mRNA_H-akashiwo_Contig1173.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI0010FBB0A7 (uncharacterized protein LOC114944459 n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FBB0A7) HSP 1 Score: 92.4 bits (228), Expect = 2.610e-21 Identity = 54/109 (49.54%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E F +FL LN H I++ E+ QLPFLDVLV KN+DG+ VYRKPTH+DRYLH TS++HP KN + I +L+YRA SL EL HL + NGY
Sbjct: 48 ETFPQFLDFLNYQHRSIQFIMEIEQNNQLPFLDVLVKKNDDGTLGHRVYRKPTHTDRYLHSTSHHHPAQKNSV--ISSLIYRALTISEPTSLN-EELEHLNQVLTKNGY 153
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI0005F5870B (uncharacterized protein LOC105568001 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F5870B) HSP 1 Score: 92.0 bits (227), Expect = 7.070e-21 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E FL +N HP I++ E+ Q+PFLDVLV +NEDG+ + VYRKPTH+DRYLH S++HP KN + I +LV+RA A+L EL HL + NGY
Sbjct: 12 ETLPHFLTFINSQHPNIQFTMETEQNSQIPFLDVLVRRNEDGTLSHNVYRKPTHTDRYLHANSHHHPAQKNSV--ISSLVHRALSISEPAALN-GELNHLHRTLTRNGY 117
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: A0A6J1QJD7_9HYME (uncharacterized protein LOC112461499 n=1 Tax=Temnothorax curvispinosus TaxID=300111 RepID=A0A6J1QJD7_9HYME) HSP 1 Score: 94.0 bits (232), Expect = 1.430e-20 Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 16 FLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
FL LN HP I++ E+ Q+PFLDVLV +N+DG+ + VYRKPTH+DRYLH TS++HP KN + I +LVYRA + SL EL HL + NGY
Sbjct: 53 FLAFLNSQHPNIQFTMEVEQNSQIPFLDVLVRRNDDGTLSHQVYRKPTHTDRYLHATSHHHPSQKNSV--ISSLVYRALTISESTSLN-GELEHLNQALTKNGY 153
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI0005F425C1 (uncharacterized protein LOC105566767 n=2 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F425C1) HSP 1 Score: 93.2 bits (230), Expect = 1.830e-20 Identity = 51/109 (46.79%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E +FL +N HP I++ E+ Q+PFLDVLV +NEDG+ + VYRKPTH+DRYLH S++HP KN + I +LV+RA A+L EL HL + NGY
Sbjct: 48 ETLPQFLTFINSQHPNIQFTMETEQNSQIPFLDVLVRRNEDGTLSHNVYRKPTHTDRYLHANSHHHPAQKNSI--ISSLVHRALSISEPAALN-GELNHLHRTLTRNGY 153
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: A0A401QI04_SCYTO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI04_SCYTO) HSP 1 Score: 94.7 bits (234), Expect = 2.390e-20 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1
Query: 10 DKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPVKNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGYLEEFVK 342
++FL LN IHP IK+ E+ GQ+PFLDVLV +N +G+ + TVYRK TH+DRYLH S++HP K K + TL +R+ L+ EL HL++ A NGY + ++
Sbjct: 327 EEFLGHLNSIHPNIKFTMEIEENGQIPFLDVLVKRNAEGTLSHTVYRKTTHTDRYLHAESHHHP-KQKRGILHTLAHRSKTISDKQHLR-EELQHLQQALASNGYTKTEIQ 435
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI0005F52B34 (uncharacterized protein LOC105562568 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F52B34) HSP 1 Score: 90.9 bits (224), Expect = 2.730e-20 Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E +FL +N HP I++ E+ Q+PFLDVLV +NEDG+ VYRKPTH+DRYLH S++HP KN + I +LV+RA A+L +L HL + NGY
Sbjct: 48 ETLPQFLTFINSQHPNIQFTIEIEQNSQIPFLDVLVCRNEDGTLGHNVYRKPTHTDRYLHANSHHHPAQKNSV--INSLVHRALSISEPAALD-GKLNHLHRALTRNGY 153
