mRNA_H-akashiwo_Contig1138.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A7S4DBC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBC8_HETAK) HSP 1 Score: 307 bits (787), Expect = 2.850e-100 Identity = 167/185 (90.27%), Postives = 171/185 (92.43%), Query Frame = 1
Query: 247 LKFSHKGGNWRCAG---RDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRILKV 792
+K +GG AG DLIIFTLLYADDVVLIAKEAAHLQRLLNSLD FCGVSAMSVNISKTM+VPFFSK+PLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASF SFFSDIENLPNLKTSLIVRLYHTLVLSVLLYN EVWGLLILKGSLKKLEKFHLSCLKRILKV
Sbjct: 2 VKILAQGGG-ELAGVQVGDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDVFCGVSAMSVNISKTMIVPFFSKSPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASF-SFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNVEVWGLLILKGSLKKLEKFHLSCLKRILKV 184
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK) HSP 1 Score: 288 bits (736), Expect = 2.950e-89 Identity = 155/265 (58.49%), Postives = 190/265 (71.70%), Query Frame = 1
Query: 7 CAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKFSHKGGNWRCAGR--DLIIFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFF-SKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRILKV 792
CAFVDFRKAYD+V+HS+LW RL SLG+GPKL ELL+SIY KV+C+VR LS F Y +GVRQGC+LSP++FNLFI + + + DL++F LLYADDVVL+A AA L LL SL FC S M+VN+ KT VV F S++P + +F NK L+VVNEYKYLGC+ D++L+F FHI AAL+RA +ASF S F I N+K SL +RLY TLVLSVLL+N EVWG L K L+KLEKFHLSCL+RIL V
Sbjct: 182 CAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVIQQNSDSLSGIEIGDLVVFILLYADDVVLVADNAADLSSLLRSLQEFCTASGMNVNVKKTKVVIFGKSRDPTNLPVVLFDNKPLEVVNEYKYLGCFVDKDLNFSFHIGAALKRAERASF-SLFRCIGGFRNMKVSLKLRLYKTLVLSVLLFNVEVWGHLARKVDLRKLEKFHLSCLRRILMV 445
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A8H8XFJ2_9GAMM (Reverse transcriptase domain-containing protein n=3 Tax=Bathymodiolus brooksi thiotrophic gill symbiont TaxID=1052209 RepID=A0A8H8XFJ2_9GAMM) HSP 1 Score: 157 bits (397), Expect = 5.140e-40 Identity = 95/278 (34.17%), Postives = 155/278 (55.76%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFI---VSWLKFSHKGGNWRCAGRDLI-----------IFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRILKV 792
++CAF+D+RKA+D+V +LW +LL + ++ +++++Y K VR G+N S FF +GVRQG LSPL+F++F+ ++ ++ G N C L+ ++ LLYADD V+ A+ AA LQ LN++ +C + VN +KT VV F + F++ N++L VV+E++YLG F R+ +F + +Q+A KA F + +L ++++L+ +V +LLY AEVWG K + E HL K I+KV
Sbjct: 352 LYCAFIDYRKAFDSVDRILLWQKLLRTSIDGNMLVIIQNMYKNAKSCVRDGSNCSDFFPSNIGVRQGENLSPLLFSVFLNDLTEFMSHAYNGLNDVCNISHLLFDNDDIEVYFKLYLLLYADDTVIFAETAAELQSALNAMYLYCETWKLKVNTAKTNVVIFSKSRQSENIDFIYNNERLTVVDEFQYLGTIFSRKGNFGRNKARLVQQARKAMF--YVLRKARKLSLPIDILLQLFDVMVAPILLYGAEVWGYE--KNDIS--ETLHLEFCKYIMKV 623
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A8J2MDS5_COTCN (Similar to jockey\pol: RNA-directed DNA polymerase from mobile element jockey (Drosophila funebris) n=1 Tax=Cotesia congregata TaxID=51543 RepID=A0A8J2MDS5_COTCN) HSP 1 Score: 148 bits (374), Expect = 2.280e-39 Identity = 90/263 (34.22%), Postives = 145/263 (55.13%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLK-FSHKGGNWRCAGRDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRIL 786
+F FVDF++A+D+V H +LWN+L G+ PK+ +LK +Y + C +R G LS F+ GV QG +LSPL+F L++ +K F K + + LLYADD+V+++ +L++ +N L+ +CG +++N SKT +V F +P ++ N ++ NEY+YLG AA ++A A+ A+ S + L ++++Y + V S LLY A VWGL L+KL++ HL KR+L
