mRNA_H-akashiwo_Contig1146.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A6V7Q0G3_ANACO (Integrase catalytic domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q0G3_ANACO) HSP 1 Score: 157 bits (396), Expect = 6.630e-42 Identity = 89/258 (34.50%), Postives = 130/258 (50.39%), Query Frame = 1
Query: 16 LWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
+WH R+GH S L VM S ++VNG+ + + CE C KA R PF K K +DL+ +DL GP S S +G+RY+L+ ++ ++ Y W+Y +K KS+ + + E + + RTD GGEF ++E SF +GI E A TP+ N ERK L + L A L K W A YV NR+P F + +EL+W +KP+V H + FG Y + R K++PK+
Sbjct: 9 IWHARLGHLSMDKLKVMVSKNLVNGLPNLATFGSSELCEGCQYGKAHRLPFDKSVTKSKAP-----LDLVHSDLMGPTSTPSYSGSRYMLLFVDDFTRYTWVYFVKEKSEVFSKFIEFKETVEGVVNRKIKCLRTDNGGEFTSNEFFSFCRQQGIKRELSCAYTPQQNGVAERKIRHLVETCKSWLHAKNLPKALWAEGMACAAYVINRVPLCPT-NFKSPYELMWGEKPNVKHFKVFGSTCYVHVPGNLRGKLDPKA 260
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: UPI0016589FE9 (uncharacterized protein LOC118514016 isoform X1 n=1 Tax=Anopheles stephensi TaxID=30069 RepID=UPI0016589FE9) HSP 1 Score: 161 bits (408), Expect = 2.210e-41 Identity = 92/263 (34.98%), Postives = 143/263 (54.37%), Query Frame = 1
Query: 4 NTKFLWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLP-AHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
N + WH R+GH + M Y +V+G+ + CE C+ K RSPF P V K +V +D+I +D+ GP ++ G RY + LI+ +S Y ++Y LK KS+ + +L+ NQ G P R+D+GGE+++ L+ F +++GI E A +P+ N ERK L M L + + K +W + A Y+ NRLP A D+ T FE+ + KKPD++++R FGCVGY + S RKK++ K+
Sbjct: 404 NCQHTWHRRLGHRDPAVIGEMKRYDLVSGLKVVDCGIRWT-CECCIECKMARSPF--PPVAEKTSTEV--LDIIHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFVYFLKKKSEVENKIREYVKLVQNQFGRKPRIIRSDQGGEYFSKALRKFCADEGIKMEFTAAYSPQQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVDR---TPFEIWFGKKPDLTNLRLFGCVGYVLIPSVKRKKLDVKA 658
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 155 bits (392), Expect = 2.980e-39 Identity = 86/258 (33.33%), Postives = 131/258 (50.78%), Query Frame = 1
Query: 13 FLWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPK 786
+LWHLR GH L +++ S+V G+ P + N+L CE C+ K R F + + R L++++ D+ GPF + S+ GNRY L I+ +S CWIY LK KS+A + + Q G Y R+DRGGE+ + + F GII + TP+ N ERK + MA + + L + +W + AVY+ NR P K ++T E +KP V H + FGC+ Y + RKK++ +
Sbjct: 329 WLWHLRYGHLGFSGLKLLSKTSMVKGL-PEINPPNQL-CEACIKGKQHRQSFKVG----RSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPT-KSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDR 579
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A6V7PE18_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PE18_ANACO) HSP 1 Score: 155 bits (391), Expect = 4.410e-39 Identity = 88/258 (34.11%), Postives = 129/258 (50.00%), Query Frame = 1
Query: 16 LWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
+WH R+GH S L VM S ++VNG+ + + CE C KA R PF K K +DL+ +DL GP S S +G+RY+L+ ++ ++ Y W+Y +K KS+ + + E + + RTD GGEF ++E SF +GI E A TP+ N ERK L + L A L K W A YV N +P F + +EL+W +KP+V H + FG Y + R K++PK+
Sbjct: 372 IWHARLGHLSMDKLKVMVSKNLVNGLPNLATFGSSELCEGCQYGKAHRLPFDKSVTKSKAP-----LDLVHSDLMGPTSTPSYSGSRYMLLFVDDFTRYTWVYFVKEKSEVFSKFIEFKETVEGVVNRKIKCLRTDNGGEFTSNEFFSFCRQQGIKRELSCAYTPQQNGVAERKIRHLVETCKSWLHAKNLPKALWAEGMACAAYVINHVPLCPT-NFKSPYELMWGEKPNVKHFKVFGSTCYVHVPGNLRGKLDPKA 623
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A0V0IV83_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IV83_SOLCH) HSP 1 Score: 154 bits (388), Expect = 9.740e-39 Identity = 92/258 (35.66%), Postives = 129/258 (50.00%), Query Frame = 1
Query: 16 LWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
LWHLR GH + K L ++ +V G+ +S D CE C+ K R F + K R ++LI ADL GP +S+ G+RY L+ I+ YS W+Y L++KS+ L+ NQ R DRGGEF ++E F GI E TPE N ERK + MA + L A L +W + ++Y+ N P K T +E +KP+VSH+R FGCV Y +SS R+K++ KS
Sbjct: 448 LWHLRYGHLNIKGLKLLGDKGMVLGLPKISSLD---LCEGCIYGKQTRKSFPVG----KAWRASKCLELIYADLCGPMQTKSLGGSRYFLLFIDDYSGMSWVYFLESKSETFEKFQKFKALVENQSSCCIKVLRKDRGGEFVSNEFNLFCETNGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQAKELANQFWAEAVAASIYLLNLSPT-KVVMNKTPYEAWHCRKPNVSHLRVFGCVAYALVSSQARQKLDEKS 697
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA) HSP 1 Score: 153 bits (387), Expect = 1.410e-38 Identity = 86/261 (32.95%), Postives = 129/261 (49.43%), Query Frame = 1
Query: 4 NTKFLWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPK 786
N +LWHLR GH L +++ ++VNG+ N D CE CV K R F + K R ++++ D++GP+ + S+ GNRY L I+ YS CW+Y LK KS+A ++ Q G Y R+DRGGE+ +SF + GII + TP+ N ERK + MA + + L + +W + AVY+ N+ P K T E KP V H++ FGC+ Y + RKK++ +
Sbjct: 480 NESWLWHLRYGHLGFSGLKLLSKTNMVNGLPSINHPDQ--LCEACVKGKQHRQKFEVG----KSRRARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPT-KSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDR 733
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A6A3BY51_HIBSY (Histone acetyltransferase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BY51_HIBSY) HSP 1 Score: 152 bits (385), Expect = 2.760e-38 Identity = 86/258 (33.33%), Postives = 132/258 (51.16%), Query Frame = 1
Query: 13 FLWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPK 786
+LWHLR GH L +++ S+V G+ P + N+L CE C+ K R F + G + R ++++ D+ GPF + S+ GNRY L I+ +S CWIY LK KS+A + + Q G Y R+DRGGE+ + + F GII + TP+ N ERK + MA + + L + +W + AVY+ NR P K ++T E +KP V H++ FGC+ Y + RKK++ +
Sbjct: 328 WLWHLRYGHLGFSGLKLLSKTSMVKGL-PEINPPNQL-CEACIKGKQHRQSFEV-GRSWRARRP---LEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPT-KSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDR 578
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A2P6RE45_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RE45_ROSCH) HSP 1 Score: 151 bits (382), Expect = 3.600e-38 Identity = 88/258 (34.11%), Postives = 128/258 (49.61%), Query Frame = 1
Query: 16 LWHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
LWH R+GH + L VM ++V G+ + ++ CE C K+ R PFG I + R ++ I DL GP S +G RY+LIL++ +S + W+Y +K KS A + E++ LG + RTD GGEF +DE SF GI E A TP+ N E K L + L A L K W + A YV NRL + T +EL++ +KP V H + FG + Y + + R K++ K+
Sbjct: 447 LWHARLGHVNFDKLKVMVRKNLVKGLPSLTTFPSKEVCEGCQFGKSHRLPFG-----ISQSRSKAPLECIHGDLFGPTRTPSFSGLRYMLILVDDFSRFTWVYCIKQKSDAFSKFQEFKEIVEGVLGLKIKRLRTDNGGEFISDEFFSFCRWFGIRRELSCAETPQQNGIAEWKIRHLTETCRSWLHAKNLPKALWAEGMMCAAYVINRLHLSPN-NMKTPYELMFGEKPSVKHFKVFGSICYVHVPDSRRGKLDAKA 698
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A182GNT8_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GNT8_AEDAL) HSP 1 Score: 151 bits (382), Expect = 3.850e-38 Identity = 83/257 (32.30%), Postives = 132/257 (51.36%), Query Frame = 1
Query: 19 WHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
WH R GH + M ++ +G+V L CEPC+ K R+P K D ++DL+ DL GP + +GNR+++ +I+ +S Y +Y L KS+A +M + G P R+D GGE+ N+ LQSF +GI AE A TP+ N ER+ +L+ MA A L + L K YW + + A ++ NRLP+ T FE + +KP++++++ FGC + + + R K + K+
Sbjct: 412 WHRRFGHRDPAAVEKMVKENLCDGVV-VKDCGIRLTCEPCIEGKLSRTPIPKTAAKKTSD----VLDLVHTDLCGPMRTPTPSGNRFLMTVIDDHSRYAVVYLLAKKSEAPDKLMEYVRYVETLFGRKPKVVRSDSGGEYCNERLQSFFVREGIKAEYTTAYTPQQNGVAERRNRYLQEMATAMLIDAKLEKKYWGEAVMAAAHLQNRLPSRSVS--CTPFEKWFGRKPNLNYLKVFGCKAWVHVPDSKRGKFDSKA 661
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Match: A0A182G7X1_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G7X1_AEDAL) HSP 1 Score: 151 bits (381), Expect = 8.290e-38 Identity = 84/257 (32.68%), Postives = 134/257 (52.14%), Query Frame = 1
Query: 19 WHLRMGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGVKIKEDRQVCLMDLISADLTGPFSVRSVTGNRYVLILIEHYSDYCWIYPLKNKSQATANVMTLFELLHNQLGTYPNKFRTDRGGEFYNDELQSFLSNKGIIAESGPASTPEYNMKQERKQLFLETMANAQLDASPLTKGYWDLSWVVAVYVSNRLPAHKDKGFLTRFELLWNKKPDVSHMRPFGCVGYCALSSANRKKMNPKS 789
WH R GH + M ++ +G+V L CEPC+ K R+P +P K+ V +DL+ DL GP + +GNR+++ +I+ +S Y +Y L KS+A +M + G P R+D GGE+ N+ LQSF +GI AE A TP+ N ER+ +L+ MA A L + L K YW + + A ++ NRLP+ T FE + +KP++++++ FGC + + + R K + K+
Sbjct: 49 WHRRFGHRDPAAVEKMVKENLCDGVV-VKDCGIRLTCEPCIEGKLSRTP--IPKTAAKKTSNV--LDLVHTDLCGPMRTPTPSGNRFLMTVIDDHSRYAVVYLLAKKSEAPDKLMEYVRYVETLFGRKPKVVRSDSGGEYCNERLQSFFVREGIKAEYTTAYTPQQNGVAERRNRYLQEMATAMLIDAKLEKKYWGEAVMAAAHLQNRLPSRSVS--CTPFEKWFGRKPNLNYLKVFGCKAWVHVPDSKRGKFDSKA 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1146.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1146.6.1 >prot_H-akashiwo_Contig1146.6.1 ID=prot_H-akashiwo_Contig1146.6.1|Name=mRNA_H-akashiwo_Contig1146.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=255bp MGHASTKFLSVMNSYSVVNGMVPYNSSDNELFCEPCVLAKAKRSPFGLPGback to top mRNA from alignment at H-akashiwo_Contig1146:243650..244498+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1146.6.1 ID=mRNA_H-akashiwo_Contig1146.6.1|Name=mRNA_H-akashiwo_Contig1146.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=849bp|location=Sequence derived from alignment at H-akashiwo_Contig1146:243650..244498+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1146:243650..244498+ >mRNA_H-akashiwo_Contig1146.6.1 ID=mRNA_H-akashiwo_Contig1146.6.1|Name=mRNA_H-akashiwo_Contig1146.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=765bp|location=Sequence derived from alignment at H-akashiwo_Contig1146:243650..244498+ (Heterosigma akashiwo CCMP452)back to top |