mRNA_H-akashiwo_Contig1155.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1155.5.1 vs. uniprot
Match: A0A7S3UWV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWV5_HETAK) HSP 1 Score: 719 bits (1857), Expect = 2.970e-260 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = -1
Query: 1 AVAAATNTAIKIAPAAKAKVPNACHKNNKDTSTCVPTAYFIGASKCATTSFALAFKEHPFMRGVAWGHESEALSHGAPCPSSHMVNSVKAHMSCTSDGANVGGLEVKLSNSKRLYANGTSNDKGTLPLTYFYKPDALFYPHAARNLALAESKYPKVGYPYPPKTSRFLVMLREPIGRTFSSWSFKVESGGGKETRPWVESVRHGLGVLASTLNCLDRETKKGSSVGLALENMCAATHFDPRSSYFHHVMKSVYSLQFEVWFKRFSKSQFHILFMEDFIRDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHTLDAPTKGTREALDLAFAPFNCRLAQQL 1068
AVAAATNTAIKIAPAAKAKVPNACHKNNKDTSTCVPTAYFIGASKCATTSFALAFKEHPFMRGVAWGHESEALSHGAPCPSSHMVNSVKAHMSCTSDGANVGGLEVKLSNSKRLYANGTSNDKGTLPLTYFYKPDALFYPHAARNLALAESKYPKVGYPYPPKTSRFLVMLREPIGRTFSSWSFKVESGGGKETRPWVESVRHGLGVLASTLNCLDRETKKGSSVGLALENMCAATHFDPRSSYFHHVMKSVYSLQFEVWFKRFSKSQFHILFMEDFIRDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHTLDAPTKGTREALDLAFAPFNCRLAQQL
Sbjct: 1 AVAAATNTAIKIAPAAKAKVPNACHKNNKDTSTCVPTAYFIGASKCATTSFALAFKEHPFMRGVAWGHESEALSHGAPCPSSHMVNSVKAHMSCTSDGANVGGLEVKLSNSKRLYANGTSNDKGTLPLTYFYKPDALFYPHAARNLALAESKYPKVGYPYPPKTSRFLVMLREPIGRTFSSWSFKVESGGGKETRPWVESVRHGLGVLASTLNCLDRETKKGSSVGLALENMCAATHFDPRSSYFHHVMKSVYSLQFEVWFKRFSKSQFHILFMEDFIRDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHTLDAPTKGTREALDLAFAPFNCRLAQQL 356
BLAST of mRNA_H-akashiwo_Contig1155.5.1 vs. uniprot
Match: A0A7S3YGB4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGB4_HETAK) HSP 1 Score: 306 bits (783), Expect = 2.790e-97 Identity = 170/315 (53.97%), Postives = 211/315 (66.98%), Query Frame = -1
Query: 1 ALAFKEHPFMRGVA-WGHESEALSHGAPCPSSHMVNSVKAHMSCTSDGAN-VGGLEVKLSNSKRLYANGTSN-DKGTLPLTYFYKPDALFYPHAARNLALAESKYPKVGYPYPPKTSRFLVMLREPIGRTFSSWSFKVES-----GGGKETRPWVESVRHGLGVLASTLNCLD-RETKKGSSVGLALENMCAATHF-DPRSSYFHHVMKSVYSLQFEVWFKRFSKSQFHILFMEDFIRDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHTLDAPTKGTREALDLAFAPFNCRLAQQL 915
ALAF +HPFMR +A + E++AL+HG ++ +DG V LE++ S RL+ GTSN +GT PLTYFYKP L++P A NLALAE+K+P GY + RFLVMLR+PI RTFSSWSFKVE+ G+E+R W E+V+ L L+S L CLD R +S ALE+ CAA H D + Y HHVMKS+YSLQFEVWF RF K+QFHILFMEDF+RDP+ +LE TLDFFGVPM+D +GKWGYP+R+ A KV+ KN+T + H L APT+ T E LD FAPFNC LAQQL
Sbjct: 2 ALAFFKHPFMRSIAPYNEETDALTHG--------------NIKVGNDGDYYVTKLEIRQDRSSRLFTTGTSNGQRGTFPLTYFYKPHTLYFPKGAINLALAEAKFPDHGYTNWQEVRRFLVMLRDPISRTFSSWSFKVETTTKLGAKGRESRAWPEAVQDELSTLSSVLTCLDERIVGSNTSTASALEDACAAPHLNDQHNQYLHHVMKSIYSLQFEVWFNRFPKTQFHILFMEDFMRDPLGSLETTLDFFGVPMLDGDEGKWGYPTRQAAMKVLGKEKNKTPQEIHKLRAPTEETHEVLDKTFAPFNCYLAQQL 302
BLAST of mRNA_H-akashiwo_Contig1155.5.1 vs. uniprot
Match: A0A7S3XPB6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPB6_HETAK) HSP 1 Score: 288 bits (736), Expect = 3.200e-88 Identity = 162/327 (49.54%), Postives = 204/327 (62.39%), Query Frame = -1
Query: 1 TCVPTAYFIGASKCATTSFALAFKEHPFMRGVAWGHESEALSHGAPCPSSHMVNSVKAHMSCTSDGANVGGLEVKLSNSKRLYANGTSNDKGTLPLTYFYKPDALFYPHAARNLALAESKYPKVGYPYPPKTSRFLVMLREPIGRTFSSWSFKVESGGGKETRPWVESVRHGLGVLASTLNCLDRETKKGSSVGLAL-ENMCAATHFDPRSSYFHHVMKSVYSLQFEVWFKRFSKSQFHILFMEDFIRDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHT--LDAPTKGTREALDLAFAPFNCRLAQQL 972
