mRNA_H-akashiwo_Contig1153.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1153.1.1
Unique NamemRNA_H-akashiwo_Contig1153.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A7S4DAL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAL7_HETAK)

HSP 1 Score: 623 bits (1607), Expect = 1.270e-215
Identity = 301/390 (77.18%), Postives = 349/390 (89.49%), Query Frame = 1
Query:    1 LITPSEVVKAFEEISPFKAVPDDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMD-VHAFQDFQGWADDLVAGFEFNYSTSL-FDDFLV-ATREKLELVFQWGVDNKASFNDKTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            L+TP EVVKAF +I+PFKAVPD IIPFL+KTAIHE+K  LAL++NSCL+IGYFS++WK+G LSVLPKPGKDDYS++KSYRPITLLPVLGKGFEK+LLERLNHHA++ SWFHLAQ GFTKGFSC+VAVL+FVQ+VQRAW++KSAFLAFFLDISGAFD+CWHPLVLKTLIDKGCPRYLV II DYL DRKVTLS GGV++SKILT GCPQGGVLSPFIWKLYIN+LLEL++ +H   DFQGWADDLV G+EF+YS+S+ FD+FL      KLELVFQWG DNKASFNDKTKMVLFQS +LKK+LPFE  S++TSVGELK S SA LLGV+LD++L+WH N  KNI SA K+SFQ+VN+AKRMGY  DS++F++L  YTSVVESRLFYCCLAW
Sbjct:   69 LVTPDEVVKAFGDIAPFKAVPDGIIPFLVKTAIHEVKHTLALIFNSCLKIGYFSVLWKRGFLSVLPKPGKDDYSILKSYRPITLLPVLGKGFEKLLLERLNHHASVGSWFHLAQLGFTKGFSCDVAVLEFVQKVQRAWSRKSAFLAFFLDISGAFDKCWHPLVLKTLIDKGCPRYLVNIINDYLHDRKVTLSSGGVSLSKILTTGCPQGGVLSPFIWKLYINSLLELLERIHGSDDFQGWADDLVVGYEFHYSSSIRFDEFLADVVLPKLELVFQWGRDNKASFNDKTKMVLFQSSHLKKHLPFELFSIDTSVGELKRSTSATLLGVILDENLTWHLNTCKNIRSAEKVSFQLVNYAKRMGYPRDSRMFKVL--YTSVVESRLFYCCLAW 456          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A821WEK4_9NEOP (Hypothetical protein n=2 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821WEK4_9NEOP)

HSP 1 Score: 199 bits (507), Expect = 2.630e-53
Identity = 129/390 (33.08%), Postives = 204/390 (52.31%), Query Frame = 1
Query:    7 TPSEVVKAFEEISPFKAVPDD-IIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMD---VHAFQDFQGWADDLVAGFEFNYSTSLFDDFLVATREKLELVFQWGVDNKASFND-KTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            TP E+ +     +P KA   D +   +   AI    D    + N CL +GYF  IWKK  + VL KPGKDDY+  KSYRPI LLPVLGK  EK++++RLN H  L     L Q+GF      E A+   +++++   + K       LDI GAFD  W P +   L ++ CP  L  ++++YL DR+V + YGG   ++    GC QG +  P +W L ++ LL+ ++   V+A    Q +ADD+V  FE N  T+L  + L    + L  + +WG  NK  F   KTK +L  +      L ++   LN     +  S S  +LG+ +D  +++  ++    + A+ + ++ V+ A R+ +    ++ +++  YT+VVE  + Y   AW
Sbjct:  135 TPKELAECARSFNPKKAPGGDGLTSDICGEAIFADPDVFLALANRCLDLGYFPSIWKKATVIVLKKPGKDDYNQPKSYRPIGLLPVLGKIMEKMMVKRLNWH--LIPRLSLKQYGFMPQRGTEDALYTLMRKIKLGLSNKKLITLISLDIEGAFDNAWWPAICVRLTEERCPPNLALLVRNYLGDREVRVVYGGAVAARPTNKGCVQGSISGPTLWNLLLDPLLQTLERAGVYA----QAFADDVVLLFESN--TALETEKLA--NDALTQICEWGHKNKLRFAPAKTKAMLMTN-----KLKYDTPRLNMGGTPIHMSNSVKILGLTIDHKITFSDHINAACNKAIGL-YKQVSKAARVSWGLSPEIIKII--YTAVVEPIVLYAANAW 506          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: UPI001F149310 (uncharacterized protein LOC124541478 n=1 Tax=Vanessa cardui TaxID=171605 RepID=UPI001F149310)

HSP 1 Score: 189 bits (480), Expect = 1.310e-49
Identity = 127/387 (32.82%), Postives = 187/387 (48.32%), Query Frame = 1
Query:    7 TPSEVVKAFEEISPFKAVP-DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDLVAGFEFNYSTSLFDDFLVATREKLELVFQWGVDNKASFND-KTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            T  E+      ISP KA   D     + K A   L      + N CL +GYF  +WKK  + +L KP K+ Y   KSYRPI LLP+ GK  EK +  RL             Q+GFT   S E A+ D V+ +Q    KK       LDI GAFD  W P++LK LIDK     L CI+  YL +R++ ++Y G   ++    GC QG    P +W L ++ LL   D H     Q +ADD++     + S  L +       E LE +  WG +NK  F   KT+ ++     + K + +E  +      +L+ SQ   LLGV LD  L+++ +L++    A+ + +++V  A R  +  +  + R +  Y +VVE  + Y C  W
Sbjct:  190 THQEIKHVINNISPSKAPGLDGFTADICKMAYEALPTTFLNIINKCLTLGYFPKLWKKAYIRILRKPNKNAYRHPKSYRPIGLLPINGKILEKAICNRLTWSLGSRGITSPRQYGFTPQRSTEDALYDAVELIQEGVRKKIIVAVISLDIEGAFDNAWWPMILKQLIDKEIDNDLFCILSSYLSEREIVVNYAGTQATRKTDRGCIQGSTGGPLMWNLLMDPLLWEAD-HLEAHVQAFADDILVIAAASDSMELSNK----VNEALERITAWGDNNKLRFAPHKTQAII-----VTKKIKYEKPNFKIYDKKLEISQHLTLLGVTLDPALNFYTHLDRVTGKAIGL-YRMVARAARASWGLNPAIIRTI--YRTVVEPTILYACSVW 563          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A8J2WP06_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WP06_9CRUS)

HSP 1 Score: 189 bits (480), Expect = 2.390e-49
Identity = 129/395 (32.66%), Postives = 195/395 (49.37%), Query Frame = 1
Query:    1 LITPSEVVKAFEEISPFKAVP--DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDLVAGFEFNYSTSLFDDFLVATREKLEL----VFQWGVDNKASFN--DKTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            ++T  E+V A + ++ +KA P  D I   +IK     +K  L  + + C+++ +F   WK   + ++ KP K  Y  + ++RPI+L+  L K  EK++L RL  H++   W    Q GF  G S E A    V   +   + K      FLDI  AFD  WHP VL  LI +GCP YLV ++  +L +R   L++ G T S     GCPQGGVLSPF+W + I+ +L L     F    G+ADDL        +TS   D   ATR  L+L    V  W + NK S +      M+++       +L   +LS+N +   +  S     LG  +D  L W  ++E+ I +A K  F + ++ +    + D    RL +LY + VE  + Y C  W
Sbjct:  906 IVTVDELVAAVDSLN-YKAAPGNDGISAAIIKECFPVIKMHLLFIVSECVRLNFFPQPWKSSKVIIIGKPNKPSYDTLSNFRPISLINNLAKVLEKIVLSRLQWHSSTDRWLSPNQHGFMAGRSTESAGHALVSFCEAGISNKCITACAFLDIKSAFDAAWHPAVLAALIRRGCPAYLVKLVASFLSNRLALLAHKGSTASFTTNLGCPQGGVLSPFLWSVLIDDVLRLNFDFVFC-VVGYADDLTL------ATS-HKDPAQATRN-LQLMCNHVLSWCIQNKMSLSAVKSVFMLIYNKIVDGSDL---YLSINGTC--IHPSPDTQFLGFTVDSRLKWSLHVERKIAAAKKAFFSLRSYLRATWGYDD---LRLRYLYQAAVEPIVLYGCSLW 1282          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A8J2S0X8_9CRUS (Hypothetical protein n=3 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S0X8_9CRUS)

