mRNA_H-akashiwo_Contig1145.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1145.1.1
Unique NamemRNA_H-akashiwo_Contig1145.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A6U6L1J0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6L1J0_9STRA)

HSP 1 Score: 291 bits (744), Expect = 4.510e-91
Identity = 171/371 (46.09%), Postives = 232/371 (62.53%), Query Frame = 1
Query:    4 FYVIGTSHFRCNSAQEVSTLINDVRPDGVVLELDPERLLRLTLEGSMSDQD-----QLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETYDPSPLL--------RTLLREKA---TNMVDIPGAFVSDPFKLAPLIITISPALILLLFTLQRFQYMDFTADASLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAA--QNSGQEFGGHEQH-ALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNI---STPSTSSE-----YIGCVSCTNKFYSAVNIN-GTEGGIMDVIFERKGALAQVSHLRK-LSARPGTQKCLSCIEGMAHLFWM 1029
            + ++GTSH+RCNSA EV  LI DVRPDGVV+EL PER++RLT EG   D++       FGADFLAA++ ++ LDIPLF GDEY +ET S+  RTA   ETY P  L+        R +  E A      VD+PG F+SDP KL P +  ++PAL+LL+  +  F   D   + +  L+ +VSF+ +CKVFNT I+DRDD+L+ SA  A +V  +L+   T+RK WTF++  +       +SG   GG +Q   LPLFTLKTPLK G VRNLNLFEPRWL+M+D +N    ++P +  E       GCV+C NKFYSA +IN G EG   DV+F R+G +A + ++ +   A  G +K  + I G    FW+
Sbjct:    7 YTIVGTSHYRCNSASEVRDLIEDVRPDGVVVELCPERVIRLTKEGIRRDREGEEVQTPFGADFLAAVDAARALDIPLFAGDEYTKETRSRLARTAGRIETYGPGRLMMAFFPGLSRWVEGEGAGAGARFVDLPGTFLSDPLKLVPPLAAVTPALLLLVLAMPEFGVDDAGGNVAAVLATIVSFLATCKVFNTFISDRDDILAESAEHAANVAWSLRTGDTVRKTWTFSVDANQTEGVDSDSGDGDGGVDQFDGLPLFTLKTPLKLGAVRNLNLFEPRWLKMIDGVNSRGQTSPGSEREDELVPSFGCVACVNKFYSAASINDGREGRYADVVFRRRGTMAHLVNVAEGRRAVSGDRKVSAKIAG-GEEFWV 376          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A7S2KQ51_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KQ51_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.780e-81
Identity = 162/391 (41.43%), Postives = 225/391 (57.54%), Query Frame = 1
Query:    7 YVIGTSHFRCNSAQEVSTLINDVRPDGVVLELDPERLLRLTLE-----------------------GSMSDQDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETYDPSPLLRTLLRE------------KATNMVDIPGAFVSDPFKLAPLIITISPALIL---------------LLFTLQRFQYMDFTADA-SLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQHALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNI----STPSTSSEYIGCVSCTNKFYSAVNINGTEGGIMDVIFERKGALAQVSHLRKLSARP--GTQKCLSCIEG 1008
            +VIGTSHFRC+SA EV++LI  VRPDGVVLELDPER+LRLT +                        +   ++ L+G+DF+AA+ T Q++DIPLF GDEYAQET  + ++  F  E Y P PL+ +L+ +              T+ + +   F +DP KL PL ++ SP                   + ++      +D   +     LS+V+SF  SC +FNT+I +RD++L+ S +RA +V+ +LK+   IRKRW F + TS N  +     F    +  LPLFTLK PL +G  RNLNLFEPRWL+M+DS+      S+ S SS   GCV CTNKFYSA +++G EG   D+IFERKGALA ++ L++   RP  G +K    IEG
Sbjct:   69 FVIGTSHFRCSSAAEVTSLITQVRPDGVVLELDPERVLRLTKQYYGFDADGDTAQAQIDASVQTNPSNSGGEELLYGSDFVAAVTTCQEMDIPLFLGDEYAQETKQRLMQQLFRFEAYSPIPLVTSLVPDMTTTTKARATDISTTSRISLIDTFRTDPNKLTPLAVSSSPXXXXXXXXXXXXXXXXXXXIAYSSSSGALVDAVWNVLETSLSIVLSFFASCFLFNTVIVERDEILADSTIRAWNVLRSLKNGTFIRKRWEFRVNTSKNENETGASSFDATTE--LPLFTLKRPLIKGKRRNLNLFEPRWLKMIDSVTNEDYKSSSSASSPQFGCVRCTNKFYSAASVDGLEGRYADIIFERKGALASIAELKE-GKRPTSGDRKIGVTIEG 456          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: K0SJ23_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJ23_THAOC)

HSP 1 Score: 254 bits (649), Expect = 8.090e-77
Identity = 154/370 (41.62%), Postives = 217/370 (58.65%), Query Frame = 1
Query:    1 NFYVIGTSHFRCNSAQEVSTLINDVRPDGVVLELDPERLLRLTLE--------------------GSMSDQDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETYDPSPLLRTLLRE-----KATNMVDIPGAFVSDPFKLAPLIITISPALILLLFTLQRFQYMDFTADASL---------FLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQHALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNISTPSTSSEYIGCVSCTNKFYSAVNINGTEGGIMDVIFERKGALAQVSHLRKLSARPGTQKCLSCIEG 1008
            N +VIGTSHFRC SA EV++LI  VRPDG++LELDPER +RLT +                     S  + D L+GADF++AINT Q LDIPLF GDEYAQET S+    +   ++Y P PLLR+ +        +++ +DI   F SDP K  PL++T SP+++L    L    +   +A   +          LS+  S + S  +FNT+I DRD+VL+ SAL +  V+++LK  +++RKRW F    SVN  +  G +     Q  +P+FTLK PL +G+ RNLNLFEPRWL+M+DSL+    S +    GCV C NKFYS + +   EG   D+IF+RKG +A++  + +     G ++    IEG
Sbjct:   48 NVFVIGTSHFRCGSAVEVASLIAKVRPDGLLLELDPERTVRLTKQFHRFNADGEKIPEREQQRGPESNVNGDLLYGADFVSAINTCQDLDIPLFLGDEYAQETFSRLREKSLDWKSYSPVPLLRSFMTNMSRGVSSSDFIDIVQTFRSDPQKATPLLVTTSPSVVLASGLLALSAHSGASAHDGVSSLADMGETLLSVTFSALLSSLLFNTIIRDRDEVLAQSALNSIDVLSSLKQGQSVRKRWRF----SVNDDRGDGDKTLTSSQ--IPIFTLKRPLLKGIERNLNLFEPRWLKMIDSLS----SEAEARFGCVQCVNKFYSTIAVGDKEGRYADIIFKRKGRIARIKRIEEGKRPSGDRRIGVTIEG 407          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A448YVA2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVA2_9STRA)

HSP 1 Score: 246 bits (627), Expect = 3.970e-72
Identity = 173/455 (38.02%), Postives = 240/455 (52.75%), Query Frame = 1
Query:    1 NFYVIGTSHFRCNSAQEVSTLINDVRPDGVVLELDPERLLRLTLE--------------GSMSD-QDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETYDPSPLLRTLLR------EKATNM--------VDIPGAFVSDPFKLAPLIITISPALILLLFTLQRFQYMDFTADAS---------------LFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQH----ALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNIST-------------PSTSS-------EYIGCVSCTNKFYSAVNI-----NGTEGGIMDVIFERKGALAQVSHLRKLSARPGTQKCLSCIEGMAHLFWMTRRMFGLSRMDISWHPNFGLLKKKNIAPMIKGKKLISSL 1146
            N+YVIGTSHFRC+S +EVS LI  V PDGVV+ELDPERLLRLTL+              G+M     + FG DFL+AI TS++LDIP+F GDEY  ET  +F+ T     +Y+P+ +L+ L        ++ TN         VD+ G F+ DP KL PL+ T+S   ++L+F +       F  + S                 LSLV+SF  SCKVFN LIADRD V++S+   A   +  LK  + IRKRWTF  P +    + + +E  G+        +PLFTLK  L++  VRNLNLFEPRWL+M+D L +S              P+T           IGCV+C NKFYSA+N+        EG   DVIF R+G    + ++ + S   G +K  + I G    F ++      +  +IS  P  G L   N+ P+ + +   S++
Sbjct:  114 NYYVIGTSHFRCDSYKEVSDLICRVNPDGVVIELDPERLLRLTLDDASVRVAAAETTGAGAMEMIGKRWFGGDFLSAIETSKELDIPIFLGDEYPLETKQRFIDTVLDANSYNPTNILKALQSLFRTRLDRTTNSNSKVLSINVDVVGTFLDDPRKLLPLVATLSVPCLILIFAIALDTTSVFPTNVSPHDGAMLDSFFQMLATLLSLVLSFFASCKVFNNLIADRDAVIASNIQNAVTTLFMLKSKQLIRKRWTF--PATEMEDECAHKEAPGNPNKLASSGIPLFTLKNALEQDAVRNLNLFEPRWLKMIDRLLLSNQKQKLTTNRXAVDPATKDASASGEQRIIGCVTCRNKFYSAINVAEASRGFVEGRYADVIFRRRGRFGHLINVTEGSRPSGARKVRAEILGK-ETFDLSSPTDDGNADEISVTPE-GYLTASNLVPIDENESTTSTM 564          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A1E7F6J3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6J3_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.570e-65
Identity = 169/467 (36.19%), Postives = 222/467 (47.54%), Query Frame = 1
Query:    1 NFYVIGTSHFRCNSAQEVSTLINDVRPDGVVLELDPERLLRLTLEGS----MSDQDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETYDPSPLLRTLL----REKATN----------------MVDIPGAFVSDPFKLAPLIITISPALILLLFTL----------------------------------QRFQYMDFTADASLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEF------------------GGHEQHALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNISTP--------------------------------------------STSSEYIGCVSCTNKFYSAVNINGT-----------EGGIMDVIFERKGALAQVSHLRKLSARPGTQKCLSCIEG 1008
            N+YVIGTSHF CNS  EVS LIN VRPD  V+ELDPER LRLTL+ +    + + ++LFGADFL+AI TS++LDIP+F GDE   ET ++ L + F  ++Y    LL TL+    R +  N                 VD+ G F+ DP KL PL+ T+S  ++ L  T+                                         F    ++ LSL++SFV SCKV+N LIADRD V++S+A RA   IA L+ N+ IRKRWTF  P S + A N G  +                         +PLFTLKTPL++  VRNLNLFEPRWL+M+D L +S                                              S   + IGCV C NKFYSAVNI              EG   DVIF R+G   ++  + + +   G +K  + I G
Sbjct:   64 NYYVIGTSHFSCNSYNEVSALINLVRPDACVIELDPERTLRLTLDHASTTRIENTNRLFGADFLSAIETSKELDIPIFLGDESPIETRARLL-SLFDVDSYKSDKLLSTLVSLFRRSRNRNKDSQNKNQTDDQSEIFFVDVLGTFLDDPRKLLPLVTTLSLPVLALTLTIIVDGSTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEILPTI-LSLLISFVASCKVYNNLIADRDIVVASNAQRAAETIALLQSNQLIRKRWTF--PASASVATNYGSTYEEVVTEEEVNDKSSTPSASASASATIPLFTLKTPLEKNAVRNLNLFEPRWLKMIDRLLLSKQKQQGINNGEEASASVCVDTFTDATDTTRXXXXXINNNVRIKDNNSVEQQTIGCVICENKFYSAVNIAEAAEGNEKSLPFVEGRYADVIFRRRGRFGELQCVTEGNRPSGARKVSARIVG 526          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A7S0C0B4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0B4_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.330e-38
Identity = 85/216 (39.35%), Postives = 124/216 (57.41%), Query Frame = 1
Query:  520 VFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQH--------ALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSL--------NISTPSTSSEYIGCVSCTNKFYSAVNINGTEGGIMDVIFERKGALAQVSHLRKLSARPGTQKCLSCIEGMAHLFWMTRRMFGLSRMDISWHPNFGLLKKKNIAPMI 1119
            VFN LI DR+++L+S A++A  VI++LK+++ +RKRWTF+   + +  QN  Q+ G               PLFTLKTPL+ G  R LNLFEPRWL+M+D +        + ST + SS   GCV+C NKFYSA +I G EG   DVIF  +G LA +  L++ S   G +K +  IEG        R  F + + D+S   + G +    ++P++
Sbjct:    1 VFNVLIEDRNEILASKAMKAARVISSLKNDEIVRKRWTFSTVNNDDIEQNWKQDDGNESDKRNVSNTPKGTPLFTLKTPLRPGETRRLNLFEPRWLKMIDMVYYNKSSLDSSSTANLSSPLFGCVTCPNKFYSATSIGGNEGRYADVIFSPQGTLAAIVDLKEDSRPSGARKVVVTIEG--------REAFEVKKDDVSVATD-GYMVASKLSPVV 207          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A7S1C032_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C032_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.920e-35
Identity = 75/170 (44.12%), Postives = 105/170 (61.76%), Query Frame = 1
Query:  466 ADASLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQHA------LPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNISTPSTSSEYIGCVSCTNKFYSAVNI-NGTEGGIMDVIFERKGALAQVSHL 954
            AD +  L+L  SF+   KV+N LIADRD VL+ S  RA   +A L+    +RKRWTF++           +E GG    A      +PLFTLK PL++G  RNL+LFEPRWLRM+D +   + S  +   GCV+CTNKFY A+++ +G EG   DVIF R+G +A+++ +
Sbjct:    2 ADLATSLALAGSFLLCAKVYNALIADRDAVLAESMARAARAMAELRSGDAVRKRWTFSVDGG------GAREIGGEGAAATLADGGVPLFTLKRPLEKGAARNLSLFEPRWLRMIDDVAAESSSAEAGTFGCVACTNKFYGALDLGDGAEGRYADVIFRRRGRVAEITDI 165          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A8J2T155_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T155_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.000e-23
Identity = 96/341 (28.15%), Postives = 158/341 (46.33%), Query Frame = 1
Query:   10 VIGTSHFRCN-SAQEVSTLINDVRPDGVVLELDPERLLRLTLEGSMSDQDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAF-LPETYDPSPLL--RTLLREKATNMVDIPGAFVSDPFKLAPLIITISPALILLLFTLQRFQYMDFTADASLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTF-TIPTSVNAAQNSGQEFGGHEQHALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSL-NISTPSTSSEYIGCVSCTNKFYSAVNINGTEGGIMDVIFERKGA-LAQVSHLRKLSARPGTQKCLSCIEGM 1011
            VIGT+H       +EV  LI +V+PD V++ELD ERL     E + +  ++ +G +  AA+  ++++D P+  GD      A    R  F L  T     LL  + +        +D+  A  SDP K  PL+   S   +    T Q         +A+     + S + S +V + L+  RDDVLS +ALRA  + + L+ +   R R+ F T P    +A      F   E    P  TL++PL  G  R +NLFEPRWL ++D++   +  S     +  +   N+ Y    +   +G   DV+ +  GA +A++  + +     G ++    + G+
Sbjct:   33 VIGTAHTPSRRQREEVEALIAEVKPDAVLVELDAERL-----EFAWNQPEEAYGGELAAAVRAARRIDAPVVLGDACRPLPAVVEARPLFDLERTRRAWRLLVKKPVATGVGVERIDVAQALASDPRKALPLLFAASVGAVATAATAQATPIDAPVIEAAADAVAIASSIVSARVADVLLVARDDVLSENALRALDLGSRLRSSALERHRFRFGTDPAECRSA---AAPFFASEGPERPFLTLRSPLSVGERRRMNLFEPRWLALLDNIAGENGGSLLGASLATIHAANRCY----LRDGDGVDADVVVDPHGACVAKIERVEESKRPSGARRVAVWLRGV 361          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A0A7S0B0Q2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B0Q2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 2.480e-22
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 1
Query:  706 LPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSLNISTPSTSSEY--IGCVSCTNKFYSAVNINGTEGGIMDVIFERKGALAQVSHLRKLSARP--GTQKCLSCIEG 1008
            +PLFTLKTPL++G VRNLNLFEPRWL+M+D +     S  ++    GCV+CTNKFYSA+ I+G EG   D+IF R+G +A +  L +   RP  G +K    IEG
Sbjct:    3 IPLFTLKTPLEKGRVRNLNLFEPRWLKMIDDVTSRQKSGDAQQQSFGCVTCTNKFYSAIQIDGNEGRYADIIFRRRGTMANMIKLVE-GTRPVSGDRKVNVQIEG 106          
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Match: A4S6R3_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S6R3_OSTLU)

HSP 1 Score: 108 bits (270), Expect = 9.020e-22
Identity = 91/288 (31.60%), Postives = 132/288 (45.83%), Query Frame = 1
Query:    4 FYVIGTSHFRCNSAQEVSTLINDVRPDGVVLELDPER---LLRLTLEGSMSDQDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETYDPSPLLRTLLREK--------------ATNMVDIPGAFVSDPFKLAPLIITISPALILLLFTLQRFQYMDFTADA-----SLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVIAALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQHALPLFTLKTPLKRGMVRNLNLFEPRWLRMVDSL 801
            FYV+GTSH    +A +V  +I   +P  VVLELD ER   L+   +E +    D  +G+D L  I  S++ D     GD  A+         AF    +        L   K              A    D+  A + +P  L PL     PA   +  TL      +   +       +FL+L++     C +  TL  +RD+VL ++AL A  V + +   +  R R+ F+  T  +A + S Q F   +  A+P FTLK PLKRG  R LNL+EPRWL ++DSL
Sbjct: 1032 FYVVGTSHASAAAAADVRRVIRRAKPQAVVLELDQERADALVASFVERARVIDDSEYGSDLLTGIIESEREDALTVYGDVRARGIGEALAARAFGTNPFAIERWKTVLAYVKNAWDGGSVGVSSDGALAAADVARALMDEPRNLTPLA---GPAAAFVAATLASLAMPNGAENGLVDAVGVFLALLLF----CPLVETLWMERDEVLCANALNAVDVCSGIARGRVRRVRFGFS--TDPSATKKSMQTFTPSDAGAVPCFTLKRPLKRGETRRLNLWEPRWLALMDSL 1310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1145.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6U6L1J0_9STRA4.510e-9146.09Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2KQ51_9STRA2.780e-8141.43Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0SJ23_THAOC8.090e-7741.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448YVA2_9STRA3.970e-7238.02Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F6J3_9STRA2.570e-6536.19Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S0C0B4_9STRA2.330e-3839.35Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1C032_9STRA2.920e-3544.12Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J2T155_9STRA4.000e-2328.15Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S0B0Q2_9STRA2.480e-2251.43Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A4S6R3_OSTLU9.020e-2231.60Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1145contigH-akashiwo_Contig1145:86308..87566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog159749.K0SJ23
Model size1193
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.89e-59
EggNOG OGs2EUSS@1|root,2SWWB@2759|Eukaryota
Cds size1008
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387096.5078375-UTR-H-akashiwo_Contig1145:86307..863511681387096.5078375-UTR-H-akashiwo_Contig1145:86307..86351Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1145 86308..86351 -
1681387096.5311837-UTR-H-akashiwo_Contig1145:87425..875661681387096.5311837-UTR-H-akashiwo_Contig1145:87425..87566Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1145 87426..87566 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387096.5158994-CDS-H-akashiwo_Contig1145:86351..863991681387096.5158994-CDS-H-akashiwo_Contig1145:86351..86399Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 86352..86399 -
1681387096.52335-CDS-H-akashiwo_Contig1145:86465..874251681387096.52335-CDS-H-akashiwo_Contig1145:86465..87425Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 86466..87425 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1145.1.1prot_H-akashiwo_Contig1145.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1145 86352..87425 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1145.1.1

>prot_H-akashiwo_Contig1145.1.1 ID=prot_H-akashiwo_Contig1145.1.1|Name=mRNA_H-akashiwo_Contig1145.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=336bp
MSDQDQLFGADFLAAINTSQKLDIPLFTGDEYAQETASKFLRTAFLPETY
DPSPLLRTLLREKATNMVDIPGAFVSDPFKLAPLIITISPALILLLFTLQ
RFQYMDFTADASLFLSLVVSFVGSCKVFNTLIADRDDVLSSSALRARHVI
AALKDNKTIRKRWTFTIPTSVNAAQNSGQEFGGHEQHALPLFTLKTPLKR
GMVRNLNLFEPRWLRMVDSLNISTPSTSSEYIGCVSCTNKFYSAVNINGT
EGGIMDVIFERKGALAQVSHLRKLSARPGTQKCLSCIEGMAHLFWMTRRM
FGLSRMDISWHPNFGLLKKKNIAPMIKGKKLISSL*
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mRNA from alignment at H-akashiwo_Contig1145:86308..87566-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1145.1.1 ID=mRNA_H-akashiwo_Contig1145.1.1|Name=mRNA_H-akashiwo_Contig1145.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1259bp|location=Sequence derived from alignment at H-akashiwo_Contig1145:86308..87566- (Heterosigma akashiwo CCMP452)
AATTTTTACGTTATTGGCACCTCACATTTCCGGTGCAACTCGGCGCAAGA GGTCTCTACCTTGATAAATGACGTACGCCCGGATGGCGTGGTTCTTGAGT TAGATCCAGAAAGACTACTTCGGCTCACGCTAGAGGGCTCGATGTCGGAC CAAGATCAATTATTTGGTGCTGATTTTCTGGCAGCCATAAACACATCTCA AAAGCTGGACATCCCGTTGTTTACTGGCGACGAATATGCACAAGAGACTG CTTCAAAGTTTTTACGGACTGCATTTTTGCCGGAAACCTACGATCCAAGC CCGCTACTGCGTACCCTTTTACGAGAAAAGGCTACGAATATGGTTGATAT TCCGGGAGCGTTCGTTTCGGATCCTTTCAAACTTGCCCCCCTGATCATTA CAATCAGTCCAGCACTGATTCTACTGCTGTTTACGTTGCAGAGATTTCAA TACATGGATTTCACTGCTGATGCATCTCTGTTTTTGTCTCTCGTTGTGTC TTTTGTAGGAAGTTGCAAGGTCTTCAACACCTTGATAGCAGATCGTGACG ACGTTTTGTCTTCAAGTGCGCTCAGAGCTCGCCATGTCATTGCGGCGCTG AAAGATAATAAGACAATCAGGAAACGGTGGACATTTACTATACCAACCTC TGTGAATGCAGCACAAAATTCTGGCCAAGAATTTGGAGGGCACGAGCAAC ACGCCCTTCCGCTGTTTACGCTCAAGACCCCTTTGAAGAGAGGAATGGTT CGTAATCTCAACCTTTTTGAGCCCCGTTGGTTGAGAATGGTTGACAGCTT AAACATTTCCACACCATCCACCTCCTCAGAATATATTGGGTGCGTCTCCT GTACCAACAAATTTTACAGTGCTGTCAATATTAATGGCACGGAGGGCGGT ATCATGGATGTCATTTTTGAGAGGAAGGGGGCACTTGCACAAGTGTCTCA TTTAAGGAAGCTCAGCGCCCGTCCGGGCACGCAAAAGTGCTTGTCTTGTA TAGAAGGGATGGCTCATTTATTCTGGATGACGAGAAGGATGTTTGGGCTG TCAAGGATGGATATCTCGTGGCATCCAAATTTCGGACTGTTGAAGAAGAA GGTATTTCTGAATGCATAGTGGAGGATGGCAGCGGCCAAAAAATGCACCA TCCCAGTAGAAGCTCAGAATATTGCACCGATGATAAAGGGCAAGAAATTA ATATCATCATTGTAGTAGGATTACTCCATGCAAATGGAGTCATAGAACGT TTGTCTCGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1145:86308..87566-

>mRNA_H-akashiwo_Contig1145.1.1 ID=mRNA_H-akashiwo_Contig1145.1.1|Name=mRNA_H-akashiwo_Contig1145.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1008bp|location=Sequence derived from alignment at H-akashiwo_Contig1145:86308..87566- (Heterosigma akashiwo CCMP452)
ATGTCGGACCAAGATCAATTATTTGGTGCTGATTTTCTGGCAGCCATAAA
CACATCTCAAAAGCTGGACATCCCGTTGTTTACTGGCGACGAATATGCAC
AAGAGACTGCTTCAAAGTTTTTACGGACTGCATTTTTGCCGGAAACCTAC
GATCCAAGCCCGCTACTGCGTACCCTTTTACGAGAAAAGGCTACGAATAT
GGTTGATATTCCGGGAGCGTTCGTTTCGGATCCTTTCAAACTTGCCCCCC
TGATCATTACAATCAGTCCAGCACTGATTCTACTGCTGTTTACGTTGCAG
AGATTTCAATACATGGATTTCACTGCTGATGCATCTCTGTTTTTGTCTCT
CGTTGTGTCTTTTGTAGGAAGTTGCAAGGTCTTCAACACCTTGATAGCAG
ATCGTGACGACGTTTTGTCTTCAAGTGCGCTCAGAGCTCGCCATGTCATT
GCGGCGCTGAAAGATAATAAGACAATCAGGAAACGGTGGACATTTACTAT
ACCAACCTCTGTGAATGCAGCACAAAATTCTGGCCAAGAATTTGGAGGGC
ACGAGCAACACGCCCTTCCGCTGTTTACGCTCAAGACCCCTTTGAAGAGA
GGAATGGTTCGTAATCTCAACCTTTTTGAGCCCCGTTGGTTGAGAATGGT
TGACAGCTTAAACATTTCCACACCATCCACCTCCTCAGAATATATTGGGT
GCGTCTCCTGTACCAACAAATTTTACAGTGCTGTCAATATTAATGGCACG
GAGGGCGGTATCATGGATGTCATTTTTGAGAGGAAGGGGGCACTTGCACA
AGTGTCTCATTTAAGGAAGCTCAGCGCCCGTCCGGGCACGCAAAAGTGCT
TGTCTTGTATAGAAGGGATGGCTCATTTATTCTGGATGACGAGAAGGATG
TTTGGGCTGTCAAGGATGGATATCTCGTGGCATCCAAATTTCGGACTGTT
GAAGAAGAAGAATATTGCACCGATGATAAAGGGCAAGAAATTAATATCAT
CATTGTAG
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