mRNA_H-akashiwo_Contig115.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig115.4.1
Unique NamemRNA_H-akashiwo_Contig115.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK)

HSP 1 Score: 593 bits (1530), Expect = 6.220e-213
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
Query:    1 MSSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            MSSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL
Sbjct:   45 MSSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 344          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: A0A7S2V4X9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4X9_9STRA)

HSP 1 Score: 365 bits (936), Expect = 1.020e-122
Identity = 188/297 (63.30%), Postives = 224/297 (75.42%), Query Frame = 1
Query:   16 IPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKP--TVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            +PS +KL  AAGGIYGC+L+YGV QEKI+S+ G+D + FT TLFLLL QC VN+  A L +L+ G S   +PQ  FA +GA+YIGAML SNE+LK+VNYPTQALGKSCKMIPVML  V+     YS++EY  VLLIT GIA FQ++GKTKS G  NS FGLFLLF+SL+CDGLTGS Q  L+K  K   TV E M +TN WAV++L +  L TGQ   G+ Y++AN GI  PI +FS TSALGQ FIFFTV+ F  LV +T+TTTRKFFTVLFSV  FGH LTTNHWIAV +VF GL
Sbjct:   56 LPSGVKLFIAAGGIYGCFLTYGVKQEKIYSFEGEDSAKFTATLFLLLFQCTVNAAFAALCLLVFGGSKQDIPQKKFAQIGASYIGAMLCSNEALKYVNYPTQALGKSCKMIPVMLLNVVRGNATYSIREYAQVLLITLGIAAFQLAGKTKSGGAPNSPFGLFLLFLSLSCDGLTGSTQDGLRKTLKSPLTVSESMLYTNAWAVIVLIVANLVTGQFMVGLNYLMANTGILEPIMMFSLTSALGQVFIFFTVNTFGSLVTSTVTTTRKFFTVLFSVVMFGHTLTTNHWIAVLMVFVGL 352          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: T0RGF4_SAPDV (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RGF4_SAPDV)

HSP 1 Score: 323 bits (828), Expect = 4.730e-107
Identity = 169/300 (56.33%), Postives = 204/300 (68.00%), Query Frame = 1
Query:    1 MSSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            M++    S   L     GIY CYLSYG+ QEKIF Y   DG+ FT TLFLL +QCI+NS  A     +  P+   +P   FA     Y+GAML SNE+LKHV+YPTQALGKSCKMIPVML GVL   KKY++KEYL V LIT GI +FQ+   +  SG+ENSY+GL LLFVSLA DG+TG NQ  L    KP+VH+ M  TN+WAVV  AIGCL TGQ   G  + + NP I+S + +FS  SALGQNFI+FT+  F  L CTTITTTRKFFT+L SV  FG+ L+   W  V++VFAGL
Sbjct:    9 MAAAPTSSIAHLATCVSGIYVCYLSYGIFQEKIFKYRDADGAKFTATLFLLCVQCIMNSAVACAATFVWKPTTKSVPLQPFAFSAFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIGRKKYALKEYLSVGLITLGIVVFQLGKASSKSGQENSYYGLGLLFVSLALDGVTGPNQEALSATYKPSVHQQMLNTNVWAVVYTAIGCLVTGQGADGFAFCMRNPEIYSALFLFSVCSALGQNFIYFTIQRFSALTCTTITTTRKFFTILASVLIFGNALSPQSWAGVAIVFAGL 308          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: F0W937_9STRA (Drug/Metabolite Transporter (DMT) Superfamily putat n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W937_9STRA)

HSP 1 Score: 323 bits (829), Expect = 4.960e-107
Identity = 167/305 (54.75%), Postives = 208/305 (68.20%), Query Frame = 1
Query:   10 GNIPSE---LKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQM-----SGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            GN  S+   + L+   GGIY CYLSYG+ QEKIF Y   +   FT TLFLL +QC+ N++ A L   L  P   KMP   FA     Y+GAML SNE+LKHV+YPTQALGKSCKMIPVML GVL   K+YSM+EYLCV+LIT GI MFQ      +  +K S +ENS +GLFLLF SL  DG++G  Q +L +Q KP+VH+ M +TN+WAVV   IG + +G  F+G+ + + NP I   I  FS  SA+GQNFI+FT+  F  L CTTITTTRKFFT+LFSVF FG++LT   W  V++VF GL
Sbjct:   15 GNRSSQTSIVDLLVCVGGIYICYLSYGIFQEKIFRYKDSNYEKFTSTLFLLFIQCVTNTIVAYLATFLWKPQRSKMPLKPFAFTAFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLGNKRYSMQEYLCVVLITLGITMFQFGKMATASPSKHSTQENSMYGLFLLFASLTLDGVSGPKQEQLCQQLKPSVHQQMMYTNLWAVVYTGIGAIFSGHAFTGIRFCMENPTILQSIFYFSICSAMGQNFIYFTIQRFSALTCTTITTTRKFFTILFSVFWFGNQLTWVSWAGVAVVFLGL 319          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.190e-105
Identity = 160/292 (54.79%), Postives = 201/292 (68.84%), Query Frame = 1
Query:   28 LKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            L L    GGIY CYLSYG+ QEKIF+Y    G  FT TLF+L +QC+ N+L A     +  P   +MP   FA     Y+GAML SNE+LKHV+YPTQALGKSCKMIPVML GVL   KKYS +EY CVLLITAGIA+FQ+     K + +ENS +GL LLF+SL  DG++G  Q ++ +  +P+VH+ MF+TN+WAV+    G L TGQ  +G+ +   NP I S +  FS  SALGQNFI+FT+  F  L CTTITTTRKFFT+LFSV  +GH+L+   W  V++VFAGL
Sbjct:    8 LNLAVCIGGIYICYLSYGIFQEKIFTYRTPTGEKFTATLFMLFVQCVTNALVAYAATFVWKPQRPRMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLRRKKYSAREYFCVLLITAGIAVFQLGKASAKHAAQENSSYGLVLLFLSLTLDGVSGPKQEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSWAGVAVVFAGL 299          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.380e-105
Identity = 160/296 (54.05%), Postives = 206/296 (69.59%), Query Frame = 1
Query:   16 IPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSS-GKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            +P E+KL+    GIY CY+  G++QE IF Y  +DG  F+ TLFLL +QC+VN   + + M + G SGDKMP ++F   G  YIGAM+ S E+LK+VN+PT+ LGKSCKMIPVMLFGVLFA K+YS++EYLCV LIT GI  F +SGK  +   KENS +GL LL  SL  DG+TGS Q +LK   KPTVHE+MFF N WA+ IL+     +GQ   G  +  ANP + S +  FS  +A GQNFI++T+S F+PLVCTTITTTRKFFT++ SV  FGH +    W  V++VF G+
Sbjct:   21 LPMEVKLVICVLGIYSCYMLSGLLQENIFRYRSEDGGRFSSTLFLLWVQCVVNVAFSFVAMFVNGRSGDKMPHHLFGTAGFAYIGAMVCSIEALKYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSLQEYLCVALITVGIVTFNLSGKPHNKEDKENSTYGLGLLAFSLILDGVTGSAQERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWGGVAMVFTGI 316          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN)

HSP 1 Score: 320 bits (819), Expect = 1.520e-105
Identity = 157/291 (53.95%), Postives = 202/291 (69.42%), Query Frame = 1
Query:   31 KLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
             L+   GGIY CYLSYG+ QEKIF+Y   DG  F+ TLF+L +QC++N+L A     +  P    MP   FA   + Y+GAML SNE+LKHV+YPTQALGKSCKMIPVML GVL   KKY++++Y+CVLLIT GIA+FQ+    +K + +ENS +GL LLF SL  DG++G  Q ++ +  +PTVH+ MF+TN+WAV+    G L TGQ  SG  + + NP I + +  FS  SA GQNFI+FT+  F  L CTTITTTRKFFT+LFSV  +GH LT   WI V++VF GL
Sbjct:   27 NLLICIGGIYVCYLSYGIFQEKIFTYRTXDGEKFSATLFMLFVQCVMNALVAYSATFVWRPERPTMPLKPFAVTSSAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLLITTGIAVFQLGKASSKHASQENSTYGLLLLFTSLTLDGISGPKQEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSWIGVAIVFTGL 317          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD)

HSP 1 Score: 318 bits (815), Expect = 4.270e-105
Identity = 159/294 (54.08%), Postives = 203/294 (69.05%), Query Frame = 1
Query:   22 SELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            S L L     GIY CYLSYG+ QEKIF+Y    G  FT TLF+L +QC+ N+L A     +  P    MP   FA     Y+GAML SNE+LKHV+YPTQALGKSCKMIPVM+ GVL   KKY+M+EY+CVLLIT GIA+FQ+    +K + +ENS +GL LLF+SL  DG++G  Q ++ +  +P+VH+ MF+TN+WAV+    G L TGQ FSG  + + NP I + +  FS  SALGQNFI+FT+  F  L CTTITTTRKFFT+LFSV  +GH+L+   WI V++VF GL
Sbjct:   13 SLLNLGVCIAGIYICYLSYGIFQEKIFTYRSPTGDKFTATLFMLFVQCVTNALVAYAATFVWKPQRPSMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMIMGVLIRRKKYTMREYICVLLITVGIAVFQLGKASSKHAAQENSTYGLILLFLSLTLDGVSGPKQEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSWIGVTIVFVGL 306          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA)

HSP 1 Score: 319 bits (817), Expect = 5.510e-105
Identity = 159/300 (53.00%), Postives = 213/300 (71.00%), Query Frame = 1
Query:    1 MSSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMSGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            + S +   ELKL+ A  GIYGCY++  ++QE I+SY   DG  F+QT FLL +QC+VN + AG+ M+L   SG+ +P  +F+  GA YI AM+ S ESL ++N+PT+ LGKSCKMIPVMLFGV+FAGK+YS+++Y+ V LITAGI  F ++GK KS G+ENS +GL LLF+SL  DG+TGS Q  +K+  K TVHE+MF+ N WA+V+L    + TGQ   G  +   NP +   +  F+ T+ALGQNFI+FT+S F  LVCTTITTTRKFFT+LFSV  FGH ++   W  V++VF  L
Sbjct:   29 VKSSSSRDELKLLVAVVGIYGCYMTSAMLQEHIYSYKSPDGGRFSQTQFLLWVQCVVNVIFAGIAMMLAKGSGEAIPHKLFSMAGAGYISAMICSLESLNYINFPTKELGKSCKMIPVMLFGVVFAGKRYSVRDYVGVALITAGIVTFNLAGKHKS-GRENSTYGLALLFMSLVLDGVTGSTQDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQWAGVAMVFTAL 327          
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Match: A0A6A3HCE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HCE6_9STRA)

HSP 1 Score: 315 bits (808), Expect = 5.080e-104
Identity = 161/300 (53.67%), Postives = 203/300 (67.67%), Query Frame = 1
Query:    4 SSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFLLLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL 900
            SS    S L L+    GIY CYLSYG+ QEKIF+Y    G  FT TLFLL +QC+ NSL A     +  P   +MP   FA   A Y+GAML SNE+LKHV++PTQALGKSCKMIPVML GVL   KKY++++Y+CVLLITAGIA+FQ+     K + +ENS +GL LLF SL  DG++G  Q ++  Q +P+VH+ M  TN+WAV+   +G L TGQ   G  + L NP I   +  FS  SALGQNFI+FT+  F  L CTTITTTRKFFT+LFSV  +GH+L+   W+ V++V AGL
Sbjct:    9 SSPRDSSILNLVVCIVGIYTCYLSYGIFQEKIFTYQSPSGGKFTATLFLLFVQCLTNSLVAYAATFVWKPERARMPLGPFALTAAAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYVCVLLITAGIAVFQLGKASAKHAERENSTYGLLLLFSSLTLDGVSGPKQEEIAHQLRPSVHQQMLNTNLWAVLYTGVGALVTGQALEGFFFCLENPAILQSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWVGVAIVNAGL 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig115.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V2XTI4_HETAK6.220e-213100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V4X9_9STRA1.020e-12263.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
T0RGF4_SAPDV4.730e-10756.33Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
F0W937_9STRA4.960e-10754.75Drug/Metabolite Transporter (DMT) Superfamily puta... [more]
A0A5D6XRA2_9STRA1.190e-10554.79Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D7G358_ECTSI1.380e-10554.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2D4BZF8_PYTIN1.520e-10553.95Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3X0M7_GLOUD4.270e-10554.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A835ZCP5_9STRA5.510e-10553.00UAA transporter n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A6A3HCE6_9STRA5.080e-10453.67Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig115contigH-akashiwo_Contig115:400809..410313 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog653948.CCA17649
PFAMsUAA
Model size900
Max annot lvl2759|Eukaryota
KEGG koko:K15275
KEGG TC2.A.7.11.1,2.A.7.11.4
Hectar predicted targeting categoryother localisation
Exons9
Evalue8.13e-108
EggNOG OGsCOG0697@1|root,KOG1580@2759|Eukaryota
DescriptionUDP-galactose transmembrane transporter activity
Cds size900
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig115.4.1prot_H-akashiwo_Contig115.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig115 400809..410313 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387098.4912848-CDS-H-akashiwo_Contig115:400808..4008771681387098.4912848-CDS-H-akashiwo_Contig115:400808..400877Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 400809..400877 -
1681387098.5038874-CDS-H-akashiwo_Contig115:401169..4012641681387098.5038874-CDS-H-akashiwo_Contig115:401169..401264Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 401170..401264 -
1681387098.5119736-CDS-H-akashiwo_Contig115:405427..4055291681387098.5119736-CDS-H-akashiwo_Contig115:405427..405529Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 405428..405529 -
1681387098.5240617-CDS-H-akashiwo_Contig115:408433..4085181681387098.5240617-CDS-H-akashiwo_Contig115:408433..408518Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 408434..408518 -
1681387098.5402422-CDS-H-akashiwo_Contig115:409035..4091451681387098.5402422-CDS-H-akashiwo_Contig115:409035..409145Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 409036..409145 -
1681387098.5553782-CDS-H-akashiwo_Contig115:409333..4094721681387098.5553782-CDS-H-akashiwo_Contig115:409333..409472Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 409334..409472 -
1681387098.5648549-CDS-H-akashiwo_Contig115:409741..4098481681387098.5648549-CDS-H-akashiwo_Contig115:409741..409848Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 409742..409848 -
1681387098.574465-CDS-H-akashiwo_Contig115:409970..4100651681387098.574465-CDS-H-akashiwo_Contig115:409970..410065Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 409971..410065 -
1681387098.584811-CDS-H-akashiwo_Contig115:410215..4103131681387098.584811-CDS-H-akashiwo_Contig115:410215..410313Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig115 410216..410313 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig115.4.1

>prot_H-akashiwo_Contig115.4.1 ID=prot_H-akashiwo_Contig115.4.1|Name=mRNA_H-akashiwo_Contig115.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=300bp
MSSGNIPSELKLIFAAGGIYGCYLSYGVMQEKIFSYVGDDGSTFTQTLFL
LLLQCIVNSLAAGLGMLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLK
HVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQM
SGKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFF
TNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFI
FFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGL
back to top

mRNA from alignment at H-akashiwo_Contig115:400809..410313-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig115.4.1 ID=mRNA_H-akashiwo_Contig115.4.1|Name=mRNA_H-akashiwo_Contig115.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=9505bp|location=Sequence derived from alignment at H-akashiwo_Contig115:400809..410313- (Heterosigma akashiwo CCMP452)
ATGAGCTCTGGGAACATCCCTTCCGAGCTCAAGCTGATTTTTGCAGCCGG CGGGATCTATGGTTGCTATCTGTCTTATGGCGTCATGCAAGAGAAAATGT AAGTTCATACACCCCTTCAGCGATTCCACCATTTCTTGCATCACAGTAAG TATGGACCTATTGTGCACCACGACTTATCAATGTCAACCTGGACCTGAGC TGTCTCCGATCAACAACTCCCTCCCTGTCGCGTGATCCTCAACCACAGTT TCAGCTATGTTGGAGATGATGGATCAACCTTCACCCAGACGCTTTTCCTT CTCCTGCTTCAGTGCATTGTCAACAGTCTGGCAGCCGGACTTGGTGAGCC TCAAGGCAGTGCAATCCGTGCCTTTGCACACTACACTAAAAACAACAACT TGAAGGCCTACAATCTGTCAACGTTTCACCTTTTCCCACTTCACTCCTTG TCCCATTTGCTTCAGGAATGCTACTGCTTGGGCCCAGTGGAGACAAAATG CCACAGAATATGTTTGCTGCAGTTGGGGCAACATACATTGGCGCCATGCT TACAAGCAATGAGTCTTTGAAGGTGTGGTCACAATAAGAACTCCCACCAT GCAGCAAAAAAAACTTATCTAATGCACTCCTCTTCTTCTTTGGCACGTTT ATAAGGGAGGGCGATGCTTTGCTGGAAATTAACGAAGTGATATTCTAAAT TGCAGATACTGTACCAGATGCTCTGCTGGAATTTAGATCTTTTCTGATGT TGACAGCAGGTCATTTGTTGCATTCATACTAATCCAAGAAAGTATTATTT GCTCTGTATTGTGTTATTGTGTTCTTTTCTGATGTTCACAGCATGTCAAC TACCCTACCCAAGCACTCGGAAAATCATGCAAAATGATTCCAGTCATGCT CTTTGGGGTGCTTTTTGCTGGGAAAAAATACTCCATGAAAGAGTACCTTT GCGTACTCCTGATCACTGCGGGGATTGCAAGTAATTGACTAGCTTGCACC TGCTTTTCAGATTTGGACAACCACAACCACCTTTTGTGTATATATAGCTA ATTTTTTAGTACTTGTAGTATATGTACCAACGCCTGCTTTGTTCTTCCTT CTCATTTAGCAATTCATTATGATTTGGCCTTTTATGAATGGCACAAACTG ACTTTAATTAATCTGTAGTGTTCCAGATGTCTGGAAAAACCAAGAGCTCT GGGAAGGAGAACAGCTATTTTGGCCTGTTCTTACTTTTCGTTTCCCTTGC TTGTGATGGTCTAACTGGTTCAAACCAGGTAAGATTTGCGAATTGTAACG GGTGCAAGTACTAGTATAAAAGTAGTGTTACTTTCACATTCTAGGAGGGG ATCCTTTCAAGGCCCCACAAGAGAACACAGTATTGAGCCTTTGACATGCA ATCACTATACCCGTAATGGTTTGGTACGATGCATGTGTGCGTGAGCTCAT TATACATATCCTCAAGCCTTTATACACCTCACACCTCACTTTATTACCTG CCATGAGATCATTTTGCTAGTAGCTGGATAAAATCGAATGATCAAAAAGT TGTACTTTGGCAGGCCAACGAAACTCCCACCAAATGACATGCCAACGAAA CTCCCTTCTCGATTATATTCCGAAACTCAGCCATACTCTACATTGTAAAT TAAGCGCCAAGATTATCAACTTGGTTCCAGCAAACAACACTGCACACTCC AAAACAATCAACTTGGTCCCGTTTCCCGTTAGCAATTCTAACAACTGTTC TTCCAACTTAAACCTGCTTGATGATCACCGATATTGGTTCAACAGAGCAA GCTCAAGAAGCAGGCCAAGCCAACCGTCCACGAACTGATGTTTTTCACCA ACATGTGGGCTGTGGTTATCTTGGCGATCGGTGAGCATTCAAGGACCATG TGCCTTGTCCATTACATGTACTGCCCATATCAGCCGATTCTGACAACTAC TCTAGGATCGTCTTTGTGTACTTGCTTGATTTTCTTCTCTACAAGCTTCA GATTGATTTAGTTGTCAAATATATATATTTCTTTTTTTTGGTCCACATTT TTCATTATACAATGCCACCTCCCACTACACGGTGTCACACTTCACTGTCA TTGTACCTGTAGAGTCGGTGTCAGGCTAAAGTATACAAGAATATGGCTAA ATCCCCCGAGAAAAAAAACACGTTCTACGTGTCGGAAAATCCGGGAAAAT AGCTCAAATTGTAGCCTGCATCCGGATTTTCCGACACGAACTTGTTGCGA TATATATTTTAGATGAGGAGGCAGTTTAGAATTTTTGGTTGAAGGTCATA TGTTTTAAATTGTTTATTGAAGTACAAGCACAAATTGCTTAATGGGTAGC GCGCGTGACTTGCTTTTTAGTTTTACGGTCCGGATTCGAGTCTCGGCGCG TGCCTGCGACACCGATTTGGCCGAAGTTCCCAGAGCGATGTCCCCTTAAG CCTTACACCGACTCTAGCCAATTCTGGCAACTCGTCGGAGCAGTTCCTCG GTTGCCTTTACTGTGTCTGTTGCTACCTGCACCCATCATCGTCCATTTGT GTACAGTTGTCTTCTAAATGAGGAAGGTGCCCTTGTCCCTTTTATGTTTT GTGTATACTGGTGGAGAGCAGTATGCTCGACTGTTCCATATCCCGGGGAT TCTATGACTCTATATCATCCTTTGAAGTTGCCAGGGAGTCAGGCGGAAGG TGAACTGGTTTCAGTTGAAGAAGGATGTGAGTGTGCTGCAGCAAGTAGAG CAGATCTCCGAGGTTTTGGGCTATACCACGCCCTCGCCCATCCAGCAGCT TGCAGGTGAATCCATTAACAGCTTGTTCTCTTCTACTCTCCAGCGAAGGG GGTAGCAGAGGTTGGTCAGGGTTGCGGAGAAAATCAATGCCGCATCACTC TCTTGAATTCCGTTTTGCTTCTTCAAATGTCTTTCTGCAGCTTCCCAGTG GGCCGGGCTTCCATATAATCAATCTTTGAATGGGCATATACATAGAGTGG TAGTATAGTACACAGGAGCATGGTTAGTAAGTGACTCTCCACTGGACTCG TAGGATCATTTTTGGCTCTTCTTCTTGTCCGCACTGCGTGCGTTACAAAA AAAATATAATAAATGCATGCAATTGCACCATGGACCTTCATCTGCACCTG AAGTTCATTTACTGCACCTGATTGTATACTCACTGCACGTGGCGTCACAA GTAAGTGTACTATAATGCTCTGTAAAGGCGGCACACCTTCCGGAATTCAC TACTAATTAAAAAAATAACATTTGTCTCCGTGGAATCATAAAGTGGAGAA ATAGTCCAGCTAGGCTAATGCTACCTCTGCCTGCTGCTCTCGTCACTTTC ATTTTTTTTCTTCGTTCTTTTTTTTCCCCCCTTTCCATGTGGGATTCCAC TCCAAATGGGCCTCTCCCTAAATTTCATGGTCTGCTATTATGCGGCCTAG CACCTCAACAAGGAGGGTGTGGTCCAATGAGCCCCACATGTTTTGTAATC CCTAAACAGTAGTGCTCCAGTGTTATGCATACGTAGTACTGGCTGCAAGG GGCACGGACAGGTTAATGAGCTGCAGTACATGGATGTATCCCACTAGTAG CGCTAACATCATCAAACGAACTGAGGCAGCAAAGAAGCGATCGCATCACA ACGACCTGGCAGAGCGGTAACAGAAGGAGGTCGTCAGCGAAGGATGGTGG CCCGAGGTGCATCAAAGGGATGTTCGCGAGCATTGGAAGGCGCGATGATA CGAGCGCCCATAGGGTTAGGTTGGAGTAGAGGACCTTCACGCCGACAAGC TCACATCGACAAACTCAGAGATGGCTCAACATGACGGTCGGCTGGAGTAG GAGGATGGTGACGAGGCATGAAAACGTATTAAAAAAAATCCCCACTCAAC ACAGCAGTGAGGAACACCCTCAACCACAAAATCCCCACTCATGAAGTTCT TTCACCAACAGCAACACATCAAATAATTCACCCCACTATAAAAAGAACTT CAAAAGACACATGCCGACGACTGCAGTGCAAACCAACAAAAGTGTATTAT ATCCCCCCCCCCCCCATGATTGCTTGAAAGAGAAGAAATACTTCAATTGG TTTCATTTTAGTCTAAGGCAGCCTGAAGAAGGCTGGCGGGGGAAAGAGAG AGCCGCCAGCTGTGGCTTTTATAGTAGACGAAATGCAGCATAGTTGTCAT GGACTTCTTGCCTTCTTGGCAGTATGGAGCTATACTCGCTGATGATGGAA GCGGTTTTCTGTTGAGACCCAACAGCCTGCAATGCTCAAAGCTATTATTC CCTCTCTCTGAAAGAATTAAGTTGATCCTGGGCAAATCAAGTTCTGTGCT GCTTTTTCTCGCTGGCCGTTGGGTTAGTTCTTGTTTTTTTTTTGCATGAT TGTCAATCTTGGCAACGGTATGTGCTTCTGGCAGGAGAAGGAGGAGGAGG GCCTCCATTTCGAGGGTTGTTTAAGAGAGTGCTGATGATGCTACACATTC CCATTCATATTGTTGGACAGCAGTTGTACTATAGCCGAAACCGGTCTGCA ACAGTCCTTTTAATAATATTGGAATCACACATTATAGTTTCATGATGTTG TATTTCATGCGGTATAGCAGTAATTTTGGCCTTGGCCTTAAAGCTTGATG GTGTCCGTGAAGCATTACACTGGGCCAACGTCTTCCTTTTGGAATATCCT ATGCCCTGATCGATGGTCTTAAAATAAAGTGAAAAATGTCACGCCCAGCG TAATTTTCCGTCCCACTCTATTTTCTGCACACAGGATGCCTTGGCACTGG CCAGCTATTCTCTGGAGTCACCTACATTTTGGCCAATCCTGGGATCTGGA GCCCCATTGCTGTTTTCTCAGCGACCAGTGCTCTAGGTAGGTGAACCAGA CAACATATATTGCTGCACATACAGGTAGTTTTGTGGCACAAAGTCCCAGT TTGGTTCTTGGCGTATATATAACTCTAATCATTGTGTACATTTAGGAAAA CCCAACACATCTATCTGATCAAAAACAGGAAGTGTTGTCCAACAGGAAGT ACATTGCAACATGATATATACATATATAATCTATATTTGTCTATGTAGTA CACACCATGCTTCATGCTCTTCATGGTGCCGGTTCATTCCCATATCCTTG ACAGGCGGTGTTACTTCCGCGGTTGTCATGCCGAGATCGCGCCGGTCCGG TACTTGCGGGGTAGTTCCGTCAGGCGTGGCGCATTTCCGGGTCTAGGGCC GCCTGGTCCGTTTTCATTCTCGTCTCACGTCGATATTCCAATCTCTCAAT TGTTCTTGTTCTCGGATTTCGAAGGGGCTCGAACACACGGCCTCTTGCTT GTTCCGAAAGTTGAACTTTCGAACAATTGAGCTCTATGTTGGCGCAAGGT CATACTTTTCGCGAGATGGACAGTATACTTGGACAGCCTTTCTGTTGTGC CAAAAGACATGTACCCCCCTAATTTTGTACGCAGTGCCCGAAAATGAGGT CAAAACTTGCGCCCTTGATCTCCATTACCGTCCATGATGTGTGTGTGAAA TCTTCCAAATGTCGGGCGCCGCCACTACATCGTTAGAAAGCCCGTGCGAA TATATATATTAGTGTTGAGTCCAAGCACCAGGTCAATCGGTTCAGTCCAA GTTCTTCAAAGAAGTGTGTACTTCATTTCCACTTCATTTCCACTATTGTC AAAAACAGGGATTTTTTTTTTGAGACTCTACTCCCAGGTTTGCTTGTTTG TGAATTGACCACATTGGAATTCAAAGTTTAGTCTCTCTTGCGAGCCCAGA TAAAAAATGGCTAAATTGGAAATTCAATAATTTAGCCGGTTTTGTTTTCA AAAGTCGGAGCAAAAAAAAAATTACCTCTACTGGCCATCCAGATAAGCTT TTTCATTCCTCCGTTCTCGGCTAGACCCAGCTTGTTGTATATTTTTGCTT GAGACTCCTGCCAAATCTGAAAAAAAGCGCCAGTAGACACTGCTCTACTT TCTTGAAACAGCGTCCTCATTGAAAACCATTTTTACTGCTTTTTCCAGGC GGTCTGCCTCAAGCCCCCTTTCCAAGCCTTCATTTTTTTAGAAGCGCCGT GAAGAATATCGCGTACAACAGTCGCTGCTGCTGCTGCTGCTGCGGATGGA AGAGGTGATGAATGAAAGGGTGAAGGGTCGTCCGTCATTAGGTACTATAT ACTTGTAAAAAAATATAATTTTTTTTTGGGAAAATTCCAAAAATTGGCGG TACTTTTAGGATTTTTTACAATGGCCAAATTTTCACCAAAGTTCCCCCCC ATGAAAATGATGGAAATCCAACCAAAATACCACCAATTTTCGAGAGATTT CCCTCTGCAAGTCTCCCTCATTTTTTACTCCTGTTCTTCCCCTCACCTCA AAAGCGAGAGGTGTGCAGAGATAAAAAATATACGAAAAATTCCATTGAAT CGCTCGCAACAACGCTCCTTCTTGGTCTGCTGCTCTGCTGGAACGCTCGA CGCTGTGCACTGCTCCTACTTTTTATTGTTATTGGCAGTTGCCAGGTTGT GACAGTGAGAAGCTACATAAGTTAGTCGAGACTATAGAGGTTCAAATGAG ACAATGATGGCCTACACAAGAGAGAGAGACATCTTTCTGTCTTGTTCGTA GCACAATTACCTAATATCATATAACTAGACAGTCATAGGAGAGCTATAGG ACTTGAAATGGAACCGGCAAAGTGATGTCCTTGTTGTTCTTCTGATCTCC AGAGATATAAGGAATCAGCTCTTTCAGACATTATTTCTACAAACGGTAAA CGCCTAAAACTTCAAGATTGAAAATTTCCCAAAGAGGAATTTTTCTTTTG CCATTTTTAGAAGAAGAAGAAAAAAAAAAAAAAGAAGTGGATTTTTTTTT GCCATTTTCGGCATAAAAAATTCCTTTCGTGGCAATCGTTGTGACCGCGA CAAAAAGTGTGACCTTGCGCAACCATATTCCGGTTTAGATAATCACCAGC AACTACAATGCTCTTCCTTAAACTAGCAACGGGGTGATGGCTTACCATAC AACCAACTTTCGCATGCGCTACCCTATAGCACCTGATATTAGCCACATGT ACGTTTGAAGCAGCATATTCCGGTTTAGATAATCACCAGCAACTACAATG CTCTTCCTTAAACTAGCAACGGGGTGATGGCTTACCATACAACCAACTTT CGCATGCGCTACCCTATAGCACCTGATATTAATAGCCACATGTACGTTTG AAGCAGGATGGCGTGGTATACACAATCTACCAGCCCAGTTTGCCCAACAG TCCGAGATGATATAGCCCAGGAGGGGCAGTCTCATGAAAGCTCCCAACGT CTGTTCATGATTTATCGATTCGGGAGGACAATTATAGCTCTGGTTATTAT ATCTCTGACACTATGGAGATTCGATGAATTGTCCATTTTACCGATCGCAT ATTCCTATATCACCGGGCGGGCCCCGGGGTCCGCCCGGGACCCTTACCGG GCGGATGCAGAAGGGGGGCCAGTCAGGGAGGCTTGCCTGGCCAAGTAAAG GGTGGAATGGATGCATTGGACATACATAGTTCTTGAAATAAACAAAAAGT CATTTTTTAGTGTCTGCAAGTCCCTTAACCGTGGCGGGACCCTGCCTTTG CCCCAACCGTCACTGTCAGGCCGTTTGGTCCGGAAGTTAGGACATACTGC ACTCCATTTGGTCCAATGCACCCATTTAGTGCTTTACTTGGCCAGGCAAG CCCCCCCCTGAGTTGCCCCAGGGAGGCCTTCATACCGCCAACAGGCCCCC TTCTGTGCGGACTTACCGTGCGGGCCTTGATGTCCGCCCAGGCGGAGCCC AGATATACCGTGCGGACTACCGTTATGCGGGGGGCAGCGTTGAAGTATAG ACTATATTTGTACACCAATAAAAATTGGCAGAAATGGAGTACATAGTATA GTGGTTCATATAAAAATCCCGTAATTTTAGATATTACGGGGCACATTACT GAACATATTATGTTTATACGTTATACTAAGTAAATGTTTTGTGCTAATTC GTTGTTGAAAAACAAAACTATATATGAAAAAAAATTGATGCTTGATTGTT CTTGATCAATTCCCAATTTCAGATTTCTTTCTTCCTCTGCATCGTCATCA ACATGTCATTTGAAAAAACACCGGGTCAAATATTTACTATTTGAATATTA AATATGTATAATAATTTAATATAAAAGGTAGGGACCCGAATGACCTGGAA CGATCCGTCACTGTGTTAAAACCCGGCCTCGCTGGTGTTCACCTCTCCCT CTTCCCCGCTGGTTTTCGATTGGTGAGATGGGAGCTTGGCGCGAAAAAGA GTGAGGGAGATTCTTTTCCACTGGATACATATATGCCTGGCGAATGACCT CATCAGTCTTATCCAAGGGCGAGGTCTTATCCTTGAAAATTCACCAGAAC AGCTTTTCGGGGAAAAGCAGCGGGTTATTAAATTTTCATACAGTTCAGCT CTGCTGCTCTTCATATACTGATGTGACCCTGAAATTATTTTTGAATAATT GCAATTGCATGTGGATTTCTTTTTCGAAAGGTAAAACAACGCACGAATGC CGTTTTGAATGATTTTAGCGATTTGCAAACTTCCACCCCTTTTAATGTTT ATGGTATATTACATTATACCTTTTTTGATGCCTCATGCATTTTTTCTGTT TCAAGACTCGTAAAAATGAAGATATTTGGAAATTATGAGCTACATATGTC TAAAATCTCGTGATTTTAATCAGCTTTGATCTCCGGGTATTGAAAATTCA GTGGTCTGAGGATTTTACCAGAAAAGAAAACAAAAACTTTGACAATTTCT ATAAATTGAAACGTTTGAAATTTCGCCGCTTGATGGGGCGGAAGAACAGG AACGTATCCGCCGCCCGCCCCATCGAGCGACAAAATTTCAAAAGTTTCAA TTTGTAGAAATTGTCAAAGCTTTCCTCCAAATACTAACCCATAACCCTAA CCCCAACCCTCCGCTCCCTCCGCTGCGCGACGCGCGCGCGGCGCGGCAGG CCAGAACTTCATCTTCTTCACGGTGTCGGCCTTTGACCCGCTGGTGTGCA CCACGATCACGACCACGCGCAAGTTCTTCACTGTGCTGTTCTCGGTGAGC ACACCACACACGGGCGGGGGCTATCACTGTAAAATGTGCGTGCCTTGATG TACAATCCCCTTGTCTGTTGATGACATTGATGTGTAGTATGCTGCTATGT GATCTTCTCTGGCCAGAGAGCGTAGAGAGCGTATGCTGCCATGTGATCGT CTCTGGCCAGAGACTGTGCTGTATCAATAGGGACTGACCTGCGTGCCATG TGCGGTTCTTTTGTGCGTTGACAAACCTGACTTCTCTGAGCGTGATTTCA TTTTTCTAATTTGCACCTCTCCAATATAAATAACAGGTTTTTGCCTTCGG ACACAAGCTGACAACCAACCATTGGATCGCCGTTTCTCTGGTCTTTGCCG GCTTG
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig115:400809..410313-

>mRNA_H-akashiwo_Contig115.4.1 ID=mRNA_H-akashiwo_Contig115.4.1|Name=mRNA_H-akashiwo_Contig115.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=900bp|location=Sequence derived from alignment at H-akashiwo_Contig115:400809..410313- (Heterosigma akashiwo CCMP452)
ATGAGCTCTGGGAACATCCCTTCCGAGCTCAAGCTGATTTTTGCAGCCGG
CGGGATCTATGGTTGCTATCTGTCTTATGGCGTCATGCAAGAGAAAATTT
TCAGCTATGTTGGAGATGATGGATCAACCTTCACCCAGACGCTTTTCCTT
CTCCTGCTTCAGTGCATTGTCAACAGTCTGGCAGCCGGACTTGGAATGCT
ACTGCTTGGGCCCAGTGGAGACAAAATGCCACAGAATATGTTTGCTGCAG
TTGGGGCAACATACATTGGCGCCATGCTTACAAGCAATGAGTCTTTGAAG
CATGTCAACTACCCTACCCAAGCACTCGGAAAATCATGCAAAATGATTCC
AGTCATGCTCTTTGGGGTGCTTTTTGCTGGGAAAAAATACTCCATGAAAG
AGTACCTTTGCGTACTCCTGATCACTGCGGGGATTGCAATGTTCCAGATG
TCTGGAAAAACCAAGAGCTCTGGGAAGGAGAACAGCTATTTTGGCCTGTT
CTTACTTTTCGTTTCCCTTGCTTGTGATGGTCTAACTGGTTCAAACCAGA
GCAAGCTCAAGAAGCAGGCCAAGCCAACCGTCCACGAACTGATGTTTTTC
ACCAACATGTGGGCTGTGGTTATCTTGGCGATCGGATGCCTTGGCACTGG
CCAGCTATTCTCTGGAGTCACCTACATTTTGGCCAATCCTGGGATCTGGA
GCCCCATTGCTGTTTTCTCAGCGACCAGTGCTCTAGGCCAGAACTTCATC
TTCTTCACGGTGTCGGCCTTTGACCCGCTGGTGTGCACCACGATCACGAC
CACGCGCAAGTTCTTCACTGTGCTGTTCTCGGTTTTTGCCTTCGGACACA
AGCTGACAACCAACCATTGGATCGCCGTTTCTCTGGTCTTTGCCGGCTTG
back to top