mRNA_H-akashiwo_Contig1172.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A7S4DEE9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEE9_HETAK) HSP 1 Score: 255 bits (652), Expect = 1.240e-79 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRA 381
MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYR
Sbjct: 346 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRG 472
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A7S3Y8R3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8R3_HETAK) HSP 1 Score: 255 bits (652), Expect = 2.590e-78 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRA 381
MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYR
Sbjct: 346 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRG 472
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A7S3Y2Y7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2Y7_HETAK) HSP 1 Score: 228 bits (580), Expect = 2.500e-74 Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRA 381
MSNEV+EWSD+SALL RRG+MLDKKPGLRPIG+GEVLQRILAK VAWVTKGDVT+ G DNLAGGLKSGIEGGVHAM+ELWAD EV+VLVDASNAFNSLDRQAALWNCRILWSRAS FLFNTYR
Sbjct: 19 MSNEVMEWSDISALLARRGLMLDKKPGLRPIGVGEVLQRILAKLVAWVTKGDVTQESGADNLAGGLKSGIEGGVHAMKELWADGGPEVIVLVDASNAFNSLDRQAALWNCRILWSRASLFLFNTYRG 145
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A6H5GA13_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GA13_9HEMI) HSP 1 Score: 161 bits (408), Expect = 3.730e-45 Identity = 74/129 (57.36%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
M+N ++W+ + ALL RR + LDK PG+RPIG+ EVLQRI AKA+AW T D+ E CG+D L+ GLKSGIEG +HAM ++ +D TE ++LVDA NAFN L R ALWN RI W R + FLFN+YR P
Sbjct: 159 MANNNVDWNRIKALLARRAVALDKCPGVRPIGVSEVLQRICAKAMAWTTGDDLKEACGSDQLSAGLKSGIEGAIHAMSAIFEEDQTECILLVDARNAFNQLSRPLALWNARIFWPRCARFLFNSYRGYP 287
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A0A9XG89_LYGHE (Mediator of RNA polymerase II transcription subunit 13 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XG89_LYGHE) HSP 1 Score: 157 bits (396), Expect = 3.870e-45 Identity = 73/129 (56.59%), Postives = 98/129 (75.97%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
++N V+EWS + ALL RRG+ LDK PG+RPIG+GE+LQRI AK +A +T D+ EVCG+D L+ G+KSGIEG VHA+ ++ + + E ++LVDA+NAFN++ R ALWN RI W R + FLFNTYR P
Sbjct: 81 LANGVIEWSRIKALLARRGVALDKCPGVRPIGVGELLQRICAKTMALITGEDLKEVCGSDQLSAGIKSGIEGAVHAISNMFNEAEHEGLLLVDATNAFNTMSRPLALWNSRIYWPRCARFLFNTYRGYP 209
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A6H5HCT1_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HCT1_9HEMI) HSP 1 Score: 166 bits (420), Expect = 4.630e-45 Identity = 74/129 (57.36%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
M+N +++W+ + A+L RRG+ LDK PG+RPIG+GE+LQRILAK +A +T D+ E CG+D LA G KSGIEG +HAM E++A++D E ++LVDA+NAFN++ R A+WN RILW R + FLFNTYR P
Sbjct: 371 MANGIVDWNQIRAILARRGVALDKCPGVRPIGVGEMLQRILAKTMALLTAEDLKEACGSDQLAAGTKSGIEGAIHAMEEIFAEEDQECLLLVDAANAFNTMSRPLAIWNARILWPRCAKFLFNTYRGFP 499
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A0A9XM84_LYGHE (Uncharacterized protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XM84_LYGHE) HSP 1 Score: 162 bits (410), Expect = 4.780e-44 Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
++N V+EWS + ALL RR + LDK+PG+RPIG+GEVLQRI AK +A VT GD+ E C + L G KSG+EG VH M L+ D + E ++L+DASNAFNSL R ALWN RILW R S FLFNTYR P
Sbjct: 352 LANGVVEWSTIRALLARRAVALDKQPGIRPIGVGEVLQRICAKTMAMVTGGDLQEECAAEQLCAGTKSGVEGAVHGMTRLFEDPNCESILLMDASNAFNSLSRPLALWNARILWPRCSTFLFNTYRGFP 480
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A146L7G5_LYGHE (Uncharacterized protein n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L7G5_LYGHE) HSP 1 Score: 162 bits (410), Expect = 1.030e-43 Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
++N V+EWS + ALL RR + LDK+PG+RPIG+GEVLQRI AK +A VT GD+ E C + L G KSG+EG VH M L+ D + E ++L+DASNAFNSL R ALWN RILW R S FLFNTYR P
Sbjct: 352 LANGVVEWSTIRALLARRAVALDKQPGIRPIGVGEVLQRICAKTMAMVTGGDLQEECAAEQLCAGTKSGVEGAVHGMTRLFEDPNCESILLMDASNAFNSLSRPLALWNARILWPRCSTFLFNTYRGFP 480
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A6H5FVY7_9HEMI (Reverse transcriptase domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FVY7_9HEMI) HSP 1 Score: 159 bits (401), Expect = 1.610e-42 Identity = 70/129 (54.26%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
++N ++EW + ALL RRG+ +DKKPG+RPIG+GEVLQR+ +K +A +T D+ E CG+D L G KSGIEG +HA +L+ D++ E ++L+DA+NAFN++ R A+WN RILW R S FLFNTYR P
Sbjct: 259 LANSIVEWDKIKALLARRGVAIDKKPGIRPIGVGEVLQRLCSKTMAIITGIDLKEECGSDQLCAGAKSGIEGAIHASSKLFEDEEVEGMLLIDATNAFNTISRPLAIWNSRILWPRCSRFLFNTYRGHP 387
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Match: A0A146L2U3_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L2U3_LYGHE) HSP 1 Score: 156 bits (395), Expect = 8.900e-42 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 1 MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRATP 387
MSN ++EW + ALL RRG+ LDK PG+RPIG+GEVLQRI AK + +VT D+ E CG D L G K+G+E +H M +AD +TE ++L+DA+NAFNSL R LWN R+LW R + FLFNTYR P
Sbjct: 313 MSNGIMEWDKIKALLARRGVALDKNPGVRPIGVGEVLQRICAKTMVFVTGIDLKEECGADQLCAGTKAGVESAIHGMSMRFADTETEGMLLIDATNAFNSLSRPLTLWNARMLWPRCARFLFNTYRGFP 441 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1172.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1172.9.1 >prot_H-akashiwo_Contig1172.9.1 ID=prot_H-akashiwo_Contig1172.9.1|Name=mRNA_H-akashiwo_Contig1172.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=133bp MSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKback to top mRNA from alignment at H-akashiwo_Contig1172:309256..309654- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1172.9.1 ID=mRNA_H-akashiwo_Contig1172.9.1|Name=mRNA_H-akashiwo_Contig1172.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=399bp|location=Sequence derived from alignment at H-akashiwo_Contig1172:309256..309654- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1172:309256..309654- >mRNA_H-akashiwo_Contig1172.9.1 ID=mRNA_H-akashiwo_Contig1172.9.1|Name=mRNA_H-akashiwo_Contig1172.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=399bp|location=Sequence derived from alignment at H-akashiwo_Contig1172:309256..309654- (Heterosigma akashiwo CCMP452)back to top |