mRNA_H-akashiwo_Contig1166.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 247 bits (630), Expect = 9.890e-76 Identity = 126/171 (73.68%), Postives = 144/171 (84.21%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEHIPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
LD +KSVGPD VSP VLK CA +L PL RLFQK+ +AA+FP SWKVARVTPVYKK DA+ PKNYRP+SVLPTLATTFERVLMPQL+SFL EHIP QFGFL TGT+DVGVI+ADQI R+LE RKDVRLVALDF+GAF KV R +L HL AVGVR +A++LF+SYL G+
Sbjct: 323 LDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQ 493
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 246 bits (627), Expect = 6.940e-74 Identity = 126/171 (73.68%), Postives = 143/171 (83.63%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEHIPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
LD +KSVGPD VSP VLK CA +L PL RLFQK+ +AA+FP SWKVARVTPV+KK DA PKNYRP+SVLPTLATTFERVLMPQL+SFL EHIP QFGFL TGT+DVGVI+ADQI R+LE RKDVRLVALDF+GAF KV R +L HL AVGVR +A++LF+SYLS R
Sbjct: 323 LDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEHIPSNQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDR 493
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL) HSP 1 Score: 128 bits (322), Expect = 3.580e-31 Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
+D K+ GPD+VSP +LKHCA+EL PL +F R +P WK ARV PV+KK + P NYRP+S+L + E+++ + L E+ + QFGF G T D+ +II+ +LE D +VALD GAF +V +++ L A G++G L + YL GR
Sbjct: 377 VDVGKATGPDDVSPRLLKHCARELSAPLTTVFTSCLREKKWPSVWKEARVVPVHKKNSRSEPNNYRPISLLSVMGKLLEKIVAAAIYQHLSENHLLSDRQFGFRPGRSTADLLLIISKDWQDALEEGLDTLVVALDIAGAFDRVWHAGLVKKLCAKGIQGNLLALLEDYLQGR 549
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: UPI001E1D5DCD (uncharacterized protein LOC123531125 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5DCD) HSP 1 Score: 125 bits (313), Expect = 5.270e-30 Identity = 69/173 (39.88%), Postives = 99/173 (57.23%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
+D SK+ GPD VSP L+ A L PLA F + R+++FP WK+A VTP++KK D + P NYRP+S+L + ER + + + L H + P Q GF++G T++ + + I R+L+ K+VR V D AF +V R VL L +GVRG + SYLS R
Sbjct: 491 MDPSKASGPDLVSPRHLREGAPALAQPLATFFNTLLRSSNFPSQWKLANVTPIFKKSDPSLPSNYRPISLLSCIGKLMERCVHKHIYNHLIMHNLLTPNQSGFVKGDSTINQLSYLYNDICRALDEGKEVRAVFCDISKAFDRVWHRGVLYKLSRLGVRGSLLQWLSSYLSSR 663
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A0P4VTV9_SCYOL (Reverse transcriptase domain-containing protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VTV9_SCYOL) HSP 1 Score: 119 bits (298), Expect = 5.360e-28 Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
LD K+ GPD +SP VLK CA+EL PL +F +P WK ARV PV+K+ ++PKNYRP+S+L + FERV+ + L ++ + +QFGF G T D+ +++ +L+ D +VALD GAF +V +LE L A G++G +L YL GR
Sbjct: 223 LDVQKATGPDNISPHVLKQCARELAVPLTTVFSACLWENTWPLVWKEARVVPVHKRSSRSDPKNYRPISLLSVVGKVFERVVADVVCRHLQDNYLLSDQQFGFRPGRSTSDLLMLLTGGWQDALDGGLDSVVVALDIAGAFDRVWHGGLLEKLRAKGIQGDLLQLLGDYLQGR 395
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: UPI001E1D1C75 (uncharacterized protein LOC123507079 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D1C75) HSP 1 Score: 119 bits (297), Expect = 7.970e-28 Identity = 63/173 (36.42%), Postives = 98/173 (56.65%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
LDE+K+VGP ++SP VL+ CA EL PL LF + +P+ WK + V P++KK KNYRPVS+LP L+ E ++ +++ L H + QFGF +G D+ ++++ + +L+ K +VALD + AF +V ++ L AV V G L ++YL R
Sbjct: 756 LDENKAVGPQDISPHVLRQCAAELARPLTSLFNHCLATSTWPEMWKGSSVVPLHKKNSKAEAKNYRPVSLLPVLSKVLETIVASRVTQHLERHHLLSNRQFGFRQGRSVADLHLLLSTKWSEALDRGKATAVVALDIEAAFDRVWHAALITKLRAVKVDGALLHLLENYLRAR 928
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A2B4RRK4_STYPI (Putative RNA-directed DNA polymerase from transposon X-element n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RRK4_STYPI) HSP 1 Score: 117 bits (293), Expect = 2.030e-27 Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 4 DESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
D+SK+ G D++S +++ CA + P+ +F + FPD WK AR+TP+YK+GD + NYRP+SV+P +A FER++ QL ++L EH + Q GF TV + D +++ K ++ LD K AF V + +L L G+ G++F+ F+SYL R
Sbjct: 110 DKSKATGLDKISARLIRECADLICVPICDIFNQSISQGTFPDDWKYARITPLYKQGDRGDANNYRPISVIPIMAKVFERIVYEQLYAYLEEHDILCQNQSGFRANHSTVTALLEATDSWAYNIDNEKINGVIFLDLKKAFDTVDHQILLSKLNYYGIHGKSFRWFQSYLENR 281
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: Q0MWX5_9NEOP (Reverse transcriptase (Fragment) n=1 Tax=Phengaris teleius TaxID=203778 RepID=Q0MWX5_9NEOP) HSP 1 Score: 110 bits (274), Expect = 3.240e-27 Identity = 56/164 (34.15%), Postives = 89/164 (54.27%), Query Frame = 1
Query: 22 GPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEHIPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
GPD + P ++ C L PL+ +F K FPD WK+A++TP+YK GD + NYRP+S+L LA FE ++ L + + + P+Q GF+ G T+ ++ ++ + +S + V + LDF AF +V +L L +G+ G + F SYL R
Sbjct: 1 GPDGIPPFFVRMCGSALSTPLSIIFNKSLSQGTFPDLWKIAKITPIYKCGDKNDVTNYRPISILNCLAKIFEGMIYDSLYNHILHCLSPKQHGFISGKSTLSNLLVYSNFLCQSFNKKSQVDSIYLDFSKAFDRVNHNVLLIKLQHLGIHGDLHRWFHSYLINR 164
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A0V0J566_SCHSO (Putative RNA-directed DNA polymerase from transposon X-element (Fragment) n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0V0J566_SCHSO) HSP 1 Score: 116 bits (290), Expect = 6.250e-27 Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
L+ESKS GPD++ P +LK A EL PL+ +FQ A P WK AR+TP+YK G + NYRP+S+ E+++ +L FL +H + EQ GF G V + + R+++ + +V +DFK AF V + +L L G+RG + KS+L GR
Sbjct: 315 LNESKSPGPDDIPPKLLKELAAELAKPLSMIFQTSFEAGTLPADWKSARITPLYKGGSKVSANNYRPISLTSICCKLMEKIIKRELMRFLEQHKLLSDEQHGFRSGRSCVTNLLYCLEHWTRAVDEGSALHVVYIDFKKAFDSVPHQRLLHKLNRTGIRGNLLRWIKSFLFGR 487
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Match: A0A0V0J9S5_SCHSO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0V0J9S5_SCHSO) HSP 1 Score: 111 bits (278), Expect = 7.710e-27 Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 1
Query: 1 LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVTPVYKKGDATNPKNYRPVSVLPTLATTFERVLMPQLSSFLYEH--IPPEQFGFLRGTGTVDVGVIIADQIVRSLEVRKDVRLVALDFKGAFGKVLRREVLEHLGAVGVRGRAFKLFKSYLSGR 513
L++SKS GPD++ P +LK A EL PL+ +FQ A P WK AR+TP+YK G + NY P+S+ E+++ +L FL +H + EQ GF G V + + R+++ + +V +DFK AF V + +L L G+RG + KS+L GR
Sbjct: 34 LNKSKSPGPDDIPPKLLKELAAELAKPLSMIFQTSFEAGTLPADWKSARITPLYKGGSKVSANNYWPISLTSICCKLMEKIIKRELMRFLEQHKLLSDEQHGFRSGRSCVTNLLYCLEHWTRAVDEGSALHVVYIDFKKAFDSVPHQRLLHKLNRTGIRGNLLRWIKSFLFGR 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1166.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1166.5.1 >prot_H-akashiwo_Contig1166.5.1 ID=prot_H-akashiwo_Contig1166.5.1|Name=mRNA_H-akashiwo_Contig1166.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=175bp LDESKSVGPDEVSPCVLKHCAKELDGPLARLFQKVERAADFPDSWKVARVback to top mRNA from alignment at H-akashiwo_Contig1166:187367..187891- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1166.5.1 ID=mRNA_H-akashiwo_Contig1166.5.1|Name=mRNA_H-akashiwo_Contig1166.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=525bp|location=Sequence derived from alignment at H-akashiwo_Contig1166:187367..187891- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1166:187367..187891- >mRNA_H-akashiwo_Contig1166.5.1 ID=mRNA_H-akashiwo_Contig1166.5.1|Name=mRNA_H-akashiwo_Contig1166.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=525bp|location=Sequence derived from alignment at H-akashiwo_Contig1166:187367..187891- (Heterosigma akashiwo CCMP452)back to top |