mRNA_H-akashiwo_Contig1134.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 244 bits (623), Expect = 4.730e-71 Identity = 119/187 (63.64%), Postives = 148/187 (79.14%), Query Frame = 1
Query: 34 RGLEVNDR--AAFTLSQGFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNEGLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLE 588
RG + DR A +GFL +D YAS+R+DRLAED +A+ RKL+GLL VTP EAEP SPEA RRL++FVN+LFMD+PKAPP+ DM SWT MTPFYSEDV+L++ DLE RN +GLTV+ YLQ LY DW NFLER I+DE +++SK+Y+ ETRLWAS+R+QTL RT EGMM+ ++ALRLLG LE
Sbjct: 679 RGRDFVDRLSAVTGKQEGFLCNDLYASSRMDRLAEDAKFMAILRKLYGLLAVTPNEAEPHSPEAQRRLSFFVNSLFMDVPKAPPVADMLSWTVMTPFYSEDVILTRADLERRNEDGLTVMMYLQTLYASDWKNFLERLGIKDEQRVFSKKYIHETRLWASLRSQTLFRTVEGMMYQQQALRLLGNLE 865
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 236 bits (602), Expect = 3.170e-68 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 1
Query: 46 VNDRAAFTLS--QGFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNEGLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLE 588
V D +F LS QGF+WDD YA+ARLDRL+E L ++ KL+GLL + +AEP+SPEA RRLT+FVN+LFMD+P+AP L +M SW+ +TP+YSEDVL + DLE RN +GL++L YLQALYK DW NFLERN I DE +I+SK++ QE RLWAS+RAQTL+RT EGMM+YE ALRLL LE
Sbjct: 937 VQDLLSFVLSMEQGFMWDDAYATARLDRLSEHALTKSILSKLYGLLAIQAGDAEPASPEARRRLTFFVNSLFMDMPRAPQLANMLSWSCVTPYYSEDVLYGRKDLEKRNEDGLSMLMYLQALYKHDWHNFLERNGISDEQQIWSKKHFQELRLWASMRAQTLSRTVEGMMYYEAALRLLALLE 1119
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 229 bits (585), Expect = 6.190e-66 Identity = 113/196 (57.65%), Postives = 146/196 (74.49%), Query Frame = 1
Query: 22 GAGARGLEVNDRAAFTLSQ--GFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNEGLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLE-VREE 600
GA RG E++ + + +Q GF+WDD YAS RLDR+A+D L++ KL GLL + +AEP S EA RRL +F N+LFMD+P+APP++DM SW+ MTPFYSEDV+ S+GDL+ +N +GLT L YLQALYK DW NF+ER I E + SK++++ TRLWAS RAQTLART EG+M+YE ALRLL LE V+EE
Sbjct: 1164 GADERGTEISVKLSSMANQSTGFMWDDAYASQRLDRMAQDKTTLSILEKLHGLLGIDRNDAEPHSVEARRRLAFFTNSLFMDMPRAPPVQDMMSWSCMTPFYSEDVVYSRGDLDQKNEDGLTTLMYLQALYKHDWRNFMERRGITSEQQAMSKKHIEATRLWASFRAQTLARTVEGIMYYEAALRLLARLERVKEE 1359
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: D7FY26_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY26_ECTSI) HSP 1 Score: 228 bits (581), Expect = 2.020e-65 Identity = 111/196 (56.63%), Postives = 146/196 (74.49%), Query Frame = 1
Query: 22 GAGARGLEVNDRAAFTLSQ--GFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNEGLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLE-VREE 600
G+ RG E++ + + +Q GF+WDD YAS RLDR+A+D L++ KL GLL + +AEP S EA RRL +F N+LFMD+P+APP++DM SW+ MTPFYSEDV+ S+GDL+ +N +GLT L YLQALYK DW NF+ER I E + SK++++ TRLWAS RAQTLART EG+M+YE ALRLL LE ++EE
Sbjct: 1055 GSDERGTEISVKLSSMANQSTGFMWDDAYASQRLDRMAQDKTTLSILEKLHGLLGIDRNDAEPHSVEARRRLAFFANSLFMDMPRAPPVQDMMSWSCMTPFYSEDVVYSRGDLDQKNEDGLTTLMYLQALYKHDWRNFMERKGITSEQQAMSKKHIEATRLWASFRAQTLARTVEGIMYYEAALRLLARLERIKEE 1250
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A7S3LFK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFK8_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.240e-62 Identity = 101/185 (54.59%), Postives = 133/185 (71.89%), Query Frame = 1
Query: 43 EVNDRAAF--TLSQGFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNE-GLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLE 588
++ DR F ++ GF WDD YAS +LD ++++ AV +K+ GL+ + P E EP S E RRLT+FVN+LFMD+P AP + DM SW +TP+YSEDV SK DLE R++ G++ L YLQ LYK DW NFLER I+DE K+++K+Y+ ETR WAS+RAQTL+RT GMM+ EKALRLL LE
Sbjct: 72 DMLDRLTFMASMENGFFWDDAYASDQLDDVSKNHTFKAVLKKIHGLMCMHPDEVEPKSKEVRRRLTFFVNSLFMDMPDAPSIHDMFSWNVLTPYYSEDVTYSKADLERRSDALGVSTLLYLQTLYKPDWHNFLERLGIKDEDKVWAKKYVDETRRWASIRAQTLSRTVNGMMYCEKALRLLANLE 256
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A7S2JUC2_9STRA (Hypothetical protein n=3 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUC2_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.030e-61 Identity = 109/191 (57.07%), Postives = 139/191 (72.77%), Query Frame = 1
Query: 43 EVNDRAAFTLSQ--GFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLE-VRNNEGLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLEVREERT 606
+V DR F LS GF+WDD YAS +LD+L++D L V K+ GL+ P + EP S EA RRLT+FVN+LFMD+P AP ++DM S+ MTPFYSEDV+ SKGDLE ++ G++ L YLQ LY DW NFLER I D+ K++S +YLQETR+WAS+RAQTL+RT GMM+YEKA+RLL LE +E T
Sbjct: 528 DVLDRITFMLSMENGFMWDDAYASEQLDKLSKDDLVTKVLTKVNGLINYYPDDVEPKSKEAKRRLTFFVNSLFMDIPDAPRIQDMFSFNVMTPFYSEDVIYSKGDLEKTKDALGVSTLLYLQTLYGSDWKNFLERQGINDDNKVFSPKYLQETRMWASLRAQTLSRTVNGMMYYEKAIRLLANLERLDEDT 718
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A1Z5JIZ9_FISSO (1,3-beta-glucan synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIZ9_FISSO) HSP 1 Score: 213 bits (542), Expect = 3.680e-60 Identity = 104/193 (53.89%), Postives = 138/193 (71.50%), Query Frame = 1
Query: 37 GLEVNDRAAF--TLSQGFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNE-GLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLEVREERT 606
G +V DR F ++ GF WDDYYAS++LD ++++ V +KL+GL+ + P +AEP S EA RRLT+FVN+LFMD+P AP + DM SW +TPFYSEDVL SK DLE R + G++ L YLQ LY+ DW NFLER +++E K++ +Y+ ETR WAS+RAQTL RT GMM+ EKALRLL LE ++ T
Sbjct: 1127 GRDVLDRLTFLGSMENGFFWDDYYASSQLDDISKNETFKGVLKKLYGLVCMHPDDAEPKSKEARRRLTFFVNSLFMDMPDAPSIHDMFSWNVLTPFYSEDVLYSKADLERRTDALGVSTLLYLQTLYRSDWNNFLERLGVKEEEKVWQPKYIDETRRWASIRAQTLTRTVTGMMYCEKALRLLANLERIDDHT 1319
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 209 bits (533), Expect = 5.980e-59 Identity = 105/193 (54.40%), Postives = 135/193 (69.95%), Query Frame = 1
Query: 37 GLEVNDRAAFTLSQ--GFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNE-GLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLEVREERT 606
G E++DR F LS GF+W+D YAS +LD ++++ + V K+ GL+ P + EP S EA RRLT+FVN+LFMD+P AP + DM+SW MTPFYSEDV +KGDL + G++VL YLQ LYK DW NF+ER KI DE++I+ KQY E R WAS+RAQTL+RT GMM EKALRLL LE ++ T
Sbjct: 1122 GREISDRLTFLLSMENGFIWNDTYASGQLDLVSKNKVFCEVLNKVNGLINAHPDDVEPKSKEAKRRLTFFVNSLFMDIPNAPSMTDMQSWNVMTPFYSEDVTYNKGDLMKKEKTLGVSVLLYLQTLYKADWTNFVERMKIADESRIWDKQYSTEVRRWASIRAQTLSRTVSGMMLNEKALRLLAKLEGHDKET 1314
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: K0RK06_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RK06_THAOC) HSP 1 Score: 208 bits (529), Expect = 1.960e-58 Identity = 104/191 (54.45%), Postives = 130/191 (68.06%), Query Frame = 1
Query: 43 EVNDRAAFTLSQ--GFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNE-GLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLEVREERT 606
+V DR F LS GF WDD YAS LD A + +V KL GL+ P E EP S EA RRLT+FVN+LFMD+P AP + DM SW +TP+Y E V LSKG+LE R + G++ + YLQ L+K DW NFLER ++DE K+++K+Y ETR WAS+RAQTL RT GMM+YEKALRLL +E +E T
Sbjct: 310 DVMDRLTFALSMENGFFWDDAYASDALDDFARSGIVKSVLTKLKGLVACHPDEVEPKSKEARRRLTFFVNSLFMDMPNAPSIHDMFSWNVLTPYYKESVTLSKGELETRKDALGVSTMLYLQTLFKADWANFLERLGLQDEEKVWNKKYAAETRQWASIRAQTLNRTVSGMMYYEKALRLLANMERLDEDT 500
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Match: B7FQP6_PHATC (1,3-beta-glucan synthase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQP6_PHATC) HSP 1 Score: 207 bits (528), Expect = 2.810e-58 Identity = 104/191 (54.45%), Postives = 136/191 (71.20%), Query Frame = 1
Query: 43 EVNDRAAF--TLSQGFLWDDYYASARLDRLAEDPLALAVTRKLFGLLVVTPQEAEPSSPEAHRRLTYFVNTLFMDLPKAPPLEDMRSWTTMTPFYSEDVLLSKGDLEVRNNE-GLTVLTYLQALYKQDWLNFLERNKIEDEAKIYSKQYLQETRLWASVRAQTLARTCEGMMFYEKALRLLGTLEVREERT 606
+V DR F ++ GF WDD YAS +LD +++ AV +K+ GL+ + P +AEP S E RRLT+FVN+LFMD+P AP + DM SW +TP+YSEDV SK DLE R++ G++ L YLQ LY+ DW NFLER I+DE K++SK+Y+ ETR WAS+RAQTL+RT GMM+ EKALRLL LE +E T
Sbjct: 1111 DVLDRLTFLGSMENGFFWDDSYASEQLDVASKNETFKAVLKKMHGLVCMHPDDAEPKSKEVRRRLTFFVNSLFMDMPNAPSIHDMFSWNVLTPYYSEDVTYSKDDLEKRSDALGVSTLLYLQTLYRSDWNNFLERLGIKDEDKVWSKKYVNETRRWASIRAQTLSRTVNGMMYCEKALRLLANLERLDEDT 1301 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1134.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1134.2.1 >prot_H-akashiwo_Contig1134.2.1 ID=prot_H-akashiwo_Contig1134.2.1|Name=mRNA_H-akashiwo_Contig1134.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=210bp RDLAGGAGAGARGLEVNDRAAFTLSQGFLWDDYYASARLDRLAEDPLALAback to top mRNA from alignment at H-akashiwo_Contig1134:49189..51354+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1134.2.1 ID=mRNA_H-akashiwo_Contig1134.2.1|Name=mRNA_H-akashiwo_Contig1134.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2166bp|location=Sequence derived from alignment at H-akashiwo_Contig1134:49189..51354+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1134:49189..51354+ >mRNA_H-akashiwo_Contig1134.2.1 ID=mRNA_H-akashiwo_Contig1134.2.1|Name=mRNA_H-akashiwo_Contig1134.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=630bp|location=Sequence derived from alignment at H-akashiwo_Contig1134:49189..51354+ (Heterosigma akashiwo CCMP452)back to top |