Sbjct: 1 MFGLFVDFKRAFDSVPHVLLWNKLFKAGISPKIFRILKILYDQAICQIRSGGMLSEKFEVTEGVLQGEILSPLLFILYLYDIVKYFREKKAKSIQINSNYDMIMLLYADDLVILSDSILNLRKNVNILEEYCGTHKLNINFSKTKIVHFKRGDPNEKTKIYCGNNLIEWTNEYEYLGVPITGSALGLSAANAACRKARLATGAAL-SSLAGLKARSWDGMLKIYKSCVQSSLLYAAPVWGL----RYLEKLKQTHLMFFKRLL 258
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: UPI001E1D5B82 (uncharacterized protein LOC123545968 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5B82) HSP 1 Score: 153 bits (386), Expect = 1.460e-38 Identity = 86/240 (35.83%), Postives = 138/240 (57.50%), Query Frame = 1
Query: 4 FCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKFSHKGGNWRCAGRDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFV--NKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWG 717
F AF+DFRKAYD + S LWNRL + G+ K++ +KS+Y+ V S+R + +FD G+RQGC+LSPL+FNL+I F G +L+ LLYADD+VL+A+ AA LQ+LLN+L +C ++ M++ +SK+ ++ F + + VF N L++V+ Y+YLG L ++A Q A++A + + + + + +LY T+V V+ Y + +WG
Sbjct: 317 FAAFIDFRKAYDFINRSKLWNRLCNTGINGKMLSAIKSLYSTVSASIRVNCFSTEWFDVKSGLRQGCILSPLLFNLYINDLAVFLKSLDIGVKIGDELLCI-LLYADDIVLLAENAADLQKLLNALRDWCNLNDMNIYVSKSKIIHFRPPS-CSRTNQVFTCGNDTLEIVDRYRYLGLLMHEHLDLNVMVKAVAQSASRA-LGLVIAKCKVMGGVPYDVFTKLYDTVVWPVISYGSAIWG 553
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A5J4XXJ8_9CHLO (Endonuclease-reverse transcriptase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XXJ8_9CHLO) HSP 1 Score: 149 bits (377), Expect = 1.300e-37 Identity = 90/240 (37.50%), Postives = 138/240 (57.50%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKFSHKGGNWRCAG-RDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWG 717
++C FVDFRKA+DTV ++LW L LG+ ++++++KS+YA +VR +S+ F L+GV+QGC LSP +F L++ K + + +++ LLYADD++L+++ A+ LQ+ L++L SFC ++VN+SKT VV F ++ D FV ++ V YKYLG F F +A + A KA FA L T+L +L+ TLVL +L Y EVWG
Sbjct: 74 LYCCFVDFRKAFDTVPRAVLWQVLEELGVHGRILDIIKSLYAHDSAAVRSSQGISAIFRCLMGVKQGCPLSPTLFGLYVDGLEKHLLETADIDAPTLMGVMVPLLLYADDLILMSESASGLQKQLDALASFCEQRQLTVNLSKTKVVVFETRQS-DMCDFVLSGAVVERVESYKYLGFVFHATKKLTFGTDALVATAKKALFA-MRRRCALLGIRDTALQCKLFDTLVLPILSYGCEVWG 311
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A354GGU0_9FLAO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A354GGU0_9FLAO) HSP 1 Score: 148 bits (374), Expect = 1.490e-37 Identity = 93/278 (33.45%), Postives = 153/278 (55.04%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKF---SHKGGNW------RCAGRDLI-----IFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRILKV 792
++CAF+D+ KA+D + S LW +LL +G+ K++ ++ ++Y K VR NLS FF VGVRQG LSPL+F +++ + F ++G + R G D+ ++ LLYADD +++A+ LQ LNS+ +C +++ +N++KT V+ F + F + +Q++VV++Y YLG + SF IE + +A KA F S + L L L + L+ V+ +LLY EVWG ++ ++E F+ LK +LKV
Sbjct: 59 LYCAFIDYSKAFDLINRSTLWIKLLGIGVKGKIINVIYNLYDSAKSCVRKCNNLSDFFHCNVGVRQGENLSPLLFAIYLNDFESFVAQEYEGLTFLSSEASRLLGDDVFEMYLRLYILLYADDTIVLAESPNQLQAALNSVQRYCEKNSLKLNLTKTKVIVFSRGKIRNIPKFWYGEEQVEVVDDYIYLGVKINYNGSFTKAIEKQIDQARKAMF-SLITKARRL-QLPVDLQIELFDKTVVPILLYGCEVWGC----SNISEIEVFYRKFLKIVLKV 330
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A3C1S4H7_9FLAO (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A3C1S4H7_9FLAO) HSP 1 Score: 148 bits (374), Expect = 6.770e-37 Identity = 93/278 (33.45%), Postives = 153/278 (55.04%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKF---SHKGGNW------RCAGRDLI-----IFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRILKV 792
++CAF+D+ KA+D + S LW +LL +G+ K++ ++ ++Y K VR NLS FF VGVRQG LSPL+F +++ + F ++G + R G D+ ++ LLYADD +++A+ LQ LNS+ +C +++ +N++KT V+ F + F + +Q++VV++Y YLG + SF IE + +A KA F S + L L L + L+ V+ +LLY EVWG ++ ++E F+ LK +LKV
