mRNA_H-akashiwo_Contig111.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A4S8L2_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S8L2_OSTLU) HSP 1 Score: 123 bits (309), Expect = 7.360e-33 Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 1 ADFALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPAAT 228
A FALLFDCDGVIVETEELHRLAYNGAFEAF L++DG+ VEW YYD LQNTVGGGKPKM+++F D WP +T
Sbjct: 40 ARFALLFDCDGVIVETEELHRLAYNGAFEAFDLKIDGEGVEWVVKYYDVLQNTVGGGKPKMRWHFNEDKKAWPTST 115
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: F0Y3E9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3E9_AURAN) HSP 1 Score: 119 bits (297), Expect = 2.110e-31 Identity = 55/71 (77.46%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPA 222
ALLFDCDGV+VETEELHRLAYN AF AFGLE G PVEWS YYD LQNTVGGGKPKMK++FT WPA
Sbjct: 1 ALLFDCDGVLVETEELHRLAYNEAFAAFGLETGGAPVEWSVAYYDVLQNTVGGGKPKMKFHFTETVKEWPA 71
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A7S0I014_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I014_9EUKA) HSP 1 Score: 119 bits (298), Expect = 4.490e-31 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGG-WPAAT 228
ALLFDCDGVIVETEELHRLAYN AF FGLEV GKPV+W+ YYD LQNTVGGGKPKM++YF GG WP T
Sbjct: 49 ALLFDCDGVIVETEELHRLAYNQAFADFGLEVGGKPVDWTVPYYDVLQNTVGGGKPKMRWYFMETCGGEWPVCT 122
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A7R9ZCV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZCV6_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.090e-31 Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 4 DFALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPA 222
D+AL+FDCDGVI+ETEELHRLAYN AFEA L +DG+PV W+ +YYD LQNTVGGGKPKM Y+F G +P+
Sbjct: 31 DYALIFDCDGVIIETEELHRLAYNAAFEAADLRIDGEPVVWTVEYYDVLQNTVGGGKPKMFYHFRETVGAFPS 103
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A7S4FAW9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAW9_CHRCT) HSP 1 Score: 118 bits (295), Expect = 9.290e-31 Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWP 219
ALLFDCDGV+VETEELHR AYN AFE FGL ++G+PV WS YYDKLQNTVGGGKPKM Y+FT A WP
Sbjct: 37 ALLFDCDGVLVETEELHRTAYNKAFEEFGLTINGEPVVWSVSYYDKLQNTVGGGKPKMFYHFTQTADAWP 106
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A7R9YQV6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQV6_9CHLO) HSP 1 Score: 115 bits (289), Expect = 1.460e-30 Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPAA 225
ALLFDCDGVIVETEELHRLAYN AF +F +DGKP+ WS +YYD LQNTVGGGKPKMK++F N+ GWPA+
Sbjct: 29 ALLFDCDGVIVETEELHRLAYNAAFSSFECTIDGKPLVWSVEYYDVLQNTVGGGKPKMKWHFGNN--GWPAS 98
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A835XQG6_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XQG6_9CHLO) HSP 1 Score: 118 bits (296), Expect = 1.570e-30 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPA 222
ALLFDCDGVIVETEELHR AYN AFEAFG +DG P+ W+T+YYD LQNTVGGGKPKMKY+F N+ GWP+
Sbjct: 63 ALLFDCDGVIVETEELHRKAYNAAFEAFGCAIDGVPLVWTTEYYDVLQNTVGGGKPKMKYHFKNN--GWPS 131
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A2V0NMP2_9CHLO (HAD subfamily IA n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NMP2_9CHLO) HSP 1 Score: 117 bits (293), Expect = 3.450e-30 Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPAAT 228
AL+FDCDGVIVETEELHR AYNGAFEAFGL V G+P EW T YYD+LQNTV GGK KMKY+F+N+ GW AT
Sbjct: 49 ALIFDCDGVIVETEELHRRAYNGAFEAFGLTVKGEPCEWPTKYYDRLQNTVAGGKGKMKYHFSNN--GWEVAT 119
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: A0A8J5X279_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X279_DIALT) HSP 1 Score: 117 bits (292), Expect = 3.750e-30 Identity = 55/74 (74.32%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 10 ALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGG-WPAAT 228
ALLFDCDGV+VETEELHR AYN AF FGLEV + V WS +YYDKLQNTVGGGKPKM+Y+FT GG WPA T
Sbjct: 44 ALLFDCDGVLVETEELHRTAYNMAFAEFGLEVGNEAVVWSVEYYDKLQNTVGGGKPKMRYHFTQTCGGEWPAVT 117
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Match: L1JYV8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JYV8_GUITC) HSP 1 Score: 116 bits (291), Expect = 4.800e-30 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 7 FALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLQNTVGGGKPKMKYYFTNDAGGWPAA 225
FALLFDCDGVIV TEELHRLAYNGAF+ + E++G+PV WS +YYD LQNTVGGGKPKMK++F N+ GWP +
Sbjct: 71 FALLFDCDGVIVLTEELHRLAYNGAFQDYSAEINGQPVNWSVEYYDVLQNTVGGGKPKMKWHFNNN--GWPTS 141 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig111.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig111.5.1 >prot_H-akashiwo_Contig111.5.1 ID=prot_H-akashiwo_Contig111.5.1|Name=mRNA_H-akashiwo_Contig111.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=76bp ADFALLFDCDGVIVETEELHRLAYNGAFEAFGLEVDGKPVEWSTDYYDKLback to top mRNA from alignment at H-akashiwo_Contig111:396746..397189+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig111.5.1 ID=mRNA_H-akashiwo_Contig111.5.1|Name=mRNA_H-akashiwo_Contig111.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=444bp|location=Sequence derived from alignment at H-akashiwo_Contig111:396746..397189+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig111:396746..397189+ >mRNA_H-akashiwo_Contig111.5.1 ID=mRNA_H-akashiwo_Contig111.5.1|Name=mRNA_H-akashiwo_Contig111.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=228bp|location=Sequence derived from alignment at H-akashiwo_Contig111:396746..397189+ (Heterosigma akashiwo CCMP452)back to top |