HSP 1 Score: 188 bits (477), Expect = 5.470e-49
Identity = 128/395 (32.41%), Postives = 195/395 (49.37%), Query Frame = 1
Query:    1 LITPSEVVKAFEEISPFKAVP--DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDLVAGFEFNYSTSLFDDFLVATREKLEL----VFQWGVDNKASFN--DKTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            ++T  E+V A + ++ +KA P  D I   +IK     +K  L  + + C+++ +F   WK   + ++ KP K  Y  + ++RPI+L+  L K  EK++L RL  H++   W    Q GF  G S E A    V   +   + K      FLDI  AFD  WHP VL  LI +GCP YLV ++  +L +R   L++ G T S  +  GCPQ GVLSPF+W + I+ +L L     F    G+ADDL        +TS   D   ATR  L+L    V  W + NK S +      M+++       +L   +LS+N +   +  S     LG  +D  L W  ++E+ I +A K  F + ++ +    + D    RL +LY + VE  + Y C  W
Sbjct:  450 IVTVDELVAAVDSLN-YKAAPGYDGISAAIIKECFPVIKMHLLFIVSECVRLNFFPQPWKSSKVIIIGKPNKPSYDTLSNFRPISLINNLAKVLEKIVLSRLQWHSSTDRWLSPNQHGFMAGRSTESAGHALVSFCEAGISNKCITACAFLDIKSAFDAAWHPAVLAALIRRGCPAYLVKLVASFLSNRLALLAHKGSTASFTINLGCPQSGVLSPFLWSVLIDDVLRLNFDFVFC-VVGYADDLTL------ATS-HKDPAQATRN-LQLMCNHVLSWCIQNKMSLSAVKSVFMLIYNKIVDGSDL---YLSINGTC--IHPSPDTQFLGFTVDSRLKWSLHVERKIAAAKKAFFSLRSYLRATWGYDD---LRLRYLYQAAVEPIVLYGCSLW 826          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A8J2W9B7_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2W9B7_9CRUS)

HSP 1 Score: 186 bits (472), Expect = 2.020e-48
Identity = 127/395 (32.15%), Postives = 195/395 (49.37%), Query Frame = 1
Query:    1 LITPSEVVKAFEEISPFKAVP--DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDLVAGFEFNYSTSLFDDFLVATREKLEL----VFQWGVDNKASFN--DKTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            ++T  E+V A + ++ +KA P  D I   +IK     +K  L  + + C+++ +F   WK   + ++ KP K  Y  + ++RPI+L+  L K  EK++L RL  H++   W    Q GF  G S E A    V   +   + K      FL I  AFD  WHP VL  LI +GCP YLV ++  +L +R   L++ G T S  +  GCPQGGVLSPF+W + I+ +L L     F    G+ADDL        +TS   D   ATR  L+L    V  W + NK S +      M+++       +L   +LS+N +   +  S     LG  +D  L W  ++E+ I +A K  F + ++ +    + D    RL +LY + +E  + Y C  W
Sbjct:  191 IVTVDELVAAVDSLN-YKAAPGNDGISAAIIKECFPVIKMHLLFIVSECVRLNFFPQPWKSSKVIIIGKPNKPSYDTLSNFRPISLINNLAKVLEKIVLSRLQWHSSTDRWLSPNQHGFMAGRSTESAGHALVSFCEAGISNKCITACAFLYIKSAFDAAWHPAVLAALIRRGCPAYLVKLVASFLSNRLALLAHKGSTASFSINLGCPQGGVLSPFLWSVLIDDVLRLNFDFVFC-VVGYADDLTL------ATS-HKDPAQATRN-LQLMCNHVLSWCIQNKMSLSAVKSVFMLIYNKIVDGSDL---YLSINGTC--IHPSPDTQFLGFTVDSRLKWSLHVERKIAAAKKAFFSLRSYLRATWGYDD---LRLRYLYQAAIEPIVLYGCSLW 567          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A8J2S4J2_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S4J2_9CRUS)

