mRNA_H-akashiwo_Contig1163.8.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 389 bits (1000), Expect = 5.900e-135 Identity = 194/252 (76.98%), Postives = 219/252 (86.90%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIK----------YLQQTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYL 726
SLRLLLAISANKGYAVDSLDISTAFLNG + DVYVR+P + DPQHPNKVWKLNKALYGLKQSP +WY+ELH+HL S GF+RSG+ESCLY+ RD G ELMV VYVDDLVISGS+ A+VS+FK+SLAS+Y+LTD GEL+QILGIK +L QTSFIKDA++KFGLDYLPAC+TP+DH DLTPTPGFKA+LS+AN YRSMVGTLA VANWTRPELAFTVHKLQR+Q NPEPKHFEA +RAFRYL
Sbjct: 18 SLRLLLAISANKGYAVDSLDISTAFLNGAMTDDVYVRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYIHRDG-GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 280 bits (717), Expect = 1.010e-90 Identity = 141/188 (75.00%), Postives = 161/188 (85.64%), Query Frame = 1
Query: 208 LELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIK----------YLQQTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGTQS 741
+ELH+HL S GF+RSG+ESCLY+ RD G ELMV VYVDDLVISGS+ A+VS+FK+SLAS+Y LTD GEL+QILGIK +L QTSFIKDA++KFGLDYLPAC+TP+DH DLTPTPGFKA+LS+AN YRSMVGTLA VANWTRPELAFTVHKLQR+Q NPEPKHFEA +RAFRYLKGTQS
Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDG-GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQS 187
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 263 bits (673), Expect = 2.350e-83 Identity = 132/204 (64.71%), Postives = 156/204 (76.47%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGE-LMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIK----------YLQQTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEAN 579
SLRL+L+I+ANKG+AV++LDISTAFLN D+DGDVYV++P GF D HP+KVWKL KALYGL+QSP LWY LHE LL Q F RS YESCLY ++S GE MV VYVDDLV+S + P++VS K S SR+ +TDLG L+ ILGIK YL Q SF++DAISKFGLDYLPACRTPM + DLTPTPGFKA L +AN
Sbjct: 206 SLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK) HSP 1 Score: 194 bits (494), Expect = 2.640e-56 Identity = 96/147 (65.31%), Postives = 116/147 (78.91%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGE-LMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIK 438
SLRL+L+I+ANKG+AV++LDISTAFLN D+DGDVYV++P GF D HP+KVWKL KALYGL+QSP LWY LHE LL Q F RS YESCLY ++S GE MV VYVDDLV+S + P++VS K S SR+ +TDLG L+ ILGIK
Sbjct: 277 SLRLMLSIAANKGHAVEALDISTAFLNSDIDGDVYVKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIK 423
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 182 bits (463), Expect = 4.530e-49 Identity = 97/258 (37.60%), Postives = 158/258 (61.24%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIKY----------LQQTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLS--EANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGTQ 738
SLR +L I+A++ + +DI TAFL+G ++ D+Y+++P G++ P +KV KL K+LYGLKQ+P WY L+ LL QG+ R+GY+SC+Y S+GG+ +++VYVDD+V++ S + +S K++++ Y+++D+GE+ ILGIK L Q SFI++A KF + P++ D+ LS EA ++RS+VGT+ +A WT PE+A+++H L + +P A+ RYL T+
Sbjct: 576 SLRTVLTIAASEDMEIHCMDIKTAFLHGKLEEDIYMKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTE 833
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A540M9F0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540M9F0_MALBA) HSP 1 Score: 176 bits (447), Expect = 1.450e-48 Identity = 97/255 (38.04%), Postives = 149/255 (58.43%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIKYLQ--------QTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGTQS 741
++R L+A++A KG+ + LD+ +AFLNG ++ +VY+ +P GF+ +KV+KL KALYGLKQ+P WY E+ +L S F RS E+ LY D GG L+V++YVDD+V +GS+ ++S+FK + +Y+++DLG L LG+ LQ Q+ + K + KFGL+ P+ L G ++ ++ YR +VG+L + TRP+L + L R P KHF A R RY++GT S
Sbjct: 95 TIRTLIALAAQKGWKLFQLDVKSAFLNGILEEEVYIEQPEGFEVKNACHKVYKLRKALYGLKQAPRAWYSEIDAYLTSCNFIRSTSEATLYTKSDEEGGILIVSIYVDDIVYTGSSKTLLSEFKMEMMQKYEMSDLGLLHHFLGMGILQTENGVFIHQSKYAKSLLVKFGLEDCKPVSIPLPTGEKLKKVDG--SEFADETMYRKIVGSLLYLTA-TRPDLMYAASLLSRFMNGPTKKHFGIARRVLRYVQGTLS 346
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A151SM08_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SM08_CAJCA) HSP 1 Score: 180 bits (457), Expect = 3.220e-48 Identity = 98/253 (38.74%), Postives = 149/253 (58.89%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIK--------YLQQTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGT 735
