mRNA_H-akashiwo_Contig1103.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A7S3Z784_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z784_9EUKA) HSP 1 Score: 192 bits (488), Expect = 1.370e-50 Identity = 126/361 (34.90%), Postives = 194/361 (53.74%), Query Frame = 1
Query: 22 DVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDD-LMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVMALVSEFSHEQIRPTNIPLSHSTMKEINEAKGEPLDKAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKK-GNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVYEDNMSLIYILNGFGYNRRTK 1098
D++ A+L+G L+EP YM+IPLG+ DH K+ KL K +YGL + WN F+ +T + FKR +S P +Y K E+ ++I L ++ DD + SSN+D L +N + ++ +K+ IK LG+E + +L K + L+ + + E P+S S K GEP D+ +RS IG L ++ TRPDIA+ + LSR LN P H +A + LL YLK T + + + G +N +Y DAD + +STSG +IF NG LI W SK+Q+ +A+ST E+E +AL V ++ + EIGI ++ ++EDN+ + I +RTK
Sbjct: 1039 DINNAFLHGFLQEPVYMQIPLGMRDRYDHRKYCCKLNKGLYGLQVSARAWNEEFNNFVTG--LGFKRSVSDPCVYTLKHEHGEMI-LCVYVDDLIICSSNEDELSKNIVKKIEDKYGIKEYKELDFVLGIEVLQRKDHILLSQKAYIQRLLKKHNMEDCNGVRTPMSPS-QKLTRNPDGEPADET---TYRSIIGGLAFVMTCTRPDIAFAVSKLSRYLNAPTKDHMQAALHLLRYLKHTMEFCLHYPRDGGRKWN-------IYVDADHGGCLDTRRSTSGRLIFYNGCLISWKSKRQTVVAKSTAEAEHIALSDAVTDGIWLKNLAKEIGIDFNDATIHEDNIPCLQIAKNPIITQRTK 1385
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A6A3L5P5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5P5_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.040e-49 Identity = 125/384 (32.55%), Postives = 197/384 (51.30%), Query Frame = 1
Query: 4 MKMSDFDVSTAYLYGRLKEPRYMEIPLGILSNID------HNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVM--ALVSEFSHEQIRPTNIPLSHSTM--KEINEAKGEPLDKAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNV-YEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
M++ DV TA+LYG+LKE YME+P G+ +D + + L +++YGL +A VWN T D R+ M F+ + P +Y + + D+ I + L+ DD + S ++ + +AEKF+IK LG ++ LG+E D +R QK +++ +F E +P PL K E +DK +RS +G L ++A TRPDI+ + LSR L P HW A + ++ YL T + GI + G L + Y DAD A +D +S SG+++ + G+ +VW S Q T+A S+ E+E +AL VK ++ +L +IG V YEDN + + GY RTKH+ I+ ++
Sbjct: 10 MEIEQCDVDTAFLYGKLKEEIYMELPEGLRELLDLAEAEGEDNVVCTLPQSLYGLKQASRVWNETIDKRLKS--MGFEPADADPCVYTRGEGEDECI-VCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGIIQKAYTESIIKKFGQENAKPCLAPLