mRNA_H-akashiwo_Contig1107.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A6V1K7Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7Z9_HETAK) HSP 1 Score: 305 bits (782), Expect = 1.190e-101 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 1
Query: 1 AVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTVSFARLQSSAKFAKRCSNILTLTIVGLTIEKAFE 492
AVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDASVVVAT+IGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTV+FARLQSSAK AKRCSNIL LTIVGLTIEKAFE
Sbjct: 200 AVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDASVVVATVIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTVAFARLQSSAKLAKRCSNILALTIVGLTIEKAFE 363
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.740e-25 Identity = 65/157 (41.40%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 1 AVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTVSFARLQSSAKFAKRCSNI-LTLTIVG 468
A ++G+ W+ AALL LT VAL G HKV+ H+ ++++L++I+ IPL+LHFGW+ AA LVS NG LA +I K L S AS+V + +V R +P +SWALA +AD K W +L+ V L+ + A S I L L IV
Sbjct: 157 AKKSGFLWLPAALLTLTAVALGGAHKVLFDALHS--EEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTASISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQLEGKVPGPILKRLSGLASLGSGISLLLAIVA 311
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A7S3UZ57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ57_HETAK) HSP 1 Score: 93.6 bits (231), Expect = 4.330e-21 Identity = 57/141 (40.43%), Postives = 79/141 (56.03%), Query Frame = 1
Query: 22 WIQAALLVLTGVALSGVHKVMTS---QPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLAR-TPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTVSFARLQSSAKFAK 432
W AALL T AL+G H + + Q G + D+ + +PLSLHFGW+ AA LV+ NG +A T T+ K L + ASV VA G VA R DPV + ++WALA +AD++ W +L+ V A L+ FA+
Sbjct: 4 WAPAALLAATAAALAGAHGAVRAHFLQGAAAPGGSSWTDYCLCNLPLSLHFGWITAATLVNANGAVANDTRRTVVTKSLVARASVAVAVAAGAAVAWLRRDPVYSLVVAWALAAVADEQGWGRLRGEVPDALLEGYVGFAR 144
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.670e-18 Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 22 WIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNG-VLARTPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTVSFARLQSSAKFAK 432
WI A LL L AL G H ++ +L+ L + +A +PL+LHFGW+ AA LV+ NG V A P + K + AS+ +A ++G V R DP+ A ++WALA +AD+ AW KL+ V LQ AK
Sbjct: 146 WIPALLLGLGAAALGGAHGILVQALED--SELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIADEAAWGKLRGQVDETVLQIQRLTAK 281
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A7S2UVR2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVR2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.810e-15 Identity = 47/146 (32.19%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 7 ENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLA----RTPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADDKAWEKLKSTVSFARLQSSAKFAK 432
++ +GW+ L+ L L+ + H+ ++NI+++++ IPL+LHF WM LV+ NG LA P T K F+ S + A ++G A +RT+P VA +SWALAG+AD + W ++ + + LQ + A+
Sbjct: 219 KSSFGWLSPVLITLGAYCLNLCSLINYRALHS--DEMNIIEYVLISIPLTLHFAWMTIKSLVAWNGWLAIFDREFPKT---KVAFAGLSALAAIVLGAYFAIERTEPFVALVVSWALAGIADRRGWYMMEGLLKYETLQKLSTMAR 359
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A7S1SIL2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SIL2_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 1.560e-14 Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 22 WIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADD 363
W+ ALL VAL G H V+ + + G + + A +PLSLHFGW+ AA +VS+N + A T L++ A+ + ASVV + ++G V DP+ A L+WAL+G+A D
Sbjct: 15 WLSPALLATEAVALGGAHHVLRAAVQS--GAMTTATYFTAHVPLSLHFGWITAASVVSLNSLAALT-LSLPAQLATAFASVVGSAVVGTGVTVVTGDPLYALTLAWALSGVASD 125
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A7S0WI04_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI04_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 2.830e-11 Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 1 AVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNIL-DFIVAQIPLSLHFGWMMAAGLVSVNGVLA----RTPLTIRAKHLFSDASVVVATMIGVVVAAKRTDPVVAFALSWALAGLADDK 366
A +G WI AALL T +AL+G V+T P G + ++AQ+PLSLHFGW+ AA LV+ N A +++R + + AS+ +A ++G +VA R D + + L+WAL + DK
Sbjct: 176 ARPSGVFWISAALLTATAIALAGAEAVVTG-PSVGTGSWTAVGQRVLAQMPLSLHFGWVTAASLVNWNSFFAVLYRDAHISLRTQIWLAFASLHLAYIVGSIVAVVRMDFLYSLTLAWALTAIKTDK 301
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Match: A0A7S3V6A8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6A8_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 6.340e-10 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 7 ENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPLSLHFGWMMAAGLVSVNGVLARTPLTIRAKHLFSDA---SVVVATMIGVVVAAKRTDPVVAFALSWALAGLAD 360
+ G+I LL T +LS H + +QP L +LN + +P+SLHFGW +AA LVS+NG ++ + +K L + A SVV AT +G+ + R+ PV ++WAL +AD
Sbjct: 143 KGAAGFINTGLLSATAYSLSRAHAIFVAQPQ-LYSNLN---HAILFLPMSLHFGWTVAASLVSLNGAISMQENS--SKRLIAYAGHISVVAATGLGIFITVTRSAPVFGGVIAWALTAVAD 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1107.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1107.6.1 >prot_H-akashiwo_Contig1107.6.1 ID=prot_H-akashiwo_Contig1107.6.1|Name=mRNA_H-akashiwo_Contig1107.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=164bp AVENGYGWIQAALLVLTGVALSGVHKVMTSQPHTLVGDLNILDFIVAQIPback to top mRNA from alignment at H-akashiwo_Contig1107:252639..253131+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1107.6.1 ID=mRNA_H-akashiwo_Contig1107.6.1|Name=mRNA_H-akashiwo_Contig1107.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=493bp|location=Sequence derived from alignment at H-akashiwo_Contig1107:252639..253131+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1107:252639..253131+ >mRNA_H-akashiwo_Contig1107.6.1 ID=mRNA_H-akashiwo_Contig1107.6.1|Name=mRNA_H-akashiwo_Contig1107.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=492bp|location=Sequence derived from alignment at H-akashiwo_Contig1107:252639..253131+ (Heterosigma akashiwo CCMP452)back to top |