HSP 1 Score: 175 bits (444), Expect = 2.530e-48
Identity = 90/254 (35.43%), Postives = 136/254 (53.54%), Query Frame = 1
Query:   64 DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDLVAGFEFNYSTSLFDDFLVATREKL-ELVFQWG 822
            D +    +K +I  +   +  ++N+C+   YF   W+   + VL KP KD Y  + S+RPI++L  L K FE++L  RL   A  + WF   Q GF +G S E AV D V  ++ +W  K      FLDI  AFD  WHP++L  LI K CPRYL+ +I+ +L DR  T+S     +   L  GCPQG +LSPF+W + + +L  L   + F+    +ADD++       +TS+  +  V+  + +   V  WG
Sbjct:   63 DGLSTIWLKLSIEHVMPLIESIFNACVSFNYFPPSWRSAKVIVLKKPNKDCYETVSSFRPISILNSLSKVFERILYTRLKKLAVDNQWFSHNQHGFREGKSTETAVTDLVNHIECSWKAKKTVACAFLDIKSAFDAAWHPMILPGLICKDCPRYLIKLIEAFLLDRTATISSNDEELCTTLEVGCPQGSILSPFLWNILLESLFLLSFSYDFKII-AYADDILL-----CATSVLANLAVSNLQLMCNSVVDWG 310          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: A0A8J2WLI2_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WLI2_9CRUS)

HSP 1 Score: 178 bits (451), Expect = 2.780e-48
Identity = 117/373 (31.37%), Postives = 177/373 (47.45%), Query Frame = 1
Query:   91 TAIHELKDALALVYNSC------------LQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDF-QGWADDLVAGFEFNYSTSLFDDFLVATREKL--ELVFQWGVDNKASFND-KTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW 1161
            T I +L  +L L  + C            L  G+F   WK   ++++ KP K  Y +++SY+PI++LP   K FE+++L RL   A   SWF+  Q GF +G S E A  D V  ++  ++ K    + F+DI  AFD  WHP ++  L+ K CP YLV II DYL +RK  +   G  I   ++ GCPQGG+LS F+W   I+ +  +     F  F   +ADDL        + S  D  L  +R  +    V  W    +   N  KT  ++F      + LP   LSL      +  S S  +LG  +D  L W K+++    SA ++ + + +          +   RLL LY  ++E  + Y C  W
Sbjct:   17 TGIDQLSSSLILATHPCYVHTLLEILNVSLSNGWFPSPWKIAKITIIQKPNKSIYELLESYQPISVLPTFSKIFERIILSRLKSIAAEGSWFNPGQHGFREGCSTETAAHDLVHHIETHFSNKEFTASAFVDIKAAFDSAWHPAIIAALLKKNCPLYLVRIIGDYLTNRKAHIDIDGHLIETDISTGCPQGGILSAFLWITLIDDVFNIF--LPFPVFISAYADDLTI------ACSHSDPTLATSRLNIACNAVVDWLFSIRLLINPPKTIFMIFDFRRSNRLLPAN-LSLTLQGTTIFPSTSTTVLGFHIDNILCWKKHIDLKCTSATRLFYSMRHCLPLTWGLNRA---RLLSLYKLIIEPTILYGCSIW 377          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: UPI001FA23F1B (Uncharacterized protein n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001FA23F1B)

HSP 1 Score: 185 bits (470), Expect = 5.050e-48
Identity = 111/364 (30.49%), Postives = 187/364 (51.37%), Query Frame = 1
Query:   64 DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDL---VAGFEFNYSTSLFDDFLVATREKLELVFQWGVDNKASFNDKTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFY 1146
