mRNA_H-akashiwo_Contig1127.1.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756) HSP 1 Score: 195 bits (495), Expect = 2.370e-55 Identity = 120/321 (37.38%), Postives = 182/321 (56.70%), Query Frame = 1
Query: 19 KKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPML--AHGRLTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVNE-TIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
++RT++ ++AK L+V+ STV IK+G ++ + PNLT ++K RL F S I P+ + +Y M + H+DEKWF++ + S+ Y L P E P +K KK +K VMFL VARP + GK+G +P +L+ ++ SKN AGT + ++ E + +ID+VLPA+ P+ G ++IQ D A H + +D +F+ + GGFD +LR QP SPDLNVLDLGFF +QSL ++ S + L+ A ++ + LN+VFLTLQ+ M ++V G NNY+ PH+ K R
Sbjct: 97 RRRTNIRSIAKALNVSKSTVHRRIKEGELRPHTNAIKPNLTEENKKERLEFCLSMITPSLSNPS---FYDMFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITK-VMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQ-------GHTGPIFIQQDNAKPHISI-DDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQ-EQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISKGR 404
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI0020096116 (uncharacterized protein LOC125197723 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020096116) HSP 1 Score: 187 bits (475), Expect = 6.940e-53 Identity = 115/325 (35.38%), Postives = 182/325 (56.00%), Query Frame = 1
Query: 7 EMDPKKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPMLAHGRLT--DGKVGCWPVGQLKQQQKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
E+ +R+ VA ++V+ +TV + K G+I+ + P LT +K++R+R+ S+I P A GK Y++M +T H+DEKWF++ + S Y L P+E P + K+ +K VMF+C V+RP T DGK+G +P + ++ SKN GT + +++ E + ++++++PA+ A P + S K +YIQ D A H + D +F A ++ GF F L QP+ SPD NVLDLGFF +QSL K + + L+ + ++ + + LN+VFLTLQS + +EV G NNYK PH+ K R
Sbjct: 24 ELTVLERSYYRKVASKMEVSKTTVGRWAKNGLIRPHTNAIKPALTEANKISRMRWCLSHIQP-AIYEGKLLYHAMLNTVHIDEKWFYMTKASDRYYLLPDEDEPYRSCKSKRFITK-VMFMCAVSRPQFGTDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWPANAS-------KEIYIQQDNAKPHLN-SSDSQFEALASSDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQ-DDKVATNIDQLLGNVWSSFEELTPQTLNNVFLTLQSCFSKILEVHGGNNYKIPHLNKER 337
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI001C27E83B (uncharacterized protein LOC121790904 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27E83B) HSP 1 Score: 189 bits (479), Expect = 9.110e-53 Identity = 112/325 (34.46%), Postives = 183/325 (56.31%), Query Frame = 1
Query: 7 EMDPKKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPMLAHGR--LTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
E+ +R+++ +A LDV+ STV ++K+ ++ + P L+ +K+ R+R+ S+I P + G Y+ M + H+DEKWF++ +TS Y L P+E P + K+ +K VMF+C V RP A + DGK+G +P ++ ++ SKN GT + ++++ E + +I +++PA+ A P ++S K ++IQ D A H D +FL+ + GF F +R QP QSPD NVLDLG+F +QSL K K + L++ + ++ + LN+VFLTLQ +T ++V G N+YK PHM K R
Sbjct: 94 ELSVLERSNIRKLASKLDVSKSTVGRFVKQNQLRPHTNAIKPLLSASNKVARMRWGLSHIQPLI-VNGMLKYHPMHNVVHIDEKWFYMTKTSDRYYLLPDENEPYRSCKSKRFITK-VMFMCAVCRPHFAENGEVIFDGKIGIFPFTTMEPAKRRSKNRPRGTLETKPIQSVNKEVMRECLIQKIIPAIKAKWPENIS-------KEIFIQQDNAKPHIHH-NDADFLSVASTDGFQFHIRCQPPQSPDCNVLDLGYFRAIQSLQ-DDKVAKGVDDLLRNVHSSFDELSPYTLNNVFLTLQGCLTEILKVQGGNDYKTPHMNKER 407
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI001C25E3EC (uncharacterized protein LOC121760632 n=15 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25E3EC) HSP 1 Score: 189 bits (480), Expect = 9.780e-53 Identity = 112/320 (35.00%), Postives = 183/320 (57.19%), Query Frame = 1
Query: 22 KRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPMLAHGR--LTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
+R+++ VA ++V+ +T+ ++K+ +K + + P LT +K+ R+++ S+I PT GK Y+SM + H+DEKWF++ +TS Y L P+E P + K+ +K VMF+ V+RP+ + DGK+G +P + Q+ SKN GT + ++I E +I++++P++ A P + S K ++IQ D A H + A D +F A + GF+F L QP SPD NVLDLG+F +QSL K S + L++ + ++ + + LN VF+TLQS +TA ++V G N+YK PHM K R
Sbjct: 118 ERSTIRKVASKMEVSKTTIGRFLKRNQLKPHTSAIKPTLTETNKIARIKWCLSHIQPTLA-EGKLLYHSMHNIVHIDEKWFYMTKTSDRYYLLPDEDVPYRSCKSKRFITK-VMFMAAVSRPLCGPDGDIIFDGKIGLFPFTEQIPAQRSSKNRPKGTMETKPIQSITKEVMTACLINQIIPSIKAKWPANAS-------KKIFIQQDNAKPHLRAA-DHQFEALASTDGFEFHLISQPPNSPDTNVLDLGYFRAIQSLQ-DDKMATSVDDLLRNVFNSFEELSPQTLNRVFITLQSCLTAILQVHGKNDYKIPHMNKNR 426
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI0009019CDE (uncharacterized protein LOC109159770 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009019CDE) HSP 1 Score: 185 bits (469), Expect = 1.240e-52 Identity = 119/298 (39.93%), Postives = 168/298 (56.38%), Query Frame = 1
Query: 88 IKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPM--LAHGRLTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
+K+G +K + P LT +++ RL+F S I+ ++ F M H+DEKWFF+ RTSQ Y L PEE P + KK +K VMFLC VARP L + DGK+G +P + ++ SKN AGT + E+++ E ++ +ID VLPA+ A P S S K +YIQ D A H + D EFL A GFD L QP SPD+NVLDLGFF LQSL ++ ++ + L+ A ++A+ + E+L++VFLTLQ M ++ G NNYK PH+ K +
Sbjct: 10 VKEGSLKSHSNAIKPMLTEENRKVRLQFCISMIDSSSPHNNPCFI-DMYDRVHIDEKWFFLSRTSQKYYLLPEEDEPYRTCKSKKFITK-VMFLCAVARPRFDLERNEMFDGKIGMFPFVYKEPAKRRSKNREAGTLETKPIESVNKEVTRKWLIDYVLPAIRAKWPPSSS-------KTIYIQQDNARPHISM-NDVEFLEAAKKDGFDIHLTCQPPNSPDMNVLDLGFFRALQSLQ-HQEAPRNVDELVAATHKAFNEISVESLSNVFLTLQLCMVEVMKKFGGNNYKLPHINKQK 296
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 187 bits (474), Expect = 2.050e-52 Identity = 123/335 (36.72%), Postives = 183/335 (54.63%), Query Frame = 1
Query: 4 LEMDPKK--------RTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPML-AHGRLT-DGKVGCWPVGQLKQQQKVSKNAAAGTW--KFVNETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
LE+D K R+S+ +A L+V+ ST+ ++K+G ++ + P LT +K+ R R+ S + P T GG F M + H+DEKWF++ + S Y L P+E P + K++ +K VMF+C V+RP A+G+ T DGKVG +P ++ Q+ SKN A GT K +N ++ + +I +++PA+ A P G K +YIQ D A H A DPEF A + GFD QL QP SPD N+LDLGFF +QSL K K+ + L+ ++ + + LN VFL+LQ+ +T + G N YK PH+ K R
Sbjct: 46 LELDQDKVRNLSTLERSSLRKMAVKLNVSKSTLGQWVKQGKLRPHTNAIKPALTNMNKIARARWSLSQLQPQITQGGVQFQ-GMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRSCKSKRYITK-VMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAIN-SVTKAVMRDCLIHKIIPAIKAKWPV-------GASKDIYIQQDNATPH-ITAMDPEFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQ-HEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDR 368
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: A0A484N929_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N929_9ASTE) HSP 1 Score: 185 bits (470), Expect = 2.980e-52 Identity = 124/324 (38.27%), Postives = 176/324 (54.32%), Query Frame = 1
Query: 19 KKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPMLAHGR--LTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVNET-IDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPE---GLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
+KRT++ A+A + STV ++K+GM++ + P LT +K++RLRF I P TI + S + H+DEKWFF+ +TSQ + L PEE+ P + K+ +K VMFLCVV RP+ + L DGKVG + + Q ++ SKN G + T + + K M+I+ V+PA+ P LS K++ IQ D A H + D +F+AA + GF L QP SPDLNVLDLGFF +QSL K +P L+ A A+ E LN V+L+ Q ++T +E G NNYK PHM K R
Sbjct: 12 RKRTNLRALAAAIGKPKSTVHEWVKRGMLRSHSNAIKPYLTEANKISRLRFCLDQIEPH-TIPNSPAFKSFHNVLHIDEKWFFMSKTSQKFYLLPEEEDPYRACKSKRFIAK-VMFLCVVGRPLFGENKELLRDGKVGIFHFTEKMQAKRKSKNRERGVVEVKAITSVTKQITKEMLINTVIPAIQEKWPSQLS-------KIIQIQQDNARPHIQ-GIDTDFVAAGNSNGFQITLCNQPPNSPDLNVLDLGFFRAIQSL----KDQCAPSTVADLLDAVEGAYNALSPETLNKVWLSYQQVLTKIMEHEGGNNYKLPHMGKDR 321
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 187 bits (474), Expect = 4.840e-52 Identity = 116/320 (36.25%), Postives = 182/320 (56.88%), Query Frame = 1
Query: 22 KRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPML-AHGRLT-DGKVGCWPVGQLKQQQKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
