mRNA_H-akashiwo_Contig1129.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1129.2.1
Unique NamemRNA_H-akashiwo_Contig1129.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK)

HSP 1 Score: 256 bits (654), Expect = 9.500e-86
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
Query:    1 KFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAACLENFKGSMCVKLHESHKAWASYTGDV 369
            KFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAACLENFKGSMCVKLHESHKAWASYTGDV
Sbjct:   28 KFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAACLENFKGSMCVKLHESHKAWASYTGDV 150          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.630e-60
Identity = 93/119 (78.15%), Postives = 105/119 (88.24%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAACLEN-FKGSMCVKLHESHKAWASY 357
            ++LGV+DSIMIAHSF+GEEFGPAQ++HGATYTVDVEF A+ L  KCNWV+DIG ASEIL  VL KYNFKNL+ELFPDDNTTTEFMCK IFDD++A L N FKGS+ VKL ESHKAWASY
Sbjct:   30 YTLGVKDSIMIAHSFQGEEFGPAQKLHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKVIFDDMSAELANKFKGSLSVKLWESHKAWASY 148          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.820e-58
Identity = 87/123 (70.73%), Postives = 105/123 (85.37%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAA-CLENFKGSMCVKLHESHKAWASYTGDV 369
            +SLG+RDSIMIAHSF+G +FGPAQ+MHGATYTVD EF+ + LV+K NWVVDIG ASE+L+ VL KYNFKNLNE+FP  NTTTEFMCK IFD++AA C ++F G++C+KL ESHKAW  Y GDV
Sbjct:   33 YSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDV 155          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 6.750e-56
Identity = 88/123 (71.54%), Postives = 100/123 (81.30%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIA-ACLENFKGSMCVKLHESHKAWASYTGDV 369
            ++LG+RDSIMIAHSFKG EFGPAQQMHGATYT DVEF   EL    NWV+DIGEAS +LS VL +YNFKNLNE+FPD+NTTTEFMC+ IFD +A AC   F G++ VKL ESHKAWASY G V
Sbjct:   10 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAV 132          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC)

HSP 1 Score: 174 bits (442), Expect = 6.460e-53
Identity = 84/124 (67.74%), Postives = 98/124 (79.03%), Query Frame = 1
Query:    1 KFSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAACLEN-FKGSMCVKLHESHKAWASYTGDV 369
            ++SLG+RDSIMIAHSF G+EFGPAQ MHGATYTVDVEF  E L  + NWV+DIGE   +L  VL +YNFKNLNELFP +NTTTEFMCK IF+ +   L+  FKGS+ VKL ESH AWASYT D+
Sbjct:   62 RYSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKKIFEGLCVELKGKFKGSITVKLWESHSAWASYTNDI 185          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.330e-52
Identity = 87/128 (67.97%), Postives = 102/128 (79.69%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPD-DNTTTEFMCKAIFDDIAA--CL-------ENFKGSMCVKLHESHKAWASY 357
            FSLG+RDSIMIAHSFKGE+FGPAQ +HGATYTVDV F ++ LV K NWV+DIGEAS  LS +L KYNFKNL+++FP+ +NTTTEFMC+AI  D+AA  C        E FKGS+CVKL ESHKAWA Y
Sbjct:   33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACY 160          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A5J4YKC1_PORPP (6-pyruvoyltetrahydropterin synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKC1_PORPP)

HSP 1 Score: 162 bits (411), Expect = 4.740e-49
Identity = 83/123 (67.48%), Postives = 94/123 (76.42%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNEL--FPDDNTTTEFMCKAIFDDIAACLEN-FKGSMCVKLHESHKAWASYTG 363
            F+LGVRDSIMIAHSF G EFGPAQ MHGATYTVD EF  ++LVD CNWVVDIGEA + L   L+ YN+KNL+EL  F   NTTTEFMC  I  D+AA  +  F G++ V LHESHKAWASYTG
Sbjct:    3 FTLGVRDSIMIAHSFSGAEFGPAQNMHGATYTVDCEFGTDKLVDGCNWVVDIGEALDALGKCLQAYNYKNLDELPQFKGVNTTTEFMCMQIQKDMAAAFKGKFSGTIKVTLHESHKAWASYTG 125          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A448ZT77_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT77_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.420e-46
Identity = 83/126 (65.87%), Postives = 96/126 (76.19%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGE-EFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDN-TTTEFMCKAIFDDIAACLEN----FKGSMCVKLHESHKAWASYTG 363
            FSLGVRDS+MIAHSF G   FGPA  MHGATYT DV+F AEEL  + NWV+DIG+A +ILS VL +YN KNL+E+FPD   TTTEFMCK I DDI   LE     FKG++ +KL ESHKAWA+YTG
Sbjct:   35 FSLGVRDSLMIAHSFHGHPSFGPAGGMHGATYTCDVDFLAEELHPETNWVIDIGKALDILSKVLSRYNLKNLDEVFPDKTMTTTEFMCKQIHDDIRELLETECKEFKGAVRIKLWESHKAWATYTG 160          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A1E7FBQ4_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBQ4_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.050e-45
Identity = 80/126 (63.49%), Postives = 98/126 (77.78%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSFKGE-EFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDD-NTTTEFMCKAIFDDIAACLEN----FKGSMCVKLHESHKAWASYTG 363
            FSLGV+DS+MIAHSF G   FGPA  +HGATYT DVEF ++EL  + NWV+DIG+A +ILS VL +YN KNL+++FPD+  TTTEFMCK I DDI   LE+    FKG++ VKL ESHKAWA+YTG
Sbjct:    1 FSLGVKDSLMIAHSFHGHPSFGPAGGLHGATYTADVEFLSKELHPEFNWVIDIGKALDILSKVLSRYNLKNLDDVFPDNIMTTTEFMCKQIHDDICRLLEDECKDFKGAVRVKLWESHKAWATYTG 126          
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Match: A0A7R9WRW2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRW2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.620e-45
Identity = 79/126 (62.70%), Postives = 99/126 (78.57%), Query Frame = 1
Query:    4 FSLGVRDSIMIAHSF-KGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDN-TTTEFMCKAIFDDIAACLE----NFKGSMCVKLHESHKAWASYTG 363
            F+LGVRDS+MIAHSF +   FGPA +MHGATYT DVEF+ + L  + NWV+DIG+ASEI+S+VL++YN +NL+E+FPD   TTTEFM + I DDI A L     +F+G +CVKL ESHKAWASYTG
Sbjct:   37 FTLGVRDSLMIAHSFHQHPSFGPAGKMHGATYTCDVEFQTDSLHPETNWVIDIGKASEIVSDVLKRYNLQNLDEVFPDKTMTTTEFMARQIHDDIQARLATDCADFQGQVCVKLWESHKAWASYTG 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1129.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DL62_HETAK9.500e-86100.006-pyruvoyltetrahydropterin synthase n=1 Tax=Hetero... [more]
A0A7S2V5M2_9STRA5.630e-6078.156-pyruvoyltetrahydropterin synthase n=1 Tax=Fibroc... [more]
D8LHK0_ECTSI1.820e-5870.736-pyruvoyltetrahydropterin synthase n=2 Tax=Ectoca... [more]
A0A836CJP8_9STRA6.750e-5671.546-pyruvoyltetrahydropterin synthase n=1 Tax=Tribon... [more]
L1J9Q7_GUITC6.460e-5367.746-pyruvoyltetrahydropterin synthase n=3 Tax=Guilla... [more]
W7T312_9STRA2.330e-5267.976-pyruvoyltetrahydropterin synthase n=3 Tax=Monodo... [more]
A0A5J4YKC1_PORPP4.740e-4967.486-pyruvoyltetrahydropterin synthase n=1 Tax=Porphy... [more]
A0A448ZT77_9STRA2.420e-4665.876-pyruvoyltetrahydropterin synthase n=1 Tax=Pseudo... [more]
A0A1E7FBQ4_9STRA2.050e-4563.496-pyruvoyltetrahydropterin synthase (Fragment) n=1... [more]
A0A7R9WRW2_9STRA4.620e-4562.706-pyruvoyltetrahydropterin synthase n=1 Tax=Craspe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1129contigH-akashiwo_Contig1129:51182..51842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHK0
PFAMsPTPS
Model size445
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.34e-53
EggNOG OGs2CYMG@1|root,2S557@2759|Eukaryota
Description6-pyruvoyl tetrahydropterin synthase
Cds size342
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387091.0836465-UTR-H-akashiwo_Contig1129:51181..512111681387091.0836465-UTR-H-akashiwo_Contig1129:51181..51211Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1129 51182..51211 +
1681387091.1210709-UTR-H-akashiwo_Contig1129:51769..518421681387091.1210709-UTR-H-akashiwo_Contig1129:51769..51842Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1129 51770..51842 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387091.0956533-CDS-H-akashiwo_Contig1129:51211..515051681387091.0956533-CDS-H-akashiwo_Contig1129:51211..51505Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1129 51212..51505 +
1681387091.1113567-CDS-H-akashiwo_Contig1129:51721..517691681387091.1113567-CDS-H-akashiwo_Contig1129:51721..51769Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1129 51722..51769 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1129.2.1prot_H-akashiwo_Contig1129.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1129 51212..51769 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1129.2.1

>prot_H-akashiwo_Contig1129.2.1 ID=prot_H-akashiwo_Contig1129.2.1|Name=mRNA_H-akashiwo_Contig1129.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=114bp
MIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEIL
SNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAACLENFKGSMCVKLH
ESHKAWASYTGDV*
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mRNA from alignment at H-akashiwo_Contig1129:51182..51842+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1129.2.1 ID=mRNA_H-akashiwo_Contig1129.2.1|Name=mRNA_H-akashiwo_Contig1129.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=661bp|location=Sequence derived from alignment at H-akashiwo_Contig1129:51182..51842+ (Heterosigma akashiwo CCMP452)
AAGTTTTCTCTCGGCGTTCGTGACTCAATAATGATTGCCCACAGCTTCAA GGGTGAAGAATTTGGACCTGCCCAGCAGATGCACGGAGCTACTTACACTG TTGATGTCGAATTTGAAGCCGAAGAGCTCGTAGACAAGTGCAACTGGGTG GTTGATATTGGTGAAGCATCAGAGATTCTATCTAATGTTCTAAGAAAGTA TAACTTCAAAAATCTGAACGAACTTTTTCCGGACGACAACACAACAACTG AGTTCATGTGCAAAGCCATTTTTGATGACATAGCAGCTTGTCTAGAAAAC TTCAAGGGATCAATGTGTGTGAAGGTACTATACATCATTGCCCGATGATA AGTTTAAACTGCATTCGCTTATGTTTCTTTTTTTCTTATTTTTCTTTAGC TTGAACTAAATTTACGTATGTTTTTTCTTTTCTTGTCTTTCTTTTTTTTA CTTCACTCGTAAATTTATATTATGATCACCATTTTTTTACGCACACACTT GATGATGCCTTGCCACTTCAAAATCCATCGCACTCTGTAGCTTCATGAAA GCCACAAAGCTTGGGCTTCCTACACTGGAGATGTATGAGGACAACTGCCT AACCAAACTATATATACCAGTCAGTCAGTGAGTCAGAACCAAATGAATGC TTTAATGGTGC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1129:51182..51842+

>mRNA_H-akashiwo_Contig1129.2.1 ID=mRNA_H-akashiwo_Contig1129.2.1|Name=mRNA_H-akashiwo_Contig1129.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=342bp|location=Sequence derived from alignment at H-akashiwo_Contig1129:51182..51842+ (Heterosigma akashiwo CCMP452)
ATGATTGCCCACAGCTTCAAGGGTGAAGAATTTGGACCTGCCCAGCAGAT
GCACGGAGCTACTTACACTGTTGATGTCGAATTTGAAGCCGAAGAGCTCG
TAGACAAGTGCAACTGGGTGGTTGATATTGGTGAAGCATCAGAGATTCTA
TCTAATGTTCTAAGAAAGTATAACTTCAAAAATCTGAACGAACTTTTTCC
GGACGACAACACAACAACTGAGTTCATGTGCAAAGCCATTTTTGATGACA
TAGCAGCTTGTCTAGAAAACTTCAAGGGATCAATGTGTGTGAAGCTTCAT
GAAAGCCACAAAGCTTGGGCTTCCTACACTGGAGATGTATGA
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