            D I P ++K+      D +  +YN CL++ Y   +WK   + +LPKPG+DDYS   +YRPI L+ VLGK  E+++  R+ +H   +      Q+GF  G S + A+L+    +  A +K        LDI GAFD  WHP V+  +I    P+YL+ +I  Y  +R++T+SYGGVT +K    G  QG +L P +W L +N LL   +     + Q +ADD+   VA    NY +       +   + LE+   WG   K +F++    +++ S  + + + +  + +N SV  +   +   +LG++ D  L +  +++  +  A +++  I   A++  Y     V R++  Y S+ E  L Y
Sbjct: 1064 DGISPKIVKSFWLFFPDIMLAIYNGCLRLNYVPYLWKSSIIRILPKPGRDDYSKTNAYRPIGLISVLGKVLERIMSIRITNHLINNGHMSHHQYGFMAGKSTDHALLNLHNDIDTAISKFKHVCLISLDIRGAFDHTWHPFVIDQMIKYRTPKYLIQLINAYQNNRRITVSYGGVTCNKTTNRGTVQGSILGPLMWNLVVNDLL-CKNFGFDVNIQAYADDVTMVVACDCINYMS-------IKINKILEMAACWGRKCKLTFSESKTKIMYVSKRIARPI-YSPVRMNGSV--IDPVKEIKILGIIFDHKLDYRPHIKHVVSKATRVNKSITGIARK-SYGLSPAVLRMI--YHSITEPILSY 1413          
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Match: UPI001F8956A0 (Uncharacterized protein n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F8956A0)

HSP 1 Score: 185 bits (469), Expect = 6.330e-48
Identity = 112/364 (30.77%), Postives = 186/364 (51.10%), Query Frame = 1
Query:   64 DDIIPFLIKTAIHELKDALALVYNSCLQIGYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERLNHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLDISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISKILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDL---VAGFEFNYSTSLFDDFLVATREKLELVFQWGVDNKASFNDKTKMVLFQSPYLKKNLPFEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQIVNFAKRMGYFPDSKVFRLLHLYTSVVESRLFY 1146
            D I P ++K+      D +  +YN CL++ Y   +WK   + +LPKPG+DDYS   +YRPI L+ VLGK  E+++  R+ +H   +      Q+GF  G S + A+L+    +  A +K        LDI GAFD  WHP V+  +I    P+YLV +I  Y  +R++T+SYGGVT +K    G  QG +L P +W L +N LL   +       Q +ADD+   VA    NY +       +   + LE+   WG   K +F++    +++ S  + + + +  + +N SV  +   +   +LG++ D  L +  +++  +  A +++  I   A++  Y     V R++  Y S+ E  L Y
Sbjct:  581 DGISPKIVKSFWLFFPDIMLAIYNGCLRLNYVPYLWKSSIIRILPKPGRDDYSKTNAYRPIGLISVLGKVLERIMSIRITNHLINNGHMSHHQYGFMAGKSTDHALLNLHNDIDTAISKFKHVCLISLDIRGAFDHTWHPFVIDQMIKYRTPKYLVQLINAYQNNRRITVSYGGVTCNKTTNRGTVQGSILGPLMWNLVVNDLL-CKNFGFDVKIQAYADDVTMVVACDCINYMS-------IKINKILEMAACWGRKCKLTFSESKTKIMYVSKRIARPI-YSPVRMNGSV--IDPVKEIKILGIIFDHKLDYRPHIKHVVSKATRVNKSITGIARK-SYGLSPAVLRMI--YHSITEPILSY 930          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1153.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DAL7_HETAK1.270e-21577.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A821WEK4_9NEOP2.630e-5333.08Hypothetical protein n=2 Tax=Pieris macdunnoughi T... [more]
UPI001F1493101.310e-4932.82uncharacterized protein LOC124541478 n=1 Tax=Vanes... [more]
A0A8J2WP06_9CRUS2.390e-4932.66Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A8J2S0X8_9CRUS5.470e-4932.41Hypothetical protein n=3 Tax=Daphnia galeata TaxID... [more]
A0A8J2W9B7_9CRUS2.020e-4832.15Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A8J2S4J2_9CRUS2.530e-4835.43Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A8J2WLI2_9CRUS2.780e-4831.37Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
UPI001FA23F1B5.050e-4830.49Uncharacterized protein n=1 Tax=Dermatophagoides f... [more]
UPI001F8956A06.330e-4830.77Uncharacterized protein n=1 Tax=Dermatophagoides f... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1153contigH-akashiwo_Contig1153:1721..2881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog7070.TC011588-PA
PFAMsExo_endo_phos_2,RVT_1
Model size1161
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.6e-44
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,3AIZ4@33154|Opisthokonta,3C6SA@33208|Metazoa,3DMRK@33213|Bilateria,4221W@6656|Arthropoda
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size1161
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387099.1856444-CDS-H-akashiwo_Contig1153:1720..28811681387099.1856444-CDS-H-akashiwo_Contig1153:1720..2881Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1153 1721..2881 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1153.1.1prot_H-akashiwo_Contig1153.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1153 1721..2881 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1153.1.1

>prot_H-akashiwo_Contig1153.1.1 ID=prot_H-akashiwo_Contig1153.1.1|Name=mRNA_H-akashiwo_Contig1153.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=387bp
LITPSEVVKAFEEISPFKAVPDDIIPFLIKTAIHELKDALALVYNSCLQI
GYFSIIWKKGCLSVLPKPGKDDYSVIKSYRPITLLPVLGKGFEKVLLERL
NHHATLSSWFHLAQFGFTKGFSCEVAVLDFVQRVQRAWAKKSAFLAFFLD
ISGAFDRCWHPLVLKTLIDKGCPRYLVCIIKDYLCDRKVTLSYGGVTISK
ILTAGCPQGGVLSPFIWKLYINTLLELMDVHAFQDFQGWADDLVAGFEFN
YSTSLFDDFLVATREKLELVFQWGVDNKASFNDKTKMVLFQSPYLKKNLP
FEFLSLNTSVGELKNSQSAVLLGVVLDQHLSWHKNLEKNIHSAVKISFQI
VNFAKRMGYFPDSKVFRLLHLYTSVVESRLFYCCLAW
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mRNA from alignment at H-akashiwo_Contig1153:1721..2881-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1153.1.1 ID=mRNA_H-akashiwo_Contig1153.1.1|Name=mRNA_H-akashiwo_Contig1153.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1161bp|location=Sequence derived from alignment at H-akashiwo_Contig1153:1721..2881- (Heterosigma akashiwo CCMP452)
TTGATCACTCCTAGTGAGGTAGTGAAAGCTTTCGAGGAGATTTCTCCTTT CAAAGCTGTTCCTGATGATATTATTCCTTTTTTGATTAAAACTGCTATAC ACGAGCTGAAAGATGCTTTGGCTTTAGTGTACAATTCTTGTCTTCAGATC GGTTACTTCTCTATCATATGGAAAAAAGGCTGTCTCTCCGTACTTCCTAA GCCAGGCAAAGATGACTACTCAGTTATCAAGTCCTACAGACCGATCACCT TGTTGCCTGTGTTGGGTAAAGGTTTTGAAAAAGTGTTACTAGAACGTCTT AACCATCATGCCACTTTAAGTTCATGGTTTCATTTAGCTCAGTTTGGCTT TACAAAAGGTTTCTCCTGTGAGGTGGCTGTTCTTGATTTTGTCCAGAGAG TTCAGCGAGCATGGGCCAAAAAATCTGCTTTCCTTGCATTTTTTCTAGAT ATTTCCGGTGCTTTTGATAGGTGTTGGCATCCTCTTGTGCTGAAGACCCT GATTGATAAAGGTTGTCCTAGGTATCTTGTTTGCATCATAAAGGACTACC TTTGTGATAGGAAGGTTACACTCTCATATGGTGGGGTGACAATTAGCAAA ATACTGACAGCAGGCTGCCCACAGGGTGGTGTACTCTCGCCATTCATTTG GAAGCTATATATAAACACCTTACTAGAACTAATGGATGTTCATGCTTTCC AAGATTTCCAAGGGTGGGCAGATGATCTTGTTGCTGGCTTTGAATTTAAT TACTCGACATCCTTGTTTGACGATTTTCTCGTTGCAACCCGGGAAAAACT TGAACTGGTTTTCCAATGGGGTGTAGATAACAAAGCTTCTTTTAACGACA AAACAAAAATGGTTCTCTTTCAATCACCTTATCTAAAGAAAAATCTACCT TTTGAGTTTCTCAGCCTTAATACTAGTGTCGGTGAATTGAAAAATTCGCA GTCTGCTGTACTACTTGGAGTTGTCTTGGATCAACACTTATCATGGCATA AAAACTTGGAAAAAAACATTCATTCTGCAGTAAAAATTTCATTTCAAATT GTCAACTTTGCGAAACGTATGGGTTATTTCCCGGACTCCAAGGTATTTCG TCTTTTGCATTTGTACACCAGTGTAGTAGAGTCTAGGTTGTTCTACTGTT GTTTAGCTTGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1153:1721..2881-

>mRNA_H-akashiwo_Contig1153.1.1 ID=mRNA_H-akashiwo_Contig1153.1.1|Name=mRNA_H-akashiwo_Contig1153.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1161bp|location=Sequence derived from alignment at H-akashiwo_Contig1153:1721..2881- (Heterosigma akashiwo CCMP452)
TTGATCACTCCTAGTGAGGTAGTGAAAGCTTTCGAGGAGATTTCTCCTTT
CAAAGCTGTTCCTGATGATATTATTCCTTTTTTGATTAAAACTGCTATAC
ACGAGCTGAAAGATGCTTTGGCTTTAGTGTACAATTCTTGTCTTCAGATC
GGTTACTTCTCTATCATATGGAAAAAAGGCTGTCTCTCCGTACTTCCTAA
GCCAGGCAAAGATGACTACTCAGTTATCAAGTCCTACAGACCGATCACCT
TGTTGCCTGTGTTGGGTAAAGGTTTTGAAAAAGTGTTACTAGAACGTCTT
AACCATCATGCCACTTTAAGTTCATGGTTTCATTTAGCTCAGTTTGGCTT
TACAAAAGGTTTCTCCTGTGAGGTGGCTGTTCTTGATTTTGTCCAGAGAG
TTCAGCGAGCATGGGCCAAAAAATCTGCTTTCCTTGCATTTTTTCTAGAT
ATTTCCGGTGCTTTTGATAGGTGTTGGCATCCTCTTGTGCTGAAGACCCT
GATTGATAAAGGTTGTCCTAGGTATCTTGTTTGCATCATAAAGGACTACC
TTTGTGATAGGAAGGTTACACTCTCATATGGTGGGGTGACAATTAGCAAA
ATACTGACAGCAGGCTGCCCACAGGGTGGTGTACTCTCGCCATTCATTTG
GAAGCTATATATAAACACCTTACTAGAACTAATGGATGTTCATGCTTTCC
AAGATTTCCAAGGGTGGGCAGATGATCTTGTTGCTGGCTTTGAATTTAAT
TACTCGACATCCTTGTTTGACGATTTTCTCGTTGCAACCCGGGAAAAACT
TGAACTGGTTTTCCAATGGGGTGTAGATAACAAAGCTTCTTTTAACGACA
AAACAAAAATGGTTCTCTTTCAATCACCTTATCTAAAGAAAAATCTACCT
TTTGAGTTTCTCAGCCTTAATACTAGTGTCGGTGAATTGAAAAATTCGCA
GTCTGCTGTACTACTTGGAGTTGTCTTGGATCAACACTTATCATGGCATA
AAAACTTGGAAAAAAACATTCATTCTGCAGTAAAAATTTCATTTCAAATT
GTCAACTTTGCGAAACGTATGGGTTATTTCCCGGACTCCAAGGTATTTCG
TCTTTTGCATTTGTACACCAGTGTAGTAGAGTCTAGGTTGTTCTACTGTT
GTTTAGCTTGG
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