mRNA_H-akashiwo_Contig1136.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 159 bits (403), Expect = 6.180e-44 Identity = 81/100 (81.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 4 VSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFRH 303
VSKVL+ LDV KSVGPDGVSPRVLK CA QL PLTRLFQK+G FP SWKVARVTPVYKK+DASLP+NYRPISVLPTLATTFERVLM QL+SFL H
Sbjct: 316 VSKVLRSLDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVYKKEDASLPKNYRPISVLPTLATTFERVLMPQLASFLIEH 415
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 156 bits (395), Expect = 2.400e-42 Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 4 VSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFRH 303
VSKVL+ LDV KSVGPDGVSPRVLK CA QL PLTRLFQK+G FP SWKVARVTPV+KK+DA+LP+NYRPISVLPTLATTFERVLM QL+SFL H
Sbjct: 316 VSKVLRSLDVNKSVGPDGVSPRVLKDCAGQLVAPLTRLFQKIGKAAEFPTSWKVARVTPVHKKEDANLPKNYRPISVLPTLATTFERVLMPQLASFLIEH 415
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A8B6DA78_MYTGA (Reverse transcriptase domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DA78_MYTGA) HSP 1 Score: 92.8 bits (229), Expect = 2.020e-20 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 1 EVSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFRH 303
EV L LLDV K+ GPD +S R+LK+ AR+L+RPL +LF K V+P +WK+ V PV+K D L NYRPIS+L + + ER + K +FL +H
Sbjct: 125 EVFDHLSLLDVTKATGPDEISGRLLKYAARELSRPLAQLFNKSIREAVYPETWKLESVIPVFKSCDRELVSNYRPISLLSIIGKSMERCVFKHFFNFLTKH 225
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A091RXI1_9GRUI (Uncharacterized protein (Fragment) n=1 Tax=Mesitornis unicolor TaxID=54374 RepID=A0A091RXI1_9GRUI) HSP 1 Score: 86.3 bits (212), Expect = 7.600e-20 Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 4 VSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFL 294
VS +L LD+ KS+GPDG+ PR+LK A LA+PL ++Q+ + G P W++A VTP+YKK P NYRP+S+ T E++++ ++ +L
Sbjct: 6 VSDLLHHLDIHKSIGPDGLHPRMLKELAEVLAKPLFIIYQQSWLTGEVPVDWRLANVTPIYKKGRKEDPGNYRPVSLTSVPGKTMEQIILSTITHYL 102
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: UPI0012D451D1 (uncharacterized protein LOC116346514 n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D451D1) HSP 1 Score: 87.0 bits (214), Expect = 1.610e-19 Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 EVSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSF 291
+V K LQ +++ K GPDG+SP++LK+CA+ LA PLT LF+K G P K +R+ P++K + NYRP+ ++PT+A FE V+ ++++F
Sbjct: 60 DVLKALQSINMNKGAGPDGISPKLLKNCAKSLATPLTVLFRKSLHQGCVPDVLKKSRIVPIFKSGKKNSASNYRPVVIIPTIAKIFEMVVYGKINTF 156
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A093J4Z1_FULGA (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Fulmarus glacialis TaxID=30455 RepID=A0A093J4Z1_FULGA) HSP 1 Score: 84.0 bits (206), Expect = 6.690e-19 Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 4 VSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSS 288
V+ +L D +S+GPDG+ PRVL+ A++LA+PL+ ++Q+ + G P W++A V+P+YKK P NYRP+S+ L ER +++ L+S
Sbjct: 9 VNNLLGHPDTHRSMGPDGIHPRVLRELAKELAKPLSIIYQQSWLTGDVPDDWRLANVSPIYKKGQKEDPGNYRPVSLTSVLGNIMERFVLRALTS 103
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A2H9T5P0_9ZZZZ (Reverse transcriptase domain-containing protein n=1 Tax=invertebrate metagenome TaxID=1711999 RepID=A0A2H9T5P0_9ZZZZ) HSP 1 Score: 89.7 bits (221), Expect = 9.180e-19 Identity = 42/101 (41.58%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 1 EVSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFLFRH 303
EV ++++LDV+K+ GPDG+S R+L+ + +++ PL+ +F +FP SWK+A V P++K DAS+ NYRPIS+L + FERV+ K + FL +
Sbjct: 525 EVEDIIKILDVKKASGPDGISHRMLQLLSSEISIPLSFIFNYSLSSCIFPESWKIAHVMPIFKANDASIVSNYRPISLLSCIGKLFERVVYKHIYIFLIEN 625
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL) HSP 1 Score: 89.7 bits (221), Expect = 9.250e-19 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 1 EVSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVL 270
+V ++L +DV K+ GPD VSPR+LKHCAR+L+ PLT +F +P WK ARV PV+KK S P NYRPIS+L + E+++
Sbjct: 369 QVERLLGAVDVGKATGPDDVSPRLLKHCARELSAPLTTVFTSCLREKKWPSVWKEARVVPVHKKNSRSEPNNYRPISLLSVMGKLLEKIV 458
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A091U0C0_PHORB (Uncharacterized protein (Fragment) n=1 Tax=Phoenicopterus ruber ruber TaxID=9218 RepID=A0A091U0C0_PHORB) HSP 1 Score: 83.6 bits (205), Expect = 1.140e-18 Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 4 VSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMK 276
VS +L+ LD+ KS+GPDG+ PRVLK A L +PL+ ++Q+ + G P W++A VTP+YKK P NYRP+S+ E+V+++
Sbjct: 16 VSDLLRHLDMHKSMGPDGIHPRVLKELAEVLIKPLSIIYQQSWLTGEVPVDWRLANVTPIYKKGQKEDPGNYRPVSLTSVPRKVMEQVILR 106
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Match: A0A8K1G244_9PASS (Uncharacterized protein n=1 Tax=Zosterops borbonicus TaxID=364589 RepID=A0A8K1G244_9PASS) HSP 1 Score: 86.7 bits (213), Expect = 1.170e-18 Identity = 38/97 (39.18%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 4 VSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPRSWKVARVTPVYKKKDASLPENYRPISVLPTLATTFERVLMKQLSSFL 294
V ++L LD+ KS+GPDG+ PRV++ A +LA+PL+ ++Q+ + G P WK+A VTP++KK P NYRP+S+ P E+ ++ ++ L
Sbjct: 30 VRELLSCLDIHKSMGPDGIHPRVMRELADELAKPLSIIYQQSWLTGEVPDDWKLANVTPIHKKSGKDDPSNYRPVSLTPVPGKVMEQFILSVITQHL 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1136.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1136.1.1 >prot_H-akashiwo_Contig1136.1.1 ID=prot_H-akashiwo_Contig1136.1.1|Name=mRNA_H-akashiwo_Contig1136.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=101bp EVSKVLQLLDVRKSVGPDGVSPRVLKHCARQLARPLTRLFQKVGIPGVFPback to top mRNA from alignment at H-akashiwo_Contig1136:18047..18349+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1136.1.1 ID=mRNA_H-akashiwo_Contig1136.1.1|Name=mRNA_H-akashiwo_Contig1136.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=303bp|location=Sequence derived from alignment at H-akashiwo_Contig1136:18047..18349+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1136:18047..18349+ >mRNA_H-akashiwo_Contig1136.1.1 ID=mRNA_H-akashiwo_Contig1136.1.1|Name=mRNA_H-akashiwo_Contig1136.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=303bp|location=Sequence derived from alignment at H-akashiwo_Contig1136:18047..18349+ (Heterosigma akashiwo CCMP452)back to top |