TC PT YFIG SK ATTS ++AF +HPFM G+A G+E AL +G P S S ++ A G KL + +N +PL Y YKP+ ++YP AA+N+ +E ++ + GYPY P+ RFLVMLREP+ RTFSSW+FK GKETRPW +V GL LASTL+CL + + SS + L E+ C+ HFDPR HHVMKSVYSLQFE+WF F + FH+LFMEDFI PV LE TL F G+ M+DE +G GY + + A K V TV NQTK KK+ L PT+ T + L + F PFNCRLAQQL
Sbjct: 117 TCKPTMYFIGVSKSATTSLSVAFIQHPFMHGLAHGNECAALLYGVPRGLSSRWQSCSTGKCEFTEKA--GTKYAKLLVEQDWMGGNATN----MPLIYLYKPNTMYYPLAAKNVFESERQFQRAGYPYQPEGPRFLVMLREPVSRTFSSWAFKWSMDTGKETRPWESAVYGGLATLASTLDCLYKGSHDWSSTDIRLLESECSTNHFDPRLFTLHHVMKSVYSLQFELWFSYFPSTSFHVLFMEDFIDKPVRALETTLAFLGLSMLDENEGVRGYKTLEEAIKAVTTVLNQTKDKKNPPKLTHPTEDTVKQLSMVFEPFNCRLAQQL 437
BLAST of mRNA_H-akashiwo_Contig1155.5.1 vs. uniprot
Match: A0A7S3XM09_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM09_HETAK) HSP 1 Score: 111 bits (278), Expect = 1.220e-25 Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = -1
Query: 1 RDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHTLDAPTKGTREALDLAFAPFNCRLAQQL 234
R V + E TL+F G+PM+DE +GKWGYP+R+ EKV+R+VKN+T+ KKHTL APT+ T+E LDLAFAPFNCRLAQQL
Sbjct: 3 RRSVGSFEATLNFLGLPMLDEDEGKWGYPTREKVEKVLRSVKNKTRDKKHTLTAPTEETQEVLDLAFAPFNCRLAQQL 80
BLAST of mRNA_H-akashiwo_Contig1155.5.1 vs. uniprot
Match: A0A8J2SXJ9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXJ9_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 9.230e-15 Identity = 88/327 (26.91%), Postives = 125/327 (38.23%), Query Frame = -1
Query: 1 PTAYFIGASKCATTSFALAFKEHPFMRGVAWGHESEALSHGAPCPSSHMVNSVKAHMSCTSDGANVGGLEVKLSNSKRLYANGTSNDKGTLPLTYFYKPDALFYPHAARNLALAESKYPKVGYPYPPKTSRFLVMLREPIGRTFSSWSFKVESGGGKETRPWVESVRHGLGVLASTLNCL------DRETKKGSSVGLALENMCAATHFDPRSSYFHHVMKSVYSLQFEVWFKRFSKSQFHILFMEDFIRDPVENLEVTLDFFGVPMVDEGKGKWGYPSRKVAEKVVRTVKNQTKGKKHTLDAPTKGTREALDLAFAPFNCRLAQQL 963
PT +FIG+SKCAT+S A A HP + A G + +H V + KA + +RL A N K + Y P+ LF A ++ ++ RFLV LREP+ R SSW FK +GGG ETR + V G + CL DR + + L H + HV K +Y Q WF R + +F ++ +E F + + L L F GVP + G G+ S + N + T +E L +A NC L + L
Sbjct: 22 PTFFFIGSSKCATSSIAAALARHPAITSHA-GQGGQGEAHVFDGDHRAHVKNAKALL-------------------RRLQAKLRKNPKPGALASMEYTPEYLF---EANHVPACLCGALQLTAAARCANRRFLVTLREPVARAVSSWQFKSRAGGG-ETRSFRRVVEEGAALARGMRACLRAHGGGDRAAVRACPIDRYLT---PPPHGHHQQISLSHVGKGLYVYQLRAWFARVPRERFLVVPIEQFYANATDGLARVLAFVGVPAL----GARGFASAHALKAAAEIHVNDARPSLALRAQVTDALKEQLAAVYAEPNCELDRLL 317 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1155.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1155.5.1 >prot_H-akashiwo_Contig1155.5.1 ID=prot_H-akashiwo_Contig1155.5.1|Name=mRNA_H-akashiwo_Contig1155.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=248bp QLLGQPAVEGGKGQVQGFPGPLGRRVQRVLLPLGLVLHRAHHLLGHFPRGback to top mRNA from alignment at H-akashiwo_Contig1155:130292..131674+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1155.5.1 ID=mRNA_H-akashiwo_Contig1155.5.1|Name=mRNA_H-akashiwo_Contig1155.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1383bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:130292..131674+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1155:130292..131674+ >mRNA_H-akashiwo_Contig1155.5.1 ID=mRNA_H-akashiwo_Contig1155.5.1|Name=mRNA_H-akashiwo_Contig1155.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=744bp|location=Sequence derived from alignment at H-akashiwo_Contig1155:130292..131674+ (Heterosigma akashiwo CCMP452)back to top |