----KEWKYFVHYLGWNKNWDEWVSADRLMKHNEENIMKQQALEKK--LGVDKSS-------KSARSAQAKAKSSTDAKVDKEDLKSNVAKGKKRKVESGIEKDNLSVEKLVKIQIPSTLKKQLVDDWEFVTQ---QDKLVKLPRSPSIDDILTKYLEYRTKKDGMVADSIGEILKGIRCYFDKALPVILLYKKERQQYQETVGDDVS--PSTVYGAEHLLRLFVKLPELLAYVNIEEETLTR-LQQKLLDLLKFLQKNQSTFFV 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00053F30A22.190e-4137.33protein MRG1 n=1 Tax=Beta vulgaris subsp. vulgaris... [more]
UPI000B78B1B03.670e-4035.27protein MRG1-like isoform X1 n=5 Tax=Chenopodium q... [more]
A0A803NFC0_CANSA4.790e-4034.47MRG domain-containing protein n=8 Tax=Cannabis sat... [more]
A0A2P5AFP4_PARAD1.330e-3935.17MRG n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AFP... [more]
A0A1Y1I2K4_KLENI3.430e-3935.54MRG domain-containing protein n=1 Tax=Klebsormidiu... [more]
A0A443NHP7_9MAGN4.040e-3935.05Protein MRG1 n=1 Tax=Cinnamomum micranthum f. kane... [more]
K7MM16_SOYBN1.040e-3834.47MRG domain-containing protein n=20 Tax=indigoferoi... [more]
A0A2P6RNS4_ROSCH2.880e-3835.49Putative chromatin remodeling & transcriptional ac... [more]
UPI001CC7B8878.330e-3834.56protein MRG1-like isoform X2 n=7 Tax=Proteaceae Ta... [more]
UPI000B8C92D49.230e-3835.49protein MRG1 n=1 Tax=Carica papaya TaxID=3649 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig118contigH-akashiwo_Contig118:654005..654892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog161934.XP_010679547.1
PFAMsMRG,Tudor-knot
Model size888
Max annot lvl35493|Streptophyta
KEGG koko:K11339
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006325,GO:0006338,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016573,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0031248,GO:0031974,GO:0031981,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:1901564,GO:1902493,GO:1902494,GO:1990234
Exons1
Evalue3.6e-42
EggNOG OGsKOG3001@1|root,KOG3001@2759|Eukaryota,37JI3@33090|Viridiplantae,3GF2G@35493|Streptophyta
DescriptionMortality factor 4-like protein
Cds size888
COG categoryBK
BRITEko00000,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387108.6447537-CDS-H-akashiwo_Contig118:654004..6548921681387108.6447537-CDS-H-akashiwo_Contig118:654004..654892Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig118 654005..654892 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig118.19.1prot_H-akashiwo_Contig118.19.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig118 654005..654892 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig118.19.1

>prot_H-akashiwo_Contig118.19.1 ID=prot_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=296bp
MQTDYEVGDTCVVKDGGKDYQAKVLKIEMKKGKNGKKIKQYFIHYLGWNS
RWDKWVELKEITPIELKNPSKKKKARKSENLGAPASTNNSVKKVKTEESA