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI0005F54FC3 (uncharacterized protein LOC105562922 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F54FC3) HSP 1 Score: 92.4 bits (228), Expect = 2.930e-20 Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E +FL +N HP I++ E+ Q+PFLDVL+ +NEDG+ + VYRKPTH+DRYLH S++HP KN + I +LV+RA A+L EL HL + NGY
Sbjct: 35 ETLPQFLTFINSQHPNIQFTMETEQNSQIPFLDVLIRRNEDGTLSHNVYRKPTHTDRYLHANSHHHPAQKNSV--ISSLVHRALSISEPAALN-GELNHLHRTLTRNGY 140
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI00193D6260 (uncharacterized protein LOC105202200 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193D6260) HSP 1 Score: 91.3 bits (225), Expect = 1.210e-19 Identity = 51/108 (47.22%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPVKNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E F FL LN HP IK+ E+ Q+PFLDVLV +N DG+ VYRKP H+D+YLH TS++HP + L I +LVYRA S + EL HL + NGY
Sbjct: 193 ETFSPFLAFLNAQHPNIKFTMEVEQENQIPFLDVLVRRNGDGTLDHRVYRKPIHTDQYLHATSHHHPSQKNLV-INSLVYRALTV-SVPTFLNKELQHLNQTLTRNGY 298
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: UPI0005F49CD5 (uncharacterized protein LOC105556100 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F49CD5) HSP 1 Score: 92.0 bits (227), Expect = 2.240e-19 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPV-KNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGY 324
E FL +N HP I++ E+ Q+PFLDVLV +NEDG+ + VYRKPTH+DRYLH S++HP KN + I +LV+RA A+L EL HL + NGY
Sbjct: 349 ETLPHFLTFINSQHPNIQFTMETEQNSQIPFLDVLVRRNEDGTLSHNVYRKPTHTDRYLHANSHHHPAQKNSV--ISSLVHRALSISEPAALN-GELNHLHRTLTRNGY 454
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Match: A0A654GVG9_9CEST (Reverse transcriptase domain-containing protein n=3 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A654GVG9_9CEST) HSP 1 Score: 91.3 bits (225), Expect = 2.490e-19 Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 16 FLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRKPTHSDRYLHWTSNNHPVKNKLPGIRTLVYRATHYCSTASLKMAELAHLRKNFADNGYLEEFVK 342
F + LN I P I++ EK QLPFLDVLV + EDG TTVYRK T++ R L + SN HP+ +K +RTL R +C+ + K AE LRK FA NGY FV+
Sbjct: 117 FTQHLNSIFPDIQFTMEEEKDCQLPFLDVLVQRKEDGGLKTTVYRKATNTSRILSFLSN-HPLSHKRSCVRTLYRRVETHCTEPADKKAEAQFLRKLFAMNGYPGNFVE 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1173.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1173.9.1 >prot_H-akashiwo_Contig1173.9.1 ID=prot_H-akashiwo_Contig1173.9.1|Name=mRNA_H-akashiwo_Contig1173.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=114bp ELFDKFLKKLNGIHPKIKWEAVFEKFGQLPFLDVLVVKNEDGSFTTTVYRback to top mRNA from alignment at H-akashiwo_Contig1173:251539..251880- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1173.9.1 ID=mRNA_H-akashiwo_Contig1173.9.1|Name=mRNA_H-akashiwo_Contig1173.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig1173:251539..251880- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1173:251539..251880- >mRNA_H-akashiwo_Contig1173.9.1 ID=mRNA_H-akashiwo_Contig1173.9.1|Name=mRNA_H-akashiwo_Contig1173.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig1173:251539..251880- (Heterosigma akashiwo CCMP452)back to top |