mRNA_H-akashiwo_Contig1131.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A836CLB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB2_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.430e-51 Identity = 84/161 (52.17%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 4 MSQRYKRVQNVEDDSPNPRSDREEAKKKRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIPPLPC 486
MSQRY RV + S S+ EE K++R++L + I+ K+HA FW AG V+YYTDF+RV+L+ D V R +FNL CF +NC M YLT++LP +++++ WNIYCPR IP T G+ CG+ L + +W VWGFLTPLIL VVFMG F LHF+P PC
Sbjct: 1 MSQRYSRVPTRDVKSTTETSE-EERKRRRTELAERISNKLHAAFWTIVAGVVVYYTDFVRVLLQDDRVKRPWFNLATACFAVNCVIMGYLTLWLPLVQRVSTPWNIYCPRAIPAATAVGVICGVSLNLALWSVWGFLTPLILLVVFMGCLFFLHFVP-WPC 159
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: D8LGK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK7_ECTSI) HSP 1 Score: 171 bits (434), Expect = 8.190e-51 Identity = 84/161 (52.17%), Postives = 114/161 (70.81%), Query Frame = 1
Query: 4 MSQRYKRVQNVEDDSPNPRSDREEAKKKRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIPPLPC 486
MS RY RV D +P ++ E++K++RS L D I+ K+HA FW AV+Y TDF+RV++E + V+RL+FN+G+VCF +N + YLTV+LP+++ I +SWN+Y PR IPT T+ GL C L L M +W VWGFLTPLIL VF+G FSLHF+P PC
Sbjct: 82 MSLRYSRV--TSGDGGSPATEAEQSKRRRSQLADRISNKLHAFFWVVVGVAVVYRTDFVRVLVEDERVDRLWFNIGLVCFSVNAVILAYLTVWLPHVRGIRVSWNVYSPRAIPTATVVGLICALALNMSLWNVWGFLTPLILFAVFIGCLFSLHFVP-WPC 239
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A024UNE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE8_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.210e-47 Identity = 80/165 (48.48%), Postives = 105/165 (63.64%), Query Frame = 1
Query: 16 YKRVQNVED-DSP-----NPRSDREEAKK----KRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIPPL 480
Y+R+ +D DSP N ++ EE KK K + I+ KIHA W GAG ++YY D + V V+R+YFNLG+VCFGIN C YL ++LPY+KKI L WN+YCPR++PT TI G+ C L MG+WPVWGF TP IL V+F+G + HF+P L
Sbjct: 13 YQRLPLADDGDSPASVDANAETEIEELKKRAQGKPPSRAEVISTKIHAFLWIVGAGFLLYYLDVMHVAFRDSRVHRVYFNLGLVCFGINTCITLYLAIWLPYVKKIDLEWNVYCPRMVPTATIVGVVCALMFTMGLWPVWGFFTPGILFVLFLGALMTAHFLPAL 177
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A8J2SGJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGJ0_9STRA) HSP 1 Score: 159 bits (401), Expect = 7.040e-47 Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 10 QRYKRVQNVEDDSPNPRSDREEAKKKRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIPPLPC 486
QRY RV ED + + R AKK+RS+L + + KI A W A G V Y TD V+L E NR + ++ CF NC FYLTV+LP++++I L WN+YCPRVIPTMT+ GL CG LI G+WPVWG LTPLILG+V M SLHFIP +PC
Sbjct: 6 QRYSRVP-TEDAA----TTRAAAKKRRSELAEQVATKIQAAAWVAAGGFVAYQTDLPVVLLAGTETNRFWCDVAAACFAANCVLCFYLTVWLPHVQRIDLEWNVYCPRVIPTMTVLGLTCGFSLIRGLWPVWGLLTPLILGLVAMACLMSLHFIP-IPC 158
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: W4FWN3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN3_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.700e-46 Identity = 66/133 (49.62%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 76 AKKKRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIP 474
A+ K + ++ KIHAL W GAG ++YY D +RV V+R+YFN+G+VCFGIN C YL+++LPY+KKI L W++YCPR++PT T+ G+ C L +G+WPVWGF TP IL V+F+G + HF+P
Sbjct: 45 AQGKPPSRAEVVSTKIHALMWIVGAGFLLYYLDVLRVAFRDARVHRVYFNIGLVCFGINACITLYLSIWLPYVKKIDLEWSVYCPRMVPTATVVGIVCALMFTVGLWPVWGFFTPGILFVLFLGTLMTAHFLP 177
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A6G0XCK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCK9_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.090e-46 Identity = 72/149 (48.32%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 28 QNVEDDSPNPRSDREEAKKKRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIP 474
+NVE++ + +E R++ + T KIHA+ W GA ++ Y+ D RV V+R+YFN+G+VCFGINCC YL V+LPY+KKI L W++YCPR+IPT T+ GL C L L +G+WPVWGF TP IL V+F+G + HF+P
Sbjct: 25 ENVENEIEELKKRMQEKSVSRAEWVST---KIHAVLWIVGAASLAYFLDVFRVAFRDARVHRIYFNIGLVCFGINCCITMYLAVWLPYVKKIDLEWSVYCPRMIPTATVVGLLCALMLTIGLWPVWGFFTPGILFVLFLGALMTAHFLP 170
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A485KKF8_9STRA (Aste57867_8441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKF8_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.030e-45 Identity = 79/169 (46.75%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 1 TMSQRYKRVQNVEDDS-------PNPRSDREEAKK----KRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIP 474
T S Y RV ++D+ PN + EE KK K + I+ K+HAL W GAG+++Y D RV V+R+YFN+G+VCFGINCC YL V+LPYIKKI L W++YCPR++PT T GL C L +G+WPVWG TP IL V+F+G + HF+P
Sbjct: 7 TRSSSYHRVSQTDEDASSAVSVEPNVDVEIEELKKRVQGKPPTRAEWISTKLHALLWVLGAGSLVYTLDVFRVAFRDARVHRVYFNIGLVCFGINCCITLYLAVWLPYIKKIDLEWSVYCPRMVPTATAVGLLCALTFTIGLWPVWGLFTPGILFVLFLGSLMTAHFLP 175
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A1W0A176_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A176_9STRA) HSP 1 Score: 154 bits (388), Expect = 8.190e-45 Identity = 73/161 (45.34%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 1 TMSQRYKRVQN---VEDDSPNPRSDREEAKKKRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIP 474
T S Y+R+Q +EDD ++ + K + ++ K+HA W A A+ Y D + V V+RLYFN+G+VCFG+NCC YL V+LPY+KKI L W++YCPR+IPT TI G+ C L I+G+WPVWGF TP IL V+F+G + HF+P
Sbjct: 3 TRSSSYQRLQEEIVLEDDDQEIEQLKKRTQPKPPSKAEYVSTKLHAALWIGSAVALAYCLDVLNVAFHDPRVHRLYFNIGLVCFGMNCCITLYLAVWLPYVKKIDLEWSVYCPRMIPTATIIGILCALGFILGLWPVWGFFTPGILFVLFLGSLMTAHFLP 163
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A1V9ZHJ8_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHJ8_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.690e-42 Identity = 64/124 (51.61%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 109 INAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIPPL 480
++ K+HA W AG V Y+ D V V+RL FN+G+VCFGINCC YL ++LPY+KKI L W++YCPR+IPT T+ GL C L I G+WP+WGF TP IL V+F+G + HF+P L
Sbjct: 49 LSTKLHAALWVVCAGLVAYFLDVFNVAFGDPRVHRLSFNVGLVCFGINCCITAYLAIWLPYVKKIDLEWSVYCPRMIPTATVAGLGCALGFIFGLWPIWGFFTPGILFVLFLGTLMTAHFLPAL 172
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Match: A0A067CEE4_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEE4_SAPPC) HSP 1 Score: 142 bits (359), Expect = 2.350e-40 Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 85 KRSDLIDTINAKIHALFWCAGAGAVMYYTDFIRVMLESDEVNRLYFNLGVVCFGINCCFMFYLTVYLPYIKKITLSWNIYCPRVIPTMTITGLACGLFLIMGMWPVWGFLTPLILGVVFMGMFFSLHFIP 474
K + ++ K+HAL W GA + YY D + + L V+RLYFN+GVVC G+N C YL ++LPY++K+ L W++YCPR+IPT TI GL L LI+G+WPVWG TP IL V+F+G + HF+P
Sbjct: 39 KAPSKAEWLSTKLHALLWVGGACLLAYYLDVVHIALRDVRVHRLYFNIGVVCAGVNGCITAYLALWLPYVRKVDLEWSVYCPRMIPTATIVGLVGALGLILGLWPVWGLFTPGILFVLFLGTLMTAHFLP 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1131.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1131.6.1 >prot_H-akashiwo_Contig1131.6.1 ID=prot_H-akashiwo_Contig1131.6.1|Name=mRNA_H-akashiwo_Contig1131.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=162bp MSQRYKRVQNVEDDSPNPRSDREEAKKKRSDLIDTINAKIHALFWCAGAGback to top mRNA from alignment at H-akashiwo_Contig1131:85789..86277- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1131.6.1 ID=mRNA_H-akashiwo_Contig1131.6.1|Name=mRNA_H-akashiwo_Contig1131.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig1131:85789..86277- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1131:85789..86277- >mRNA_H-akashiwo_Contig1131.6.1 ID=mRNA_H-akashiwo_Contig1131.6.1|Name=mRNA_H-akashiwo_Contig1131.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=486bp|location=Sequence derived from alignment at H-akashiwo_Contig1131:85789..86277- (Heterosigma akashiwo CCMP452)back to top |