+R+S+ +A L V+ +T+ +IK+ ++ + P LT +KL RL++ + + P+ T GK ++ M + H+DEKWF++ +TS Y L P+E P + K++ +K VMF+C V+RP + G+ T DGKVG +P + Q+ SKN GT + T++ E + +I +++PA+ A P S K +YIQ D A H A DPEF A + GF L QP SPD N+LDLGFF +QSL +K ++ + L++ +A+ + + LN VFL+LQ+ +T ++ GDN+YK PHM K R
Sbjct: 98 QRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSIT-QGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITK-VMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWAS-------KEIYIQQDNATPH-ITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQ-HQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDR 406
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: A0A485LSB2_9STRA (Aste57867_23454 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSB2_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.470e-52 Identity = 122/329 (37.08%), Postives = 180/329 (54.71%), Query Frame = 1
Query: 1 LLEMDPKKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPMLAH--GRLTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVNETIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEF---LAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
L E+ +RT++ AV+ + ++ ++ Y+KKG+ + + + P LT +KLNR++F S+I P GG+ M + HLDEKWF++ + + Y L P E+ P +K K+ +K VMFL VARP G DGKVG WP Q + S N AGT + T+ + Y+ ++++V+PA+ + P G P + +Q D A AH + D + G+ F+L QP SPD+NVLDLGFF LQSL R+ KS + LI RA++D P E L+ F+TLQS M T++V G+N YK PHM K +
Sbjct: 95 LQELPLSQRTNLRAVSFHSGISYGSLHRYLKKGVFRSHSSALRPLLTDANKLNRVKFALSFIKP----GGEVC--EMNNHVHLDEKWFYLTKERRTYYLIPGEEGPDRKCKSKRFITK-VMFLTAVARPRYVDDLGTWWDGKVGTWPFVQTANALRSSVNRPAGTPETKVVTVTKDVYRSYLVEKVMPAVVSSWP--------GPPTQILLQHDNAKAH-VTSSDAALQVKIHEYKQQGWTFELAPQPPNSPDMNVLDLGFFASLQSLQ-HRESAKSIDQLIANVNRAFVDYPCERLDRTFVTLQSCMIETLKVGGNNAYKIPHMSKVK 406
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR) HSP 1 Score: 183 bits (464), Expect = 1.050e-51 Identity = 122/326 (37.42%), Postives = 183/326 (56.13%), Query Frame = 1
Query: 4 LEMDPKKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNRLRFIRSYINPTATIGGKYFYYSMRSTFHLDEKWFFICRTSQGYILTPEEQAPAQKVHHKKHTSKKVMFLCVVARPML--AHGRLTDGKVGCWPVGQLKQQQKVSKNAAAGTWKFVNE-TIDYEGYKRMVIDRVLPALWAGCPRSLSHFANGQPKVLYIQDDGACAHGKLAEDPEFLAACTAGGFDFQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAAYRAWLDSPNEALNDVFLTLQSIMTATIEVAGDNNYKFPHMYKAR 972
+E+ + RT++ +++ + VA ST+ IK+G+IK + P+LT +KL RL+F S + + F +M + H+DEKWF++ + S+ Y L PEE+ P + KK K VMFL VARP + + DGK+G +P + ++ SKN AGT + ++ E Y+R +ID VLPA+ A P+S ++IQ D A H D EF+ A T GFD +L QP SPD+NVLDLG+F +QSL ++ S + LI A +++ + +E+LN+VFLTLQ M ++ G NNYK PH+ K R
Sbjct: 1 MEIPLRCRTNIRSLSTKMKVAKSTLHRRIKEGVIKAHSNALKPHLTDDNKLVRLKFCLSMLQQESLNDAPIFE-NMFNMVHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVK-VMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQS------DVISPIFIQQDNAKPHIDPM-DVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQ-HQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQR 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1127.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1127.1.1 >prot_H-akashiwo_Contig1127.1.1 ID=prot_H-akashiwo_Contig1127.1.1|Name=mRNA_H-akashiwo_Contig1127.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=321bp MDPKKRTSVAAVAKYLDVAPSTVQLYIKKGMIKRSKAWVSPNLTTKHKLNback to top mRNA from alignment at H-akashiwo_Contig1127:229610..230581- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1127.1.1 ID=mRNA_H-akashiwo_Contig1127.1.1|Name=mRNA_H-akashiwo_Contig1127.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=972bp|location=Sequence derived from alignment at H-akashiwo_Contig1127:229610..230581- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1127:229610..230581- >mRNA_H-akashiwo_Contig1127.1.1 ID=mRNA_H-akashiwo_Contig1127.1.1|Name=mRNA_H-akashiwo_Contig1127.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=963bp|location=Sequence derived from alignment at H-akashiwo_Contig1127:229610..230581- (Heterosigma akashiwo CCMP452)back to top |