Sbjct: 478 LYCAFIDYSKAFDLINRSTLWIKLLGIGVKGKIINVIYNLYDSAKSCVRKCNNLSDFFHCNVGVRQGENLSPLLFAIYLNDFESFVAQEYEGLTFLSSEASRLLGDDVFEMYLRLYILLYADDTIVLAESPNQLQAALNSVQRYCEKNSLKLNLTKTKVIVFSRGKIRNIPKFWYGEEQVEVVDDYIYLGVKINYNGSFTKAIEKQIDQARKAMF-SLITKARRL-QLPVDLQIELFDKTVVPILLYGCEVWGC----SNISEIEVFYRKFLKIVLKV 749
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A354GHD9_9FLAO (Reverse transcriptase domain-containing protein n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A354GHD9_9FLAO) HSP 1 Score: 148 bits (374), Expect = 7.240e-37 Identity = 91/278 (32.73%), Postives = 155/278 (55.76%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKF---SHKGGNW------RCAGRDLI-----IFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLDEFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLSCLKRILKV 792
++CAF+D+ KA+D + S LW ++L+LG+ ++ ++ ++Y+K K V++G +LS F+ VGVRQG LSPL+F +++ + + ++G + R G + + ++ LLYADD +++A+ LQ LNS+ +C + + +N++KT ++ F + F + N+Q++VV +Y YLG F+ SF +E +A KA F S + L L + + L+ VL VLLY EVWG ++ +E F+ LK ILKV
Sbjct: 659 LYCAFIDYSKAFDLIDRSTLWMKVLNLGIRGNIINVIFNLYSKAKSCVKNGNDLSQLFNCNVGVRQGENLSPLLFAIYLNDFALYVSQEYEGLAFVSEETSRLLGDEAVDMFLRLYILLYADDTIVLAESPLQLQHALNSVKDYCDKNYLKLNLTKTKIIVFSRGKIRNIPKFFYGNEQVEVVKDYVYLGVKFNYNGSFTKAMEKQTDQARKAMF-SMLTKARRL-QLPVDIQIELFEKTVLPVLLYGCEVWGC----ANIDAIEVFYRKFLKIILKV 930
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Match: A0A023F6P3_TRIIF (Putative endonuclease-reverse transcriptase (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023F6P3_TRIIF) HSP 1 Score: 147 bits (370), Expect = 8.170e-37 Identity = 88/257 (34.24%), Postives = 152/257 (59.14%), Query Frame = 1
Query: 1 VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHGTNLSSFFDYLVGVRQGCVLSPLVFNLFIVSWLKFSHKGGNWRCAGRDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDSFCGVSAMSVNISKTMVVPFFSKNPLD-EFSFVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFASFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNAEVWGLLILKGSLKKLEKFHLS 768
V+C FVDF A+D V S L+ +LL+LG+ K V +L+++Y + C+VR G +S FF GVRQGC+LSP++F++F+ L +GG R A D ++ L+YADD+V++ + LQR +N L+S+C + VN+ K+ +V F L + + + +++++VVN YKYLG LSF HI+ + AAK + S + + + + S ++++++ ++ Y A++WG + +L+KL +F +
Sbjct: 122 VYCFFVDFSAAFDRVNRSALFLKLLNLGVSSKFVTILRALYRETLCAVRGGNGISEFFSVASGVRQGCLLSPILFSVFVDD-LPGLLEGGV-RVA--DTVVKILMYADDIVILDENPLQLQRNINILESYCQHWGLEVNLKKSQIVVFRKGGRLSGKEKWRYGDQEIEVVNNYKYLGVTMTPRLSFDTHIKEKVS-AAKLALNSVWMGVISTKMVPLSHKYQIFNSVCRAIACYAAQIWGFQRYE-ALEKLLRFFIK 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1138.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1138.2.1 >prot_H-akashiwo_Contig1138.2.1 ID=prot_H-akashiwo_Contig1138.2.1|Name=mRNA_H-akashiwo_Contig1138.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=264bp VFCAFVDFRKAYDTVRHSILWNRLLSLGMGPKLVELLKSIYAKVKCSVRHback to top mRNA from alignment at H-akashiwo_Contig1138:238019..238810+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1138.2.1 ID=mRNA_H-akashiwo_Contig1138.2.1|Name=mRNA_H-akashiwo_Contig1138.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=792bp|location=Sequence derived from alignment at H-akashiwo_Contig1138:238019..238810+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1138:238019..238810+ >mRNA_H-akashiwo_Contig1138.2.1 ID=mRNA_H-akashiwo_Contig1138.2.1|Name=mRNA_H-akashiwo_Contig1138.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=792bp|location=Sequence derived from alignment at H-akashiwo_Contig1138:238019..238810+ (Heterosigma akashiwo CCMP452)back to top |