mRNA_H-akashiwo_Contig1175.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A6V1TE77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TE77_HETAK) HSP 1 Score: 493 bits (1270), Expect = 2.180e-175 Identity = 250/251 (99.60%), Postives = 251/251 (100.00%), Query Frame = 1
Query: 1 ALFKSIMLAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFREYHDRFCNNKNSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWAFILYLWLGLLLVGAIISSMQNLYDV 753
ALFKSIMLAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKE+RNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFREYHDRFCNNKNSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWAFILYLWLGLLLVGAIISSMQNLYDV
Sbjct: 26 ALFKSIMLAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKELRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFREYHDRFCNNKNSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWAFILYLWLGLLLVGAIISSMQNLYDV 276
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A6S9DMW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DMW5_HETAK) HSP 1 Score: 297 bits (760), Expect = 2.330e-97 Identity = 150/248 (60.48%), Postives = 189/248 (76.21%), Query Frame = 1
Query: 10 KSIMLAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFREYHDRFCNNKNSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWAFILYLWLGLLLVGAIISSMQNLYDV 753
+SI+LAV LP VALVVG A MS EY +EK R+ R+ TL E+ NLT ++A N T GV+SKFE+FM EISPYL+GK+SVPD SDPFWNLEGS FFCWTIMTTIGYGDYAPKT+ GK+F +TI++VPLFV +LAHLS+ L +A FR+ HDRF + G+V+LGL F+LVL + FS SYLD YFSI++L+TVGLGD++PSLD+ +S+ FILY GLLL+G+I+S +QN+YDV
Sbjct: 30 RSILLAVCLPAVALVVGAALMSTFEYPSEKERLERFTTLFNEMANLTAEIEANFNNT-GVASKFEEFMDEISPYLSGKDSVPDASDPFWNLEGSAFFCWTIMTTIGYGDYAPKTDQGKIFVIIYTILTVPLFVASLAHLSTSLTEALGKCFRKNHDRFGKQGYYFAGGVVALGLLFILVLPISFSVG----SYLDTIYFSIVTLSTVGLGDFTPSLDDKSSFGFILYSLFGLLLIGSIVSGLQNMYDV 272
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A7S4DJ39_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ39_HETAK) HSP 1 Score: 189 bits (479), Expect = 2.480e-55 Identity = 97/248 (39.11%), Postives = 146/248 (58.87%), Query Frame = 1
Query: 58 GGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAV---FREYHDRFCN--------------NKNSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWAFILYLWLGLLLVGAIISSMQNLYD 750
GG E+ E RY + +++ L ++ L+ + V F+ ++ E+ PYL K+S+P + DPFW+LEGSVFFCWTIMTTIGYG YAP T GK+F F+ +++VPLF+ +L LS+ +A +V R+ D +C+ + Y+ GI++LGL + L+ ++ F+ WSYLD YF I+L+T+GLGDY P+L + FILY ++GLLLVG+I + MQ +
Sbjct: 4 GGVFFRHYEHPVELESFERYWEMHEKVTTLAQQIERDLDHPTVVED-FQAYIDEVMPYLTSKKSLPTLHDPFWDLEGSVFFCWTIMTTIGYGFYAPSTKTGKIFCIFYAVMTVPLFLSSLTTLSAAMANGIRSVASWLRKNEDHYCSIFFHRLGKKSDARKKRKWYIIGILALGLLYTLLFAIVFAREHDGWSYLDGVYFCFITLSTIGLGDYLPTLQEHEVFLFILYSFVGLLLVGSITNLMQEFFS 250
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A7S3XJH7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJH7_HETAK) HSP 1 Score: 121 bits (303), Expect = 2.010e-31 Identity = 59/114 (51.75%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 295 FFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFREYHDRFCNNKNSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGL 636
FFCWTIMTTIGYG Y+P T GK+F +TI+SVPLF+V+LAHLSS +AK + V + +K ++V GI +LG+F+LL +V F+ + W YLDA Y+++I+L TVGL
