mRNA_H-akashiwo_Contig1148.12.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1148.12.1
Unique NamemRNA_H-akashiwo_Contig1148.12.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A7S3YA89_HETAK (Thiamine diphosphokinase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA89_HETAK)

HSP 1 Score: 638 bits (1646), Expect = 5.390e-231
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1 
Query:    1 YGSTNQFLSSRSWAAVPLAKKMFSFSSSSCTEVTEHCHRFLTSHDPKCDLQMEGICNNDDEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGWGAPPPEDEGGGGEKG 930
            YGSTNQFLSSRSWAAVPLAKKMFSFSSSSCTEVTEHCHRFLTSHDPKCDLQMEGICNNDDEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGWGAPPPEDEGGGGEKG
Sbjct:   39 YGSTNQFLSSRSWAAVPLAKKMFSFSSSSCTEVTEHCHRFLTSHDPKCDLQMEGICNNDDEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGWGAPPPEDEGGGGEKG 348
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A7S2V3Z0_9STRA (Thiamine diphosphokinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z0_9STRA)

HSP 1 Score: 295 bits (755), Expect = 6.810e-96
Identity = 151/293 (51.54%), Postives = 201/293 (68.60%), Query Frame = 1 
Query:   49 PLAKKMFSFSSSSCTE-VTEHCHRFLTSHDPKCDLQMEGICNNDDE-----IFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERA--------RHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGW 885
            P  K   +FSS+S    V EHC  FLT+   +  +    + N D++     I+AL++LNT+CC  SF RLW LSTFR+CADGGANRL+D +     +R         ++VP  IKGDLDSLRP+VG FY+SLG  II D DQ CNDF K L E R+ +   +P  R+T +ALGAFGGRFDQEMAA++A +E+ +    +R++LLS++NLG LL PGRHR+ PN  +EGPTCGLLP+GG    +TT GLKW+L ++ +RFGGL+S+SN++   VVEV T DPLLWM+++ P  W
Sbjct:   21 PSVKSASNFSSNSTAPAVQEHCQGFLTARWGESVVNQPTL-NGDNQSAGKDIYALVILNTNCCGDSFERLWSLSTFRICADGGANRLYDMVVKLARKRGENPKELVRKYVPDVIKGDLDSLRPDVGSFYQSLGTRIIRDRDQSCNDFYKALSELRSMQLEQYPLSRMTVMALGAFGGRFDQEMAAINALYEWDQ--VFERLLLLSEQNLGFLLSPGRHRVVPNTLVEGPTCGLLPVGGACRGVTTRGLKWDLKDQVLRFGGLVSSSNRLAAKVVEVQTRDPLLWMSEIKPESW 310
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A6G0XFX2_9STRA (Thiamine pyrophosphokinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFX2_9STRA)

HSP 1 Score: 217 bits (552), Expect = 5.500e-66
Identity = 116/238 (48.74%), Postives = 152/238 (63.87%), Query Frame = 1 
Query:  178 DEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCL-------REARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQL 870
            D+  ALIV+N      SF  LW  +   +CADGGAN+L+D ++     R  +VP  IKGDLDS+RP+V  ++ +LG ++I D DQD ND  KCL        E +A   ++ P + L  L +GA GGRFDQEM  V+A F++      DR+ L+SD     LL PG+H + PN  +EG TCGL+PIGGP  SLTT+GLKWNL+N    FGGL+STSN +LG  V V TSDPL+W T+L
Sbjct:   32 DDPLALIVINGIGLVSSFDHLWKKAKITVCADGGANKLYDHIQKDSMTRT-YVPQYIKGDLDSIRPDVASYFETLGTQVIKDPDQDSNDLDKCLSLLQNLQEEFKATEASNTPAK-LNVLVIGAMGGRFDQEMQNVNALFQWSS--IFDRMTLVSDSTSATLLVPGKHSIRPNFTVEGRTCGLVPIGGPCKSLTTSGLKWNLTNHETFFGGLVSTSNHVLGDEVLVETSDPLVWTTEL 265
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A485LA89_9STRA (Thiamine pyrophosphokinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA89_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.360e-63
Identity = 112/232 (48.28%), Postives = 148/232 (63.79%), Query Frame = 1 
Query:  190 ALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCL---REARARRDAHFPGR--RLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQL 870
            ALIV+N      SF  LW  +   +CADGGAN+L D +      +   VP  IKGDLDS+RP+V  +++  GA++I D DQD ND  KCL   R  ++  D    G   +L  L +GA GGRFDQEM  ++A F++      +R+ L+SD     LL PG+H + PN ++EG TCGL+PIGGP  SLTT GLKWNLSN+   FGGL+STSN +LG  ++V TSDPL+W T+L
Sbjct:   37 ALIVINGIGLVSSFDTLWNKAKITVCADGGANKLFDYIHKEKVPK-NFVPQYIKGDLDSIRPDVAAYFQQHGAQVIKDPDQDSNDLDKCLSLLRNLQSDLDVDASGAPVKLNVLVVGAMGGRFDQEMQNINALFQWSS--IFERMTLVSDSTSATLLVPGKHTIRPNFSIEGRTCGLIPIGGPCESLTTDGLKWNLSNDSTSFGGLVSTSNHVLGSEIQVETSDPLVWTTEL 265