ASSVKSESVCGGEESSASGDDAKAKTNKPSVRPSLDGSKLKIRMGLALKE
QLASEWQRLSQAETENTLVPLPRSPTVNDILQQFVESRKLDITPSAFEDF
AEGLREFFDEALPLRLLYKSERKQYDDMFGDPSGKKPSEVYGAEHFLRLF
VVLGDCLNTSDVTDKKEKKDLQEKITGLLQFLLKHQDSFFLDMDP*
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mRNA from alignment at H-akashiwo_Contig118:654005..654892-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig118.19.1 ID=mRNA_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig118:654005..654892- (Heterosigma akashiwo CCMP452)
ATGCAAACAGATTACGAGGTTGGAGATACATGTGTGGTTAAAGATGGAGG TAAAGATTACCAGGCCAAAGTATTGAAAATCGAAATGAAAAAGGGCAAGA ACGGCAAAAAGATCAAGCAATATTTCATTCACTATCTGGGGTGGAATTCG CGTTGGGACAAGTGGGTTGAACTCAAAGAAATAACACCCATCGAGCTGAA AAATCCCAGTAAGAAAAAGAAGGCAAGAAAGTCAGAAAACTTAGGAGCAC CTGCTTCTACGAATAACAGTGTCAAAAAGGTGAAAACAGAAGAATCTGCT GCTTCTTCCGTAAAATCTGAATCGGTTTGTGGTGGGGAAGAATCATCAGC ATCAGGCGATGACGCAAAGGCAAAGACTAACAAGCCTTCTGTAAGACCTT CCTTAGATGGTTCCAAACTTAAGATTCGAATGGGCCTTGCCCTGAAGGAG CAGCTAGCTTCTGAGTGGCAGCGTCTCTCACAAGCAGAAACAGAAAACAC CTTGGTACCACTGCCACGAAGTCCTACTGTAAATGATATTCTACAGCAGT TTGTGGAGTCTCGCAAGCTAGACATAACACCATCTGCATTTGAGGATTTT GCTGAAGGACTTCGAGAGTTTTTTGATGAGGCGCTCCCGCTAAGGCTTCT GTATAAGAGCGAAAGGAAGCAGTATGATGACATGTTTGGAGATCCCAGTG GCAAAAAGCCATCTGAAGTGTATGGCGCAGAGCATTTCCTGCGTCTGTTC GTTGTCCTAGGGGATTGCCTGAACACTTCTGATGTCACAGATAAGAAGGA GAAGAAGGATCTCCAGGAAAAGATCACTGGCCTGCTCCAATTCCTGTTGA AGCATCAGGACTCTTTCTTTTTGGATATGGACCCTTAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig118:654005..654892-

>mRNA_H-akashiwo_Contig118.19.1 ID=mRNA_H-akashiwo_Contig118.19.1|Name=mRNA_H-akashiwo_Contig118.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig118:654005..654892- (Heterosigma akashiwo CCMP452)
ATGCAAACAGATTACGAGGTTGGAGATACATGTGTGGTTAAAGATGGAGG
TAAAGATTACCAGGCCAAAGTATTGAAAATCGAAATGAAAAAGGGCAAGA
ACGGCAAAAAGATCAAGCAATATTTCATTCACTATCTGGGGTGGAATTCG
CGTTGGGACAAGTGGGTTGAACTCAAAGAAATAACACCCATCGAGCTGAA
AAATCCCAGTAAGAAAAAGAAGGCAAGAAAGTCAGAAAACTTAGGAGCAC
CTGCTTCTACGAATAACAGTGTCAAAAAGGTGAAAACAGAAGAATCTGCT
GCTTCTTCCGTAAAATCTGAATCGGTTTGTGGTGGGGAAGAATCATCAGC
ATCAGGCGATGACGCAAAGGCAAAGACTAACAAGCCTTCTGTAAGACCTT
CCTTAGATGGTTCCAAACTTAAGATTCGAATGGGCCTTGCCCTGAAGGAG
CAGCTAGCTTCTGAGTGGCAGCGTCTCTCACAAGCAGAAACAGAAAACAC
CTTGGTACCACTGCCACGAAGTCCTACTGTAAATGATATTCTACAGCAGT
TTGTGGAGTCTCGCAAGCTAGACATAACACCATCTGCATTTGAGGATTTT
GCTGAAGGACTTCGAGAGTTTTTTGATGAGGCGCTCCCGCTAAGGCTTCT
GTATAAGAGCGAAAGGAAGCAGTATGATGACATGTTTGGAGATCCCAGTG
GCAAAAAGCCATCTGAAGTGTATGGCGCAGAGCATTTCCTGCGTCTGTTC
GTTGTCCTAGGGGATTGCCTGAACACTTCTGATGTCACAGATAAGAAGGA
GAAGAAGGATCTCCAGGAAAAGATCACTGGCCTGCTCCAATTCCTGTTGA
AGCATCAGGACTCTTTCTTTTTGGATATGGACCCTTAG
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