Sbjct: 1 FFCWTIMTTIGYGSYSPSTRAGKLFVTLYTIVSVPLFLVSLAHLSSSMAKLGQFVAGRFQTNGSESK-TFVFGIFALGVFYLLGSAVIFAEGHTGWDYLDAVYYAVITLFTVGL 113
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A061S2E9_9CHLO (Potassium channel subfamily K member 3 n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2E9_9CHLO) HSP 1 Score: 124 bits (311), Expect = 7.550e-30 Identity = 77/255 (30.20%), Postives = 130/255 (50.98%), Query Frame = 1
Query: 22 LAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFRE-----YHDRFCNNKNSYVPGIVSLGLF------FLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWA----FILYLWLGLLLVGAIISSMQN 741
L+V L ++ LV G LE E+A+ + L E+ N ++LN T ++ YL + + P+ W+ G+V+FC T++TTIGYG Y P+T GK F F+ ++ +P F+V L +S L + ++ R+ + +S V++ L F+L+ S F+A ++W YLDA YF+++++TT+G GD+SP N W +I Y GL+ +G +I+++QN
Sbjct: 44 LSVTLVILVLVWGALVFMHLEQPRERAQAAEFLALKAELEN------SLLNMTETEQEVLRRYLAFTERYLYTRATAPEDDRVSWSFMGAVYFCVTVVTTIGYGTYTPETEAGKGFLLFYALVGIPAFIVMLTIMSETLLSPINMLIKQTVVLLVKQRWLRSTSSVSVSSVAIVLLATFTTLFVLLWSCAFAA-YNEWPYLDAVYFALVTVTTIGFGDFSPD-TNALVWVEHCMYIFYFIFGLISMGTLIAAIQN 290
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A061QZ45_9CHLO (Potassium channel subfamily K member 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZ45_9CHLO) HSP 1 Score: 112 bits (280), Expect = 5.330e-26 Identity = 67/221 (30.32%), Postives = 113/221 (51.13%), Query Frame = 1
Query: 22 LAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFRE-----YHDRFCNNKNSYVPGIVSLGLF------FLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSP 651
L+V L ++ LV G LE E+A+ + L E+ N ++LN T ++ YL + + P+ W+ G+V+FC T++TTIGYG Y P+T GK F F+ ++ +P F+V L +S L + ++ R+ + +S V++ L F+L+ S F+A ++W YLDA YF+++++TT+G GD+SP
Sbjct: 44 LSVTLVILVLVWGALVFMHLEQPRERAQAAEFLALKAELEN------SLLNMTETEQEVLRRYLAFTERYLYTRATAPEDDRVSWSFMGAVYFCVTVVTTIGYGTYTPETEAGKGFLLFYALVGIPAFIVMLTIMSETLLSPINMLIKQTVVLLVKQRWLRSTSSVSVSSVAIVLLATFTTLFVLLWSCAFAA-YNEWPYLDAVYFALVTVTTIGFGDFSP 257
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A7S1SWK8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWK8_9CHLO) HSP 1 Score: 103 bits (257), Expect = 1.240e-22 Identity = 61/191 (31.94%), Postives = 97/191 (50.79%), Query Frame = 1
Query: 211 MTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFRE-----YHDRFCNNKNSYVPGIVSLGL------FFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPS---LDNTNSWAFILYLWLGLLLVGAIISSMQN 741
MT+I YL + + PD WN GS++FC+T++TTIGYG Y P T G++F F+ ++ +P FVV +S + V ++ + Y +SL FF+L + FS + WSYLD+ YF I+++TT+G GD P L ++ Y GL+ +G +I+++Q
Sbjct: 10 MTQI--YLTTRATAPDDDHSNWNFMGSLYFCFTVITTIGYGTYTPNTEAGRLFCIFYALVGIPSFVVMATIISESILNTVRLVMKDCILEGVERGWLKMTPRYSISTLSLCTLAVFVTFFVLSWAGAFSI-YNGWSYLDSVYFGIVTVTTIGFGDMVPEGSQLIAVEHLLYMCYFVFGLISMGTLITAVQK 197
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: E4XEU0_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XEU0_OIKDI) HSP 1 Score: 102 bits (254), Expect = 4.450e-22 Identity = 59/186 (31.72%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 220 ISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKAAEAVFREYHDRFCNNKNSYVPGIVS-----LGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNT--NSWAFILYLWL--GLLLVGAIISSMQNLYD 750
I+ YL K+ D WN + FF T+ TTIGYG+ +P TN GK+F FT+I +P F + L+ +++ + + +++ + + PG +S LG L+V+ DWS LDA Y+S+ISLTT+G GD P N + +++ W+ GL +G ++S + +L +
Sbjct: 9 INNYLALKKDCTD----HWNFHNAFFFAGTVATTIGYGNISPSTNHGKLFCITFTVIGIPYFAYMVGALAELISYKIDDIVKKFQSK---SMTKISPGAISSLYVILGCILLIVIPSYVFTLVEDWSMLDAIYYSVISLTTIGFGDLIPQNIKIVFNLYRVMVFFWILAGLTWLGGVVSMLTDLLN 187
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: H2MCD0_ORYLA (Potassium two pore domain channel subfamily K member 10 n=10 Tax=Oryzias TaxID=8089 RepID=H2MCD0_ORYLA) HSP 1 Score: 102 bits (255), Expect = 2.530e-21 Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 1
Query: 202 EDFMTEISPYLNGKESVPDVSDPFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALAHLSSMLAKA-------AEAVFREYHDRFCNNK---NSYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDY----SPSLDNTNSWAFILYLWL--GLLLVGAIISSMQN 741
E M +SP L ++ + S FW+L + FF T++TTIGYG+ AP T GGK+F F+ I +PLF LA + L E FR+ H + K S + I++ + F+ + +V F + DWS LDA YF +I+LTTVG+GDY + +D N + +++ W+ GL A++S + +
Sbjct: 157 EHAMDAVSPGLRPLDTTYNSS--FWDLSSAFFFAGTVITTIGYGNIAPSTQGGKIFCIFYAIFGIPLFGFLLAGIGDQLGTIFVKSILKVEKRFRQKHKQISQTKIRVTSAILFILAGCIVFVTIPAVIFKYIE-DWSTLDAIYFVVITLTTVGIGDYVAGGNRKIDYKNWYKPLVWFWILVGLAYFAAVLSMIGD 349
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Match: A0A665XFV0_ECHNA (Potassium channel, subfamily K, member 4a n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665XFV0_ECHNA) HSP 1 Score: 101 bits (251), Expect = 2.590e-21 Identity = 74/247 (29.96%), Postives = 126/247 (51.01%), Query Frame = 1
Query: 49 LVVGGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAILNGTSGVSSKFEDFMTEISPYLNGKESVPDVSD------PFWNLEGSVFFCWTIMTTIGYGDYAPKTNGGKVFTFFFTIISVPLFVVALA----HLSSMLAKAAEAVFREYHDRFCNNKN----SYVPGIVSLGLFFLLVLSVGFSASQSDWSYLDACYFSIISLTTVGLGDYSPSLDNTNSWAFILYLWL--GLLLVGAIISSMQN 741
LV+G LE+ E + Y+ LLK + + L+ S V+ +DF + ++ ++ DVS W+L + FFC TI+TTIG+G+ +P+T G++F + ++ +P+F + LA H+ ++L +A + + R S V I+ L FL V +V F + DWS+L++ YF +I+LTTVG GDY P + W +++LW+ GL +I++ + N
Sbjct: 17 LVMGALVFRTLEFPKESSA---YEDLLK-------TKQSFLDNNSCVTE--QDFHKLVKGVVSAVDAGLDVSGLPANFTSHWDLASAFFFCGTIITTIGFGNLSPRTGYGQLFCVCYALVGIPMFGILLAGVGDHMGTVLRRAVAKIETLFLKRKVRPTTVRVISAVLSILIGCLIFLAVPTVVFQKVE-DWSFLESLYFVVITLTTVGFGDYVPGTETQPFWCPLVWLWIVFGLAYFASILTMIGN 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1175.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1175.1.1 >prot_H-akashiwo_Contig1175.1.1 ID=prot_H-akashiwo_Contig1175.1.1|Name=mRNA_H-akashiwo_Contig1175.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=245bp MLAVFLPVVALVVGGASMSKLEYAAEKARVGRYDTLLKEIRNLTVSVDAIback to top mRNA from alignment at H-akashiwo_Contig1175:42092..42844- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1175.1.1 ID=mRNA_H-akashiwo_Contig1175.1.1|Name=mRNA_H-akashiwo_Contig1175.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=753bp|location=Sequence derived from alignment at H-akashiwo_Contig1175:42092..42844- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1175:42092..42844- >mRNA_H-akashiwo_Contig1175.1.1 ID=mRNA_H-akashiwo_Contig1175.1.1|Name=mRNA_H-akashiwo_Contig1175.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=735bp|location=Sequence derived from alignment at H-akashiwo_Contig1175:42092..42844- (Heterosigma akashiwo CCMP452)back to top |