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A836CNJ4_9STRA (Thiamine diphosphokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 5.330e-60
Identity = 114/235 (48.51%), Postives = 147/235 (62.55%), Query Frame = 1 
Query:  190 ALIVLNT---DCCTQSF-RRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGR-HRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPA 879
            A+IVLN    D  +  F R  W  ++ RLCADGGAN L+DSL      R+  +P  + GDLDSLRPEV ++YR  GA I+   DQD NDF+KCL++  A   A    R  T +ALGAFGGRFDQEMAA H  +++    +  R VLL   N+  LL P R HR+ P+P +EGP CGLLPIG P  S+TT+GL W+L  +P+ FGG +S+SN+I    VEV T  P++W      A
Sbjct:   42 AIIVLNNVGEDSGSSLFLRSAWHSASLRLCADGGANSLYDSLGEQ--NRSLFLPDMVVGDLDSLRPEVADYYRDSGAAIVKVSDQDRNDFEKCLQQVLASAGA--AARDTTVVALGAFGGRFDQEMAAFHLLYQYTH--AFRRFVLLGGGNVSFLLLPDRRHRIVPDPRMEGPFCGLLPIGNPCGSVTTSGLMWDLHQQPLAFGGRVSSSNRIAAAEVEVVTDAPVVWTMSFGAA 270
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: W4HEM3_9STRA (Thiamine diphosphokinase (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HEM3_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.480e-58
Identity = 110/233 (47.21%), Postives = 142/233 (60.94%), Query Frame = 1 
Query:  190 ALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSL-RAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARA-RRDAHFPGR----RLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQL 870
            ALIV+N       F  LW  + F +CADGGAN+L+D + R        ++P  IKGDLDS+RPEV  ++   G ++I D DQ+ ND  KCL   R  +RD +  G     +L  L +GA GGRFDQEM  V+A F++       R+ L+SD     LL PG H + PN A+EG TCGL+P+GG    LTT GLKWNL+N    FGGL+STSN +L   V V TSDPL+W T+L
Sbjct:   36 ALIVINGIGLISCFDHLWEKARFTVCADGGANKLYDYIKRDKVVPPKNYIPQYIKGDLDSIRPEVASYFELQGTQVIKDPDQNSNDLDKCLSLLRTLQRDLNANGHGDAVKLNVLVVGAMGGRFDQEMQNVNALFQWSS--IFHRMTLVSDSTSATLLVPGTHCIRPNFAVEGRTCGLIPVGGSCEILTTKGLKWNLTNHSTAFGGLVSTSNHVLDCDVHVDTSDPLIWTTEL 266
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A8H7UCW3_9FUNG (Thiamine pyrophosphokinase n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UCW3_9FUNG)

HSP 1 Score: 197 bits (500), Expect = 3.200e-58
Identity = 100/231 (43.29%), Postives = 150/231 (64.94%), Query Frame = 1 
Query:  187 FALIVLNTDCCTQS-FRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARR--DAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQL 870
            +ALIVLN        F++LW  +++R CADGGANRL+D+       R +++PHA+ GDLDSLR +V ++Y S   E+  D DQ+  DF KC+   R +   D +  G +   +A  A GGRFDQ +A+++  + F +  +  + +L+SDENL +LL  G+HR+  N  LEGPTCG++P+GGP+  LTT GL+WNL++ P  FGG++STSN +   +VE+ T  P++W  +L
Sbjct:   32 YALIVLNQKLNRLDIFKKLWSEASYRFCADGGANRLYDAFVDDEELREKYLPHAVHGDLDSLRKDVRDYYESKNVEVSQDHDQNSTDFMKCISLLRKKETSDKNEDGIKYDIVAFPALGGRFDQTIASINQLY-FLKDETDRQTLLVSDENLTILLDEGKHRIECNRQLEGPTCGIMPLGGPIV-LTTRGLRWNLTDYPCHFGGMVSTSNVLASDIVEIETDKPVVWTVEL 260
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A024UQL3_9STRA (Thiamine pyrophosphokinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQL3_9STRA)

HSP 1 Score: 197 bits (501), Expect = 4.220e-58
Identity = 113/254 (44.49%), Postives = 150/254 (59.06%), Query Frame = 1 
Query:  175 DDEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERARH-VPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRD---AHFPGR--RLTALALGAFGGRFDQEMAAVHACFEFQRGGSR----------------DRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQL 870
            D    ALIV+N       F  LW  + F LCADGGAN+L+D ++      A++ VP  IKGDLDS+RPEV  +++  GA++I D DQ+ ND  KCL   +A +    ++  G   +L  L +GA GGRFDQEM  V+A F++QR   +                 R+ L+SD    +LL PG+H + PN  +EG  CGL+PIGG    LTT GLKWNL+N    FGGL+STSN +L   V V TSDPL+W T+L
Sbjct:   31 DKNPLALIVINGIGLISCFDHLWEKARFTLCADGGANKLYDYIKRDSVASAKNFVPQYIKGDLDSIRPEVASYFQLHGAQVIQDPDQESNDLDKCLTLLQALQGDLASNDQGEPIKLNVLVVGAMGGRFDQEMQNVNALFQWQRFRPQRFAKSNPLFMARSSIFHRMTLVSDSTSAVLLAPGKHCIRPNFDVEGRKCGLIPIGGSCERLTTHGLKWNLTNHSTVFGGLVSTSNHVLDHEVHVETSDPLIWTTEL 284
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A7S2NTE4_9STRA (Thiamine diphosphokinase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTE4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 8.160e-58
Identity = 111/247 (44.94%), Postives = 151/247 (61.13%), Query Frame = 1 
Query:  169 NNDDEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDSLRAAGGERAR-HVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARAR---RDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPG-RHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGWGAP 894
            N DD   +     T+ C+  F+RLW LS++R+CADGGANRL D++ AA        +P  I+GDLDSLR +V ++Y S G  +  D DQD ND  KCL+    +     +      LT    GAFGGRFDQEMA+++A + ++  G   R++L ++E   LLL  G  +R+  N  LEGPTCGL+PIG    S TTTGLKWNLSN+ + FGG++S+SN +   VV V  S PL+W T++   G G P
Sbjct:  103 NTDDHAASSASTATEDCSI-FQRLWNLSSYRVCADGGANRLLDAVTAAATTNPELFIPDLIRGDLDSLRSDVRQYYSSNGCSVEQDFDQDTNDLDKCLQALAMKYTNEQSESSSSPLTVCVFGAFGGRFDQEMASINALYRWK--GKFHRLILYTEETSALLLPEGVENRIRINKELEGPTCGLIPIGLRCESCTTTGLKWNLSNDILEFGGMVSSSNHVENEVVTVHASSPLIWTTEMKRFGDGVP 346
[Close]
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Match: A0A8J5XDA2_DIALT (Thiamine pyrophosphokinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDA2_DIALT)

HSP 1 Score: 195 bits (496), Expect = 1.430e-57
Identity = 102/219 (46.58%), Postives = 138/219 (63.01%), Query Frame = 1 
Query:  229 FRRLWGLSTFRLCADGGANRLHDSLRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCL---REARARRDAHFPG-RRLTALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLH 873
            F R W  +  R+CADG ANRLHD LR     RA  VP  IKGDLDSLR +V  FY   G  I  D D+D +D  KCL   R+ +A +    PG  R+T + LGAFGGR DQ+MA ++  F +Q  G+  +++LLS+ +   LL PG H + PN  +E   CGL+P+G P +S+ T+GL+WNL ++P+ FGG++STSN+++G  V V T   LLW T L 
Sbjct:   49 FERAWRCARVRVCADGAANRLHDGLRT-NERRAAFVPDLIKGDLDSLRTDVRAFYAERGVRIEQDTDEDHHDLDKCLMALRDEQAEQARALPGAERMTVVVLGAFGGRLDQQMANLNMLFRWQ--GAFAQLLLLSEHSAAFLLAPGEHTIEPNAEVESAVCGLVPLGAPCASVRTSGLRWNLCDQPLAFGGMVSTSNEVVGREVHVQTDGALLWTTVLR 264
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1148.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3YA89_HETAK5.390e-231100.00Thiamine diphosphokinase (Fragment) n=1 Tax=Hetero... [more]
A0A7S2V3Z0_9STRA6.810e-9651.54Thiamine diphosphokinase n=1 Tax=Fibrocapsa japoni... [more]
A0A6G0XFX2_9STRA5.500e-6648.74Thiamine pyrophosphokinase n=1 Tax=Aphanomyces eut... [more]
A0A485LA89_9STRA1.360e-6348.28Thiamine pyrophosphokinase n=1 Tax=Aphanomyces ste... [more]
A0A836CNJ4_9STRA5.330e-6048.51Thiamine diphosphokinase n=1 Tax=Tribonema minus T... [more]
W4HEM3_9STRA2.480e-5847.21Thiamine diphosphokinase (Fragment) n=2 Tax=Aphano... [more]
A0A8H7UCW3_9FUNG3.200e-5843.29Thiamine pyrophosphokinase n=1 Tax=Umbelopsis vina... [more]
A0A024UQL3_9STRA4.220e-5844.49Thiamine pyrophosphokinase n=1 Tax=Aphanomyces inv... [more]
A0A7S2NTE4_9STRA8.160e-5844.94Thiamine diphosphokinase n=1 Tax=Leptocylindrus da... [more]
A0A8J5XDA2_DIALT1.430e-5746.58Thiamine pyrophosphokinase n=1 Tax=Diacronema luth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1148contigH-akashiwo_Contig1148:359104..373524 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008862255.1
Preferred nameTPK1
PFAMsTPK_B1_binding,TPK_catalytic
Model size930
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00004,RC00017,RC00037
KEGG koko:K00784,ko:K00949,ko:K08851,ko:K13511
KEGG ReactionR00619,R09037
KEGG Pathwayko00564,ko00730,ko01100,ko03013,map00564,map00730,map01100,map03013
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004788,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016462,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0036172,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044715,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons8
Evalue6.91e-59
EggNOG OGsCOG1564@1|root,KOG3153@2759|Eukaryota
EC2.7.11.1,2.7.6.2,3.1.26.11
DescriptionBelongs to the thiamine pyrophosphokinase family
Cds size930
COG categoryH
BRITEko00000,ko00001,ko01000,ko01001,ko01004,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1148.12.1prot_H-akashiwo_Contig1148.12.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1148 359104..373524 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387098.0836086-CDS-H-akashiwo_Contig1148:359103..3593181681387098.0836086-CDS-H-akashiwo_Contig1148:359103..359318Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 359104..359318 -
1681387098.0961235-CDS-H-akashiwo_Contig1148:361842..3620081681387098.0961235-CDS-H-akashiwo_Contig1148:361842..362008Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 361843..362008 -
1681387098.1054516-CDS-H-akashiwo_Contig1148:362623..3627401681387098.1054516-CDS-H-akashiwo_Contig1148:362623..362740Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 362624..362740 -
1681387098.1148233-CDS-H-akashiwo_Contig1148:371586..3716401681387098.1148233-CDS-H-akashiwo_Contig1148:371586..371640Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 371587..371640 -
1681387098.1239069-CDS-H-akashiwo_Contig1148:372526..3726681681387098.1239069-CDS-H-akashiwo_Contig1148:372526..372668Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 372527..372668 -
1681387098.1335828-CDS-H-akashiwo_Contig1148:372975..3731151681387098.1335828-CDS-H-akashiwo_Contig1148:372975..373115Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 372976..373115 -
1681387098.1432617-CDS-H-akashiwo_Contig1148:373280..3733511681387098.1432617-CDS-H-akashiwo_Contig1148:373280..373351Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 373281..373351 -
1681387098.152714-CDS-H-akashiwo_Contig1148:373499..3735241681387098.152714-CDS-H-akashiwo_Contig1148:373499..373524Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1148 373500..373524 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1148.12.1

>prot_H-akashiwo_Contig1148.12.1 ID=prot_H-akashiwo_Contig1148.12.1|Name=mRNA_H-akashiwo_Contig1148.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=310bp
YGSTNQFLSSRSWAAVPLAKKMFSFSSSSCTEVTEHCHRFLTSHDPKCDL
QMEGICNNDDEIFALIVLNTDCCTQSFRRLWGLSTFRLCADGGANRLHDS
LRAAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQ
KCLREARARRDAHFPGRRLTALALGAFGGRFDQEMAAVHACFEFQRGGSR
DRVVLLSDENLGLLLGPGRHRLAPNPALEGPTCGLLPIGGPVSSLTTTGL
KWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGWGAPPP
EDEGGGGEKG
back to top

mRNA from alignment at H-akashiwo_Contig1148:359104..373524-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1148.12.1 ID=mRNA_H-akashiwo_Contig1148.12.1|Name=mRNA_H-akashiwo_Contig1148.12.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=14421bp|location=Sequence derived from alignment at H-akashiwo_Contig1148:359104..373524- (Heterosigma akashiwo CCMP452)
TATGGCAGCACCAACCAGTTTCTATGTAAGAGCGCGACACCACAAGTTGA
CCCAACTCCAACTATATGCTGCTGCCAATAGCGTACTCTTTTTTTTTTCC
TGCAATGAAGCACAATATTTTCAATATTTTTAAGTTTTTATGCCCCCATC
CCTCTCTATCCCCACCCCCCCAGCTTCGAGAAGTTGGGCAGCAGTCCCTC
TTGCTAAAAAGATGTTTTCATTTTCCTCGTCCTCCTGTACTGAGGTATTG
CAATGTAATACTGCTGAATCAACAACTTTTATTGTTGTACATGTATGGAT
GAATCATCCATATTTGATTTTAGCACGCTGCAGTGGGAAATCATCATCTC
AATTGACCTGACTTCTATGCAGCTCGCAGCTTCTCACACTATACAAACAA
ACTTTGCAGGTTACTGAGCACTGCCACCGGTTTCTCACATCCCACGACCC
AAAATGTGACTTACAAATGGAAGGAATATGTAACAATGATGATGAAATAT
TTGCACTGATCGTGCTGAACACAGACTGCTGTACACAATCCTTCCGAAGG
TATGTTGATTGATGAGGCACAGTCAAGCTGAGCAATCCGATCCTCCCTTG
ATGGTGTATATTACATGATGAATATGATGCTGACTTATTATTATGTTGCA
AGTATGCTAGATGCCTTCCTTGGTCTTTACTGAAGCTGACTGTTGGACTT
GGCATAATCACCAACAGCATTTTCCCCAAAGGGATGTTATGCCAACATGC
CAAGAGGTGGAGGACAGGAGGGGCACGCTAATAATAACATTCTATCATCA
TTTTTGCTGTTGTTTTTTGTTGTGTGCGGCGGCGCCCCGGCCCCCCGCCC
CGCCAGGCTGTGGGGGCTGAGCACCTTCCGGCTGTGCGCGGACGGCGGGG
CCAACCGGCTGCACGACTCCCTGCGGGCCGCCGGGGGGGAGCGGGCGCGG
CACGTGCCGCACGCGATCAAGGGCGACCTGGACTCGCTGCGGCCCGAGGT
GGGGGGGGGGGGGCACGCCTCCTCCTCCTCTTCGCCCCCAAGATCCCCTC
TGCGCTTCTTCCTCCTCTCCTTGGTGGGGAAGAGGCGGAGGTGCGCAGGG
CCGAGGGTATGGTGTTTGTGGTCGCGCGGGAGGTGTTTGTGGGTCTGGGG
TATGCAGGTCGGTATGCCTGCGGCGGGGGGCAGATCCATGAAGGATGGAA
GAAAAAGTGTATGGATGGGGAGGGGGGGGCTGAAAAAAGAATGATGTATT
CGATCCCACAGGGGGAGCGCTGTGTTCAGTGTGGGATGCATTATATACAA
GATGACCGTGGGTTTACAAAAACTCACTCTCGCTTCAGGCCAGGCCTTCG
TTCCGATCCACGCTGTGTATCCCAAACCGCCCCCTCCTGGTATACCCTGC
AGAAAGCCAACAAAAAGTTTCTCCATCCCTCCCACCCCACCATACACACT
TTTGGCCCTCAGACACCGCCGAGCTGATTGTGCTCGTATTTTACTTGTTG
CTATATATATATAATATATTCATAGAGGAACTGCTTCAATGAGGTTGCCA
AAATTTGGTTATACTTGTACAATTGCAGGGTGAAGTGTGTACAGCCGTGT
ATGTAGCAGGGGGTGGCATTGATGTTGTTGTATATGAATATGCTATGTAC
GTAGTAGTATCTAAAAAATAATTTCAAAAATAATATTATTGCAGGGTGTT
GGGTTTAGACAGAAAAACCGCCTCCATTATCAGTGAGAAAAGCTCCATAT
ATTACCAAGAAGAGAAGGGAATATGTCAAAGGTTTTTTAATCATTATAAC
TCCATGACAACTATGCTGCATTTCGGCTTACTGAAAAAATAATGATAAAT
AAAAAATAAATAACGTGTGGATGTGGAAAAATAGGTGGGAGAATTCTACC
GATCTTTGGGGGCTGAGATCATTCACGATGGGGACCAGGTGCAACAGCAT
ACTCACTCCAATGCCCTGTGTATTATTCTCATAATCTATGTATATGTATG
ATGTATAGCAAAAATGCCATTCGATTGAAAAATAGACACGGCATTAAAAA
AAGGCGTTGAAAAAAAAACACACACACACACACCAACAACAACCACCACA
ATAACAATAGCATCACACGAACAGTTCATAAAATAATATATCATAATACA
ATATGATGATGATGATAATGATGATGATGATGATTTTGATTTATTTATTT
ATTTTAAAAAGTCCAGCTGCTTGCTCGGATAACTACAACAAGGACCGAAG
CCCCGGCCTCCACAAGCAGACCCTGCCACATCTAGGTCCCACTTCTCATA
TGGATTTCCGAAGTACAAGGGCCGCCTGAGGGGGAGGCCGTGAGGGCAAA
GCAGCACCGGCTGCCAAGCAAAAGTAATCAGCCTAGTGCATAGGCCTAGT
ACCATTTTGGAGGGGGAAAGCTAGTATAGTTTACTTACCCATGGTGGTAA
CAAAGTATATGTGGAGACAAGGTATATGTGATTAATGATGATTGGTTGGC
ACATGTTTTAAGTTGTGAGTAGTATTGTTATCGTGATCTGATTGGTAAGT
TTACGTTGAAAAGGTTCACGATACGGGTGGCAAGTGAAGTTGCTAGATGC
GCGCAAGCCATATGTAGCTGCAGAAGTTTCCTTGTTGTTGCTGTTGGTTG
TGCGTTGTTGTTGTTGTTGTAATATGTATATTGCTGGCGGGTACACTACT
ACTGCCAGCAACTGACCTTGTCATAAAATCTAAATCAAACCTCCTTGTCA
CAGGCGGCTGCCAGTGTACACTGCAATGCGGTACAAACCATGGACATTGC
TGGTGGGAGTCCTTTGTTCGTACTGGCTGCGGAGAAAAAGGGGGTGCGGT
TAGAGTGAGAAAGTGTGATCGGAATAGATAAAAGACAAAAGAAAAAAAGA
AAAACGAACAACGCAACTAGGTTGGGGACGCCCGCTGGGTAAAGACCTGA
AGATTCCCCCTTATCTTTCAGTGGTGGGCTAACCGTCGATTACCTTTTGG
TGGTGGGCTATCCGATGGACGGTGGAGATGACGACATGGATTACACCTTT
CGGTGTGGTGGGCTAACCGATGGATGAAATGAAGATGAACATGAGTGATT
TGTGGCAATTTGATTCCTGGGGATTTTTTTTCCGGCGAGCATTGCTAAGG
ACAAGTTTGATTGAAACAAGATGATGATGAAGAGCCACTCAGTAATGAAA
TTCAGCCCAGTAGTATACACCAAGAAAGGCTAATGATTTGCAAGCCGGGT
GGTAGCAGCAGCAGTATGAAATGAGATGATGATACCCTTTATGGTTACAG
CTTATAGGGGGAGTGTCAAGTGGCCACGGCTAGGCCCACGACAACAGTTT
GATGATATGATGGTATATAATCTTTCTTCCTGCCCCACTGGAGCACCATG
AGTAAGATGAGCCTAAGAAGTAGTGTCCTCGCAATGTCCTCCTTTGTTTA
CGGGTATTTTCCGCTCATGCGTGGATTTTTGAAGGCGTACGTTGAGCAGG
TGCTAGGTTTTATGACCTCTGTTCATGTTTGTTTTTTGTTCTTCATCGAC
AAGCGTCAGAGCCTGCAGCACGAGAACAAGAAGAAGAACAAAAAACATGT
CTTACTTTGCCCTTCTTCGACTTCTGTCTTGTTTCTTGCACCTCACCATC
TCAGTGAAGCAGGTAAAGGAGGATTTTTTAATGGTTAGCTACAAAGAACT
ACTACTCTTGACTCCTACCCTACATGCAAAAGACTCTGAGTTTCGGCCAA
TACCAGGCCACCAACGGTAGAGACCGTCGGGTTTTCATCAGTTCTGCTGG
TAGGTGGAAGTGAAGTGACGGAGCCCTGATAACAGACTTCTCAGTCTCAG
TGTACATGTGATGTTGTTGGAGCTGCTCAGTACTGTGATGATAGCCTTTG
CTTCTGCTCCTTCCATGTTGTGAGAAAAAGTGTAACTGCTGCTGTTGATT
TTTGGCAAATCAAAATGTGATTTTTTCAACAACGCCCCAGAATGGTTGTT
TCTTCAACTTTCCATCTTTTTTCCTAACCCAACTGCTTTCGAAATGTACA
TATGAGAATGTGTGCGCAAATCCACTCCCCAACATTCAGCTCGCCATTTA
ACCCAATTGTGTCCCGGGGCCGGGCAGACCCAAGTCCGGCAGTGTAAGTA
AATCCACCGGCATATAAGGGCAGTCAGCTCTGGATAGTTCTGACCAGTCA
CCATCGTGTCCCCGGATGAGTATGTTTTCCTCCTCCCCCGCATACTGCGC
AGGTTGAGAAGTCATCGTCTTGAAAGACGACACTGGATCGCCGTGCTAGG
CTTGTTTCTATAATCATAATGATCGTCATGAGTTGGCGTTCTCGTTGATA
TTTTCGCAAAGCCTCTCATACGGCTCTGAAGCACTGCGCTGTTTTGATGG
TTGCTACTAGGGTCGTTAGAAAATTCACAGAAATAGAAATTTCTTAGAAC
TCTTATATATACATATATAATATATTTATTAAGTGGCTTGTAGTAGCCGA
AATGCAGCATAGTTGTCATGGACTTAATGATTAAAAACCTTTGACATATT
GCCTTCTTGGCAGTGTGGAACTATACTCACTGATGTTGAAAGCGGTTCTC
TGTTTAGACCCAACACCCTGCAATATTTATTAAGAATAATTAATAAAGTA
GAAAAAAAAAAAATTGAAGACAGAAAAAAAGAACAATAAAAAGAAGGAGA
AAAGAAAAAAAAAGAAAGTCTTGGAAAAAAAAGAAAGATGAAGGAAAAAA
AAAGACAAAATAATTCTTGGAGAAGAAAAAAAAAAAATGAGAAAAAAAAC
ACATAATAAGGAGGAAGGAGCAAAAAAAAAACACCCCTAAAGGAATATTA
AATGCAGAACCCTAGGCCGCCCTTGTCAGAGCCTCCATCCCCACCAAAAA
AAAAAACATCAATAAAAATGAAAAAAATGCCAAACTCACAGTGCCGTTGC
TTTCGCCCTGAAAGCCAGCATGTGCTCCCTTGCTCTCTTCTGCGCTGGTC
GTGCCCATCTTTCTCCGCAAAGTAGACCCACCCGCCCGATTTGGCAGCCA
TACCAGCACCACGACCGCTCCGCCCGCCACCTCCTGCATCGTGTCCCAAT
GTAGGTACCGCCGCCACCTGCGCCATACCACAAAGGTGGCCGCCGCCCCG
GCGGCCGCCGTAGCGGCCGGCGCCCCCATGCTTCGCGCAACACACCAGAA
CAACCCAGCTCATTTGCTCATCCTTCACCATCCCAGACACCAGGCCTTTG
TAGACTTGGTTTGTGTTCAAGCTGCTAAGAGATTGGCCAAGGGCGGCACA
CCCAAACTATTAGCAGGCGTCGAGAAGGACAGAGTGGTAGTCTTGGTGCG
TGGGTGTCCAAAGATAACAGAGCTCAAAGCAGCAGAGGGCATGTCAGCAG
TGTAGCTCCCAACAGCAGTGTTACTGGAGGTAACACCTACAGCAACATGT
GCGCACAACATGGCACGGCTCAAAGCAGTGTTTTGTTGTGGCGGATGATT
GTTGCAGCACCAAAGCCTCTTGCTACGAAACAGATGGCTAGGCCAAAGAA
AAGAGAGTTCGCAGTAGAGGTCAGCGTCAAAGAGCTGTTGACTCAGAGAG
CCGAGCAAACTATAGCCAGACGAGTATACCGCATGATCGTTAGTCGAGGA
AAAGCTTGGACAGAGAGCAATACCCAGTGCAAGAACAGATCCAAAGAAGC
CGTAGCAGTCAAGTATCAGGACACTGGGGCCTGAAATGCAGGGCCAACGT
ACTGGTCACGCAAGTACAGCGTAGTCATGACTCGAGGCAAGGTCTGTCGC
ATCAGAAAGCATGGCCAAAATACTCTCACACACAAGTGCAGCGTATTCGA
AACTCGGAGGCAAGGCCATCAGGGCAGCTGAAAGTGCACGGCAGCTAAGG
GGCCAGCCCTCACAGAGAGTTTAGAGGTTGAAACAGTCCCAGTACCTTGC
CATTGTTCGATGGGTTGAATTTTGTTTGAGATGGATATGGAAATGAATGT
GAGTCGTCTTGCTGCTGCTGGCTGCTGGTGGATCTTAAATCAAGAATCAA
AACTGCGCATTGCACTAGAAGACGAATAAGATTCAAAAACATGTTTTCCA
TTTAAAGGGCTTTTCTAAATGGATACAATAATATAACAAGACCGTATATG
ATAATTTTTGGTGATAAACTTCCACCGAGCACATTGCCAGAATCTAATAA
CACTGTCTTGATAATATTTAATTTTAAATATTTTCACGAAAAACAATAAA
TATTTTTCAAAGCTTTGTGATAATGGATGTTCTTATAGTTTTTTTTTCTC
CTTTTTTTTATTGTTATTAGGCTGGCCCTCCAATTTATTTATCTTTTACA
CGTTTTAAACGAAGTTTAGGTATAAAAGTTCGTATGATTTAAAAGTCTCG
GTTATCATCAAATTTGAAAGTCTCGGTATATAACTAGAAACTTCCCTTTT
CACCTTCACACTTCTTGCCGACGCTATTTTCTTTTTGCTTGAGAAGCGCA
GTCCAAAAGCAAAACGAAAATAAACAGGAACATTTCGTGACATGCAGTTT
AACGTACGGACAGGGAGGAACAGAGGCAGAACTGTCTCAGCAATGGACAT
TTTCGAAGTTCTTAATTCTCTTTGGCGATTTTTAAAAAGTTGATGAAGTT
TTAGTGATTTTCAAACTACCATTATATTGGTTTAATATCTAAAAAAAATA
GTTTTACATTACTTTTCAACAACTTTGCATCTTTGGTATCTCTTTCTTAA
CAAAACACTTAACAAAATATATGGTCTAAAAGTTTTTAAGATATGTGAAA
AGCAAAAATTTATAAAAGGGGTTTGGAAAACCCTTCACGTATCTTGAACT
ATTGTTTCATATCAGAATTTGACAGCTGCTTGAGCTTGGTTGGATTCTAA
TTCCTCCCGGTCACAACCAATATCTCTACTCCCACTCCTCCCTACAAGCG
CGAGCTGCGTGCTTTAACCCAATCGGATTTTTGTTCTATAGCAATGTGCT
TTAACGGAATATTCCAAATTTTCAGTCCGTGACGTATTGAAGATTATCCA
AAATTCTTATTTTAAACTTTTTGATTTTTTCTTTTGAATGAAATGTTTTG
GACCCCATTTTCCTTTCTTTCTAATGAAAATCTTCTCAAAAATGAAAAAG
ATGAGACAGAGTTGTGGGGGAGAAATGTGGTAAATATTGGTGTGAATTTA
TCGGGAATTAAACTTTAAATATAAAAATGAAATCAAAATAATGGCGTTTA
AAAAACCATTTTTTAAATATTTCCGAATTACATAAAAGTTCGTGGGAGCT
TTGGTCAGCTTTAGTTGTGTGTTTGGGCGGAGTGACTATGTGTTATGTAT
GACGTTCATCATAACTTTTGATCGGTCCTTTCAACATGCTGAGCGACTAA
TTAATATTCAAATTTCAAAAATATCTATTGAATGATTATTCTTGATTGCA
AATTATATGAAAAGAGGGAGAAAAAAATGGAGTGAACGGGGAAACCTTGA
AACTTTTTTTTTTTTTTTTTTTTTCATTCTCATAAGAATCTCACCATTTA
TTTCGTTGATTCACTTGATATTGTGAAAATTTAAAAAATATGAAATTTTA
GAATGTTTAAGAATCTTGAAAACAAGGTTTATAGTTTTCGAAGAACTTTA
GCTTCCGCAGCTGCTGGTGTTGCTAACTTTCGGAATAATTCTTTAGATCA
TAATTTAGCTGGATACATTGACTCATGCCTCTTTTGATAATCCATCGGGA
TTTTCAAGTTTTCATGTAAAATATTGGTATTAGTTTACATGCACATATAA
CTACAAAAATCATAAAATGCAAGCGAAATTATAATTTATGTCGAATCTTC
TGACATCAAAATTTTTAAAAGACAAAAAAAAAACGTTTTTGAAGCCAGTA
TTATTTTAAAAAATCCAAAACTAAAATCCATATAAAATAATTATATAAAG
AGCTACGCGGCGCAAATCTAATTCTTCCAAATCTTTTTTGTTTTTTTTCG
AACTGACCCGATCCCTGGAAGTAACAACACAACAACAAAATAATATTCAC
AACAATAATAATAATACAAATAAAGCAGGAGTCATTAACCACAAATGAAG
AAAATATAGTATACCACACTACCTGTCATCACAAACCATAGGAGAAAACC
CTCTCTGCCTTATCACTGAACCCCTTGCGTTGAAACCTCATCCTAGTAGA
CCCCCTGCTATAAGCCTCAAGCCCAACGACGGGATCAGTGCAAAATGCAA
TCTGTAGTATTTAATCTAGACCCAAGGACTTCCCCCATTTACCATCCAGC
GGAGCTGTTGTACCACCGCTGATAGATGATGGATGATCTTGTGCCGCAAT
TTGAACTTTGAACTATAAAAGCTCAGCGTAGGGACCTCGAAACACACGTA
CAGCAAACACGGCTGCGGCTACACGTAGGCTGCAGGCTGCAGGCTGCAGG
GTCCCGAGGTCTTCCCGCATCAGTACTGGCGGGCTTTGGACCTGAGGCTT
GGGCGGCGGTCCAGGATGAGGTTGGATTTTGCGGGGTCATCAGTGATAAG
TGATGTCACGTATAGTTTACCATACTATTATTATTATATGTAAATAATAA
TATGAAAGAACGACCATCCAACCACGAAGACATCTCTACTCCCTCACCCA
AAACCCAAGCAGTAAACACACACAGTAGTACACGCATACAGTTCCCTTAA
TAGTTCAAACCCCTAATACACCAGACCCATACCAGCCCCGTCCATCATAC
CGAAACGATGAAACGCCTTCCCTACCAATTTGAACTTGCAACGAGAGGAG
CTCTTGTGAGTGCAGGGACCTCCAAACGCACGCGTACAGCACACAGCACA
CCGGGCTGCTGCGGCTACACGCAGTGAGACCAGCAGGCGCTGGCTGCCGG
CTGCAGGCCACAGGCTGTAGGGTCCCGAGGTTGCCGGAAACAACATTGCT
CTTCCCGCATCCCGCATCATACTGTTGGGCGGTGGACCGGAGGCTGAGGG
GGTCAAGGATAAAGGATGAGGTTGGATTTGGCGGGGTCAGTGATGAAGTG
AGGAGTGAGGTTAGTTCTCTCCGGTGCTGATGTTGTGCCGCTGATCCACA
TTGAACCAAAAACCTCTTATTTTTTGGTGCTGCTGATGTTGCACCACGGC
AGATGAAAATGATTTGGAGAAGGAGGAGCAGAGCTGCTACAAAACCTTCT
CATCTGCAACAACCAACACTGTATCCTCATCATGTTCGTCGTCATCATCG
TGGTCGTGGGGTTGTCTGTTAGATTCAATCTTGGGTGTGTGGAAAATGAA
AAAACGATCTTGAGTAAAAAAAAAGAGAAAAGACAAATTGGGCGCTATGC
ATTTCGAAATTTTTTCTATTTCGGTGATTTTCCTATTGTCATTAGTTCTC
ACCGTTTTGATGTTCATCGCCGTCACTTCCAGTGCAGAGCTCAATAATTC
TAATTCTGATCATCTCACTGGTGGCAATGACTGCAGCGCCACGATGGATA
TATATGAACGAAGTCAAAGAAGCACTCCTCCAGCGCTGATAAATGTTGCA
TGAACCGACCAACTGAAGGTCTTATCAGTTCATTGGCGGGCGTAAACCTC
TAAGCCTGTGCCATCACGAAAGCATACGAAGTCAAAGAACCACTCTGGAC
TTTTTTTCTTTGAGCTTCCATTCAGAACATTTCAGAAACTTGGATGTTAC
TTGTTGGGATGTACCACTTTGACCTACATTTGGTCTTGGTCTTAGTATGG
TTTGATGGTATTGGGGTGTACAGCAACCTGCACTTTCATAGTATTAATAT
CATGAAGCATTTCTGTGTATCACCTGTATGTTTTTTTTTTGCACGATTTG
AATGAATGAACTTTATATGACAAAAGACATGACTCAAAAACAACAATGCT
GTTTTTACAGCTCTATAACTAACAAAAATACCAACAAAGAAAATACGACA
ACATATCTGACAAATGAACACATCTCGCTTGTCCTGACACCCACACGGCC
TCCAAGAAGCTTCTCGTGTTAATGGTGAAGGGATGAATGAGTTTATACAA
CATAATAACACTTCAACACAAAATACCAAATAAACAAAAACGACAACACA
TCTGACAAATGAACACATCTTGTTTGTTCCAACACCCACACGGCCTCCAA
GGAGCCTCTCGTGTTAATGGTGAAGGGACGAATGAGTTCATTCAAAATGA
TAGATAACACTTCAACACAATACAACTATGAATGAACACATCTTGTTTGT
TCCAACACCCACACGGCCTCCAAGGAGCCTCTCGTGTTAATGGTGAAGGG
ACGAATGAGTTCATACAAAATGATAGATAACACTTCAACACAATACAACT
ATGCAACAGCTTGTTTACTTACTACAGCTGTAGCCATACAAACAACCCAC
ATTGTTGTGGTGATAAAAATGCCATGTTGTAGTGATGATTAATAATAGTA
TGTCTGTAAGTGGTAAAAGCCTGTTCACAAACTTGAAAGGGAGAGAAACA
CTTAAACGGAAAAGTCATAAAAAATCTATATTATTATTCCATGAAAAAGT
TTACAGAGAGAGAAACGCAGAAATGTAAGAGTTCTATATAAATGCAAGAT
ACTTTGTTATCTCTTTGCAATTTGCATGTCATATTTCGAGGTTTCAACAC
GTCAGAATCTAGTTTTACAAAAGGAAGAAGACGGCTACGCTGATACGTCT
TTTTGCATTGATTTCACGAAGAAATGAAATAAACCGAAGAAGATCATTTT
TCAAAACCAGCGTCATCTCCAACCCTCGAAACAGGACTGCAACGACTTCC
AGAAATGCCTGCGGGAGGCGCGGGCCCGGCGGGACGCGCACTTCCCTGGG
CGCCGGCTGACGGCCCTCGCCCTTGGGGCCTTTGGGGGCCGCTTCGACCA
GGCGGGGCCGGGGTCCCCGTGGGGCAACAACGTGGCGCGTCGAAGAAAGA
GGGGGGTGGGGGCGCCTTGCGCGGTGGTGTGGGCGCCCCCCCCCTCTCCC
ACCTGCTCCTCTTGCCGGTGCTGTGCTTGTTCGCTGGTGGGGGGGGGGGG
CTCGCTGGGACTGCCGAGCCCCTTTCCGTGGGAGCTCTTACCCACCGAGC
GGGCTGGGCTCAGGTGGTCACTGCACTGGTGCGAGCTCCGGCGCCTATCG
TTCCGAGGCGGTGCGCCGATGGTTGTTGTGACCCAACCGGCAGTCCAACC
CACACCACCGAGTCTGTTACTAGCTGGTGGGTCATGGCCCACCAGGTAAA
ACAAAAGGACGGAGGGGTCTGACTGTGGAAACTTAAGGTTGGGCGGTTCC
AGCTGGTTTACCACCTCGAAAGCGCTAGATACAATTGGCGATATACAAAA
TGGCAAGATTACTTCACTGATAATAATAATATCTAGTGTGGTATCTTCAT
CAAGATCCTTCACCACCACCGCCGCGGCCGCGTCTCCTCTCCTCCGGCAA
GCGCCGGCCCCGTTTCAAAACCACGAAGAAGAAGAAAAACGCCACCCCCC
CCCGCCGCCCGCGCAGGAGATGGCGGCGGTGCACGCCTGCTTCGAGTTCC
AGCGCGGGGGGTCCCGCGACCGGGTGGTGCTCCTCTCGGACGAGAACCTG
GGCCTGCTGCTGGGGCCCGGCCGGCACCGGCTGGCGCCCAACCCCGCGCT
GGAGGGCCCCACCTGCGGCCTGCTGCCCATCGGTGGCCGGGGGGGCCAAC
GGGCCCTCGGCCTTTTCCCCCCCTCTATGTTTCCCAGCATTTAGGTTGAC
AAAAATTGCATATGTATTATTATCACCGTTCCTACCGCTACTCATTATTA
TTGTTCATTTTGTATATTAGCTGTCTTCTAAGAGGAAGGGGTCCTTGTAT
GCGCTGCTGTTGGAGCAGAGTGGGCTGGCCTTCTTCAGGGAGTGCTGAAC
CCGTGGGAGCTCTCGGAAGAGTTGCTTGACAGCACGTGGGTAGACTGAAA
GAGCCAGTTGGGGCTTTGAGCTGCTTCTTCGCACCGCCCCAGCCGGTAGG
GGTGTTTGCTGGGGGGCTGTCATTTCTGTAGTGGGTTGAGTATATTGGGG
GGAGAAAGCACGGTGATGAGGGGGGAGGAGACTGGCAAATGGAAAGGTGT
GCAGTTGGAATCAATGCAGGCTATAGTAGCATTTTAAGTTTTGGTGACGA
AACAGTAACTCAGAAGTGGGATTTAAAAGTGTAAGGGTTCGCGTATGGAG
GCTGGGGCTTTGGTCCTTGTAGTTATCCAAAAGGCTGGACCTTGAATAAA
TTACAATCATCATCATCATCATGCTCGGGATTTTAGCTCTAGATAGCATC
TTTTGAAAATTGCCATCATAGAGTCGGGCGGAAGATTATATTGCGTTCTC
ATTGGAAGAAGACTGTTTATCATATTTCCTAGAGAGCATGTTTTTTTTTT
CTTCCTCGATTCTTCATCACTCCTTCATCACTACTTGTACGACCAACTTT
CAGTGAAAAACAATCAAATGCTGTCACAGTCACAAGAATTAGCAGCGTGT
CGCTGGCTTGCAAGCAGACTAAACCACACAGCCCAAAAAACTATCAGCCC
ACCACAATTGTAGGAAAGTGAAAGGAAGGGGGTTCCAGAAGTATTTGTGG
CAGAAGGAGTGGGGTTCCAGAACTATTTGTGACAGATTTTGCCAGCAGTT
TGCCATCATAATAGAAGAGCGCGATGAGTGAATGCTGATCGGTCACATGT
TGTAAGGCAATTGAGCTCAATCGTGTAGGACATAACTGTTGTTGTTGGAA
ATATTGTTGATGGAAAGACACTTCTAGTGTTTTTGCATGAGTGTCATGTC
TCGTAATGTCTTGCTTCTAGCAGTGAAGGAGGAGGACTGCTTGTTTATGA
GTTGTTATTTCTTAGAGTGCTGATGATATTTTTGACTGCTTGTGTTGAAG
TCTTCTTTTTTATGTGCTGCTGCTCCTTCCCATCTATATTCTGGTTGCTA
TAATTGTACTGATGTTGGGGTTCCTCCCGTAAATTGTCTGCAACAGACCT
TTTAAATATTAAAATCACAGATTATCATAGTTTCATGATGCTGCATTTCA
TGCGCTATATAGCAGTATTTTTGGCCCTCGCCTTTTTAAGTTTTTGATGT
TGGTCCGTCAAACATTATACTGGGCTAACATATGTTGCCTATAGTCTTAT
ATATGGAGGCCGGGACCTCGGTCCTTGTAGTCATCCAACAGGCGGACCTT
GAATAAACTAAAATCATCATCATCATCATATATATCAGATAATATATTAT
GCCTGTAAAGAGTAGAAACGGCTTGGTCAAATTGCTTTGATGCAGTGCTT
ATACAGGCTGCAAATGGATTTTGAAGGGCCTGCGTATAATGGTGAATTAA
GAATTTGGTATTTGAGCGTTTCCAATGTACTTGTTGGCAGTACAAACAAT
TATCAGAAACATCATTTGTTTGATTGGCAAGACTTGAAACTACAACTAAC
ATCATCATCATCATCATCTCCATTTATAAACTCCCGACTGGTTCCCTCTG
GAACCGAGGTACTCAAAAGATTTTGTATGTATGTATGTATGGATGCTCCT
CGGAGGAGCAAGTATTTTTCTCCTCCTCCTCCCTGATTTTTATTTTTTTC
GTTCATAATTGTTGCTTCCTAAAAAACAGATGTGTAACCCCGAAAGTTAA
AGCAGCTACTTTAGCATATAATAATATAGAGTGGCAGTGCACGGCCAAAA
AATAATAATTTCCCGTTTGTGCCGGCACGAACAAGACTTCATAGTTTTGA
TTTGTAGTCCTTAGGTTTTTTAACGAAACTTTAGCTTCTTTTTCAAAAAC
AATATTTGCTTTGTCACAAAAATAAAAGAAGACATGCCGCTGGCGAGAAG
ATACTGTACCAACTGGTTCCCTCTGGGACCGAGGTGCTAATCGAATTAAT
TCGTACACACACGTAGAGATTTTTTTTCAAGCAATCAATTTCAAAACTGT
TCGTGTCTCATTCCAAGAAACTTATTTGTCCCGGAAGCAGGACTAAGACA
ATCTCCCCGATGAGACATAGATAACGAAGAAGAGAAGGCGCTTGGTACGA
ACCCCGGGGCAGACGGTAATCTCCACAAAAAGGCTTTCCACCCAAGATAC
TGTTCACGCCAGTCGGTTCTCTACCCCCTGAAATATGTTATTTCTAGATA
CAATGTGCACAACACTCCTCTTCTATGCTCTTTCTCCATCACGGCGCTGC
CTTCAGGAGGGCCGGTGAGCTCGCTGACGACCACAGGCCTCAAGTGGAAC
CTCAGCAACGAGCCCGTGCGCTTCGGCGGCCTCATCAGCACCTCCAACAA
GATCCTGGGGCCCGTGGTCGAGGTGACCACCTCGGACCCGCTGCTCTGGA
TGACCCAGCTGCACCCTGCTGGGTGGGGGGCACCACCCCCTGAGGATGAG
GGAGGAGGAGGAGAGAAAGGG
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1148:359104..373524-

>mRNA_H-akashiwo_Contig1148.12.1 ID=mRNA_H-akashiwo_Contig1148.12.1|Name=mRNA_H-akashiwo_Contig1148.12.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=930bp|location=Sequence derived from alignment at H-akashiwo_Contig1148:359104..373524- (Heterosigma akashiwo CCMP452)
TATGGCAGCACCAACCAGTTTCTATCTTCGAGAAGTTGGGCAGCAGTCCC
TCTTGCTAAAAAGATGTTTTCATTTTCCTCGTCCTCCTGTACTGAGGTTA
CTGAGCACTGCCACCGGTTTCTCACATCCCACGACCCAAAATGTGACTTA
CAAATGGAAGGAATATGTAACAATGATGATGAAATATTTGCACTGATCGT
GCTGAACACAGACTGCTGTACACAATCCTTCCGAAGGCTGTGGGGGCTGA
GCACCTTCCGGCTGTGCGCGGACGGCGGGGCCAACCGGCTGCACGACTCC
CTGCGGGCCGCCGGGGGGGAGCGGGCGCGGCACGTGCCGCACGCGATCAA
GGGCGACCTGGACTCGCTGCGGCCCGAGGTGGGAGAATTCTACCGATCTT
TGGGGGCTGAGATCATTCACGATGGGGACCAGGACTGCAACGACTTCCAG
AAATGCCTGCGGGAGGCGCGGGCCCGGCGGGACGCGCACTTCCCTGGGCG
CCGGCTGACGGCCCTCGCCCTTGGGGCCTTTGGGGGCCGCTTCGACCAGG
AGATGGCGGCGGTGCACGCCTGCTTCGAGTTCCAGCGCGGGGGGTCCCGC
GACCGGGTGGTGCTCCTCTCGGACGAGAACCTGGGCCTGCTGCTGGGGCC
CGGCCGGCACCGGCTGGCGCCCAACCCCGCGCTGGAGGGCCCCACCTGCG
GCCTGCTGCCCATCGGAGGGCCGGTGAGCTCGCTGACGACCACAGGCCTC
AAGTGGAACCTCAGCAACGAGCCCGTGCGCTTCGGCGGCCTCATCAGCAC
CTCCAACAAGATCCTGGGGCCCGTGGTCGAGGTGACCACCTCGGACCCGC
TGCTCTGGATGACCCAGCTGCACCCTGCTGGGTGGGGGGCACCACCCCCT
GAGGATGAGGGAGGAGGAGGAGAGAAAGGG
back to top