SLR LLAI+A+K + +D +D+ AFLNGD+D +VY++ P G+ P P+KV +L KALYGLKQ+P W+ + H+ + GF S Y++ L++ R+ G +++ +YVDD++I+G +S+ K+ L +++ DLG LS LGI+ +L Q + D IS+ GL TP++ A TP G L + YR +VG+L TRP++A+ VH + + C P HF A R RY+KGT
Sbjct: 755 SLRTLLAIAASKKWFIDQMDVKNAFLNGDLDAEVYMQPPPGYSCP--PHKVCRLRKALYGLKQAPRSWFAKFHDTIAQLGFTSSTYDNALFIRRNDHGTVILL-LYVDDMIITGDDSNGISELKQFLNLHFEMKDLGSLSYFLGIQILSCDDGLFLSQAKYASDLISRAGLTDCKTESTPLETRAHFTPLDG--TPLEDPTLYRQLVGSLI-YLTVTRPDIAYAVHLVSQFMCAPRSTHFAAVLRIIRYIKGT 1001
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A5H2XKG5_PRUDU (BURP domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XKG5_PRUDU) HSP 1 Score: 175 bits (444), Expect = 3.960e-48 Identity = 96/253 (37.94%), Postives = 147/253 (58.10%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIKYLQ--------QTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGT 735
++R L+A++A KG+ + LD+ +AFLNG + +VYV +P GF + +KV+KL KALYGLKQ+P WY E++ +L+S G+ RS E+ LY G L+V++YVDD+V +GS+ ++ +FK + RY++TDLG L LG+ +Q Q + + KFGL TP+ L G +D ++ N YR +VG+L + TRP++ F L R P KH+ A+R RY++GT
Sbjct: 95 TIRTLIALAAQKGWKLYQLDVKSAFLNGVLKEEVYVDQPDGFVTTNYEDKVYKLKKALYGLKQAPRAWYEEINAYLVSCGYVRSTSEATLYCKTKEDSGTLIVSIYVDDIVYTGSSEELIDEFKTEMMRRYEMTDLGLLYHFLGMAVIQTESCIFINQKKYALTLLDKFGLKQCKPVSTPLVATEKLCKDDG--SDPADENEYRQIVGSLLYLTA-TRPDIMFAASLLARFMHCPTKKHYGTAKRVLRYIQGT 344
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: A0A438HRV0_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HRV0_VITVI) HSP 1 Score: 175 bits (444), Expect = 4.850e-48 Identity = 92/253 (36.36%), Postives = 153/253 (60.47%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIK--------YLQQTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGT 735
++RLLLA++ G+ V LD+ +AFLNG + ++YV++P GF+ H +KV+KL+KALYGLKQ+P WY + HL+ GF+RS E+ LY+ ++ G +L+V++YVDD++++GS +++DFK + ++++DLG ++ LG++ ++ Q + D + KF L+ TP+ ++ G K L E + YRS+VG+L T+P+L F L R +P H A+R +Y+KGT
Sbjct: 110 TIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYSRIDSHLIQLGFRRSENEATLYLKQNDDGLQLVVSLYVDDMLVTGSNVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEK--LEEPSAYRSLVGSLL-YLTVTKPDLMFPASLLSRFMSSPSNVHMGVAKRVLKYVKGT 359
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Match: W9QMZ8_9ROSA (ABC-type xenobiotic transporter n=1 Tax=Morus notabilis TaxID=981085 RepID=W9QMZ8_9ROSA) HSP 1 Score: 179 bits (455), Expect = 6.610e-48 Identity = 99/253 (39.13%), Postives = 154/253 (60.87%), Query Frame = 1
Query: 1 SLRLLLAISANKGYAVDSLDISTAFLNGDVDGDVYVRRPSGFKDPQHPNKVWKLNKALYGLKQSPHLWYLELHEHLLSQGFQRSGYESCLYVCRDSSGGELMVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIKYLQ--------QTSFIKDAISKFGLDYLPACRTPMDHIADLTPTPGFKADLSEANRYRSMVGTLA*VANWTRPELAFTVHKLQRSQCNPEPKHFEAAERAFRYLKGT 735
++RLL+A+ A KG+ + LD+ +AFLNG + +++V +P F + +KV++L KALYGLKQ+P WY + +HLL GF+RS E+ LYV + + L++++YVDDL+I+GS +V FK+ + + +++TDLGE+S LG+K LQ Q + KD + KFG++ TP+ L+ G +D +A YRS++G L + TRP++ F L R P HF+AA+R RY+KGT
Sbjct: 1016 TIRLLIALVAQKGWKIFQLDVKSAFLNGYLKEEIFVEQPPCFLKKGNEDKVYQLKKALYGLKQAPRAWYSRIDDHLLQLGFKRSPSEATLYV-QQAGDDLLIISLYVDDLLITGSNITLVQKFKKEMQNVFEMTDLGEMSYFLGMKILQTEQGIFISQEKYAKDVLKKFGMENCKDVSTPLGLNEKLSKEDG--SDKIDAGIYRSLIGCLLYLTA-TRPDIMFATSLLSRFMQAPSEIHFKAAKRVLRYVKGT 1264 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1163.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1163.8.1 >prot_H-akashiwo_Contig1163.8.1 ID=prot_H-akashiwo_Contig1163.8.1|Name=mRNA_H-akashiwo_Contig1163.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=103bp MVTVYVDDLVISGSTPAMVSDFKRSLASRYDLTDLGELSQILGIKYLQQTback to top mRNA from alignment at H-akashiwo_Contig1163:214611..215387- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1163.8.1 ID=mRNA_H-akashiwo_Contig1163.8.1|Name=mRNA_H-akashiwo_Contig1163.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=777bp|location=Sequence derived from alignment at H-akashiwo_Contig1163:214611..215387- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1163:214611..215387- >mRNA_H-akashiwo_Contig1163.8.1 ID=mRNA_H-akashiwo_Contig1163.8.1|Name=mRNA_H-akashiwo_Contig1163.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=309bp|location=Sequence derived from alignment at H-akashiwo_Contig1163:214611..215387- (Heterosigma akashiwo CCMP452)back to top |