mRNA_H-akashiwo_Contig114.18.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 526 bits (1356), Expect = 3.080e-187 Identity = 256/281 (91.10%), Postives = 270/281 (96.09%), Query Frame = 1
Query: 1 MELHDHLVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGDLVLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
MELHDHL SLGF+RSGHESCLY RDGG+ELMVAVYVDDLVISGSSQA+VS+FKQ LASKY LTDQG LTQILGIKVVRDKR KCF+LSQTSFIKDAL KFGLDYLPACKTP+DHTVDLTPTPGF+A+LSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQ NPEPKHFEAVQRAFRY+KGTQSESLRLGGDLVLRA+SD+DFCNDR+DGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL E+GCPQH+PTPVVEDN
Sbjct: 1 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDN 281
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 337 bits (865), Expect = 7.590e-114 Identity = 165/182 (90.66%), Postives = 173/182 (95.05%), Query Frame = 1
Query: 1 MELHDHLVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYI 546
MELHDHL SLGF+RSGHESCLY RDGG+ELMVAVYVDDLVISGSSQAIVS+FKQ LASKY+LTDQG LTQILGIKVVRDKR KCF+LSQTSFIKDAL KFGLDYLPACKTPIDHTVDLTPTPGF+A+LSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQ NPEPKHFEAVQRAFRY+
Sbjct: 87 MELHDHLESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 219 bits (557), Expect = 2.040e-61 Identity = 111/282 (39.36%), Postives = 181/282 (64.18%), Query Frame = 1
Query: 7 LHDHLVSLGFQRSGHESCLYTRRDG-GSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLS--DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGDLVLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
L+ L+ G+ R+G++SC+Y++ G + +++VYVDD+V++ S ++ +S K+ ++ Y+++D G + ILGIKV RD+ + LSQ SFI++A KF + P++ +D+ +LS +A +RS+VGT+ W+A WT PE+A+++H L + ++P A RY+ T+ + + LGG L L AY+DADFC++R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++LR+AV D+MWL+ LL LG Q P+ EDN
Sbjct: 647 LNGFLLQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDN 927
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A507DKM5_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DKM5_9FUNG) HSP 1 Score: 202 bits (514), Expect = 2.000e-59 Identity = 116/291 (39.86%), Postives = 172/291 (59.11%), Query Frame = 1
Query: 7 LHDHLVSLGFQRSGHESCLYTRR--DGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLS---DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGDLV-LRAYSDADFCNDRIDGKSVTGYILFLGDA-PIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQH-----DPTPVVEDN 843
LH L SLGF+R +++ +Y R S ++VYVDDL+I +++ +S K L +++++TD G + LG++V RD YL Q S++ D L +FG+ TP+D T L P K S YR +VG+L ++ TRP++A AV L R SNP P+H +A +R RY++GT SL +GG+ V L YSDAD+ N+ ID +S+TGY+ ++G+A P+ W+SK Q V S+ EAEY+AL A ++ +WL SLL EL P++ PT + EDN
Sbjct: 16 LHKELTSLGFKRLANDNAVYIRTLPKSDSSQYISVYVDDLLIFAKTKSEISSIKTSLHNEFNMTDLGEVNHYLGMRVRRDYSRHVIYLDQESYVNDILERFGMQDCKPVNTPMDRT-KLEPYEVENTKTSPNPQEGEYRKIVGSLVYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSDYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFYIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETIWLCSLLQELQIPEYLDENARPTTIYEDN 305
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A2P4YNZ8_9STRA (Retrovirus-related pol Polyprotein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YNZ8_9STRA) HSP 1 Score: 196 bits (498), Expect = 5.880e-58 Identity = 105/282 (37.23%), Postives = 165/282 (58.51%), Query Frame = 1
Query: 16 HLVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLT----PTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGDL--VLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
HL ++GF+ C+YTR +G SE +V +YVDD++I+ + I++ K +A K+ + D G ILGI++ D K +SQ ++ + + KFGL+ T +D +V LT P + + YRS+VG+L ++A TRP++A AV KL R NP+ +H++A + RY+ T+ ++ G + L AYSDAD+ +R D +SV+G +L + AP+VW S Q V S+ EAEY+AL +K+++W+R LL +G QH PT + EDN
Sbjct: 4 HLKTMGFKAGDAGPCVYTRGEGDSECIVCLYVDDMLIASREKDIIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERKALTISQRAYTEPIINKFGLENAKPSLTSLDPSVHLTKADEPQNADDKAKMKSKPYRSLVGSLMYLACGTRPDIAVAVAKLSRYLENPDHRHWDAGIKVVRYLMKTKDAAITYDGRMGTELTAYSDADWAGNRDDRRSVSGVMLMMCGAPVVWRSTFQKTVALSSTEAEYMALSDCIKEVVWMRRLLKNIGAAQHGPTVIYEDN 285
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A2N9HCU5_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HCU5_FAGSY) HSP 1 Score: 202 bits (515), Expect = 1.380e-55 Identity = 113/277 (40.79%), Postives = 158/277 (57.04%), Query Frame = 1
Query: 19 LVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGD--LVLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
+ GF S ++S L+ R S ++ +YVDD++I+G A + D +++L+ +++ D G L+ LG++V G +YLSQ + D L K GL TP++ V L PT G LSDA LYR +VG+L ++ TRP+LA+AVH + + S P H+ AV R RYIKGT L L LRAY+DAD+ D ID +S TGY LG + I W SK Q V S+ EAEY AL A +++WLR LL ++G PQ TP+ DN
Sbjct: 696 VAQQGFTPSSYDSALFIRHTSTSIALILLYVDDMIITGDDTAGIRDLQKFLSQHFEMKDLGTLSYFLGLEVTSSSDG--YYLSQAKYASDLLSKAGLTDSKTVFTPLELNVKLNPTDG--EPLSDATLYRQLVGSLIYLTV-TRPDLAYAVHLVSQFMSAPRSTHYAAVLRILRYIKGTLFHGLHFSAQSSLELRAYADADWAGDPIDRRSTTGYCFLLGSSLISWRSKKQSVVARSSTEAEYRALADATSELLWLRWLLTDMGAPQTTSTPIHCDN 967
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A6A3HKQ8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HKQ8_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.080e-54 Identity = 106/283 (37.46%), Postives = 166/283 (58.66%), Query Frame = 1
Query: 16 HLVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTP-----TPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGDL--VLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
HL S+GF+ + + C+YTR +G E +V +YVDD++I+ + +++ K +A K+ + D G ILGI++ D + +SQ ++ + + KFG + C TP++ V LT T +AK+ + YRS+VG+L ++A TRP+++ AV KL R NP KH++A + RY+ T+ + G L L AYSDAD+ +R D +SV+G +L L AP+VW S Q V S++EAEY+AL VK+ +W+R LL ++G Q T + EDN
Sbjct: 78 HLKSMGFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKTVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEVKAKMK-SKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSIEAEYMALSDCVKECVWMRRLLEDIGPEQVGATVIYEDN 359
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A2K3MW90_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MW90_TRIPR) HSP 1 Score: 199 bits (505), Expect = 3.630e-54 Identity = 110/277 (39.71%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 19 LVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGD--LVLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
L GF S H+S L+TRR +++ +YVDD++I+G + +S +QYL+ +++ D G L+ LG++V +D G +YLSQ + D L + G+ TP++ LTP G L DA YR +VG+L ++ TRP++A+AVHK+ + + P HF AV R RY+KGT LR + LVL YSDAD+ D D S TGY FLG + I W SK Q V+ S+ E+EY AL A +++WLR LL ++G Q T + DN
Sbjct: 781 LTQFGFLSSPHDSALFTRRSDSGIVILLLYVDDMIITGDDKTGISALQQYLSQHFEMKDLGSLSYFLGLEVSQDSDG--YYLSQAKYASDLLSRAGITDCKTELTPLEVNCKLTPLDG--TPLEDATRYRQLVGSLVYLTV-TRPDIAYAVHKVSQFMAAPRSSHFSAVLRIIRYVKGTLFHGLRFSANSSLVLSGYSDADWGGDPTDRCSTTGYCFFLGSSLISWRSKKQTVVSRSSTESEYRALADAASELLWLRWLLEDMGVTQSSATTLHCDN 1052
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: A0A6A3VCN8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VCN8_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.850e-54 Identity = 104/282 (36.88%), Postives = 163/282 (57.80%), Query Frame = 1
Query: 16 HLVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANL----YRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGGDL--VLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
HL S+GF+ + + C+YTR +G E +V +YVDD++I+ +A+++ K +A K+ + D G IL I++ D + +SQ ++ + + KFG + C TP++ V LT + + A + YRS+VG+L ++A TRP+++ AV KL R NP KH++A + RY+ T+ + G L L AYSDAD+ +R D +SV+G +L L AP+VW S Q V S+ EAEY+AL VK+ +W+R LL ++G Q T + EDN
Sbjct: 23 HLKSMGFEPADADPCVYTRGEGEDECIVRLYVDDMLIASRQKAVIASEKAGIAEKFRIKDMGRARFILSIEIDYDIERRTLGISQKAYTESIIKKFGQENTKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDN 304
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Match: UPI000CD8E793 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8E793) HSP 1 Score: 189 bits (479), Expect = 6.960e-54 Identity = 109/277 (39.35%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 19 LVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVSDFKQYLASKYDLTDQGGLTQILGIKVVRDKRGKCFYLSQTSFIKDALVKFGLDYLPACKTPIDHTVDLTPTPGFEAKLSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQSNPEPKHFEAVQRAFRYIKGTQSESLRLGG--DLVLRAYSDADFCNDRIDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAELGCPQHDPTPVVEDN 843
+ SLGF S ++S L+T+ +++ +YVDD++I+GS + D KQ L+S +++ D G L LG++V+ G YLSQ + D + + G+ TP+D L+P G + LSD LYR +VG+L ++ TRP+LAFAVH + + ++P H+ AV R RYIKGT L L LRA+SDAD+ D D +S TG+ FLGD I W SK Q V S+ EAEY AL ++++WLR LL+++G PT + DN
Sbjct: 56 IQSLGFTASNYDSGLFTKTTTSGTILLILYVDDMIITGSDAHGILDLKQSLSSYFEMKDLGLLHYFLGLEVLPHDTG--IYLSQAKYASDIISRAGITDCKVANTPLDPNFHLSPGDG--SLLSDPTLYRQLVGSLIYLTV-TRPDLAFAVHIVSQFMASPRTTHYIAVLRILRYIKGTIFHGLYFSSTSSLELRAFSDADWDGDITDRRSTTGFCFFLGDLLISWRSKKQSLVARSSTEAEYRALADTTQELVWLRWLLSDMGLSLSSPTVIWCDN 327 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig114.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig114.18.1 >prot_H-akashiwo_Contig114.18.1 ID=prot_H-akashiwo_Contig114.18.1|Name=mRNA_H-akashiwo_Contig114.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=281bp MELHDHLVSLGFQRSGHESCLYTRRDGGSELMVAVYVDDLVISGSSQAIVback to top mRNA from alignment at H-akashiwo_Contig114:1250302..1251144- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig114.18.1 ID=mRNA_H-akashiwo_Contig114.18.1|Name=mRNA_H-akashiwo_Contig114.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=843bp|location=Sequence derived from alignment at H-akashiwo_Contig114:1250302..1251144- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig114:1250302..1251144- >mRNA_H-akashiwo_Contig114.18.1 ID=mRNA_H-akashiwo_Contig114.18.1|Name=mRNA_H-akashiwo_Contig114.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=843bp|location=Sequence derived from alignment at H-akashiwo_Contig114:1250302..1251144- (Heterosigma akashiwo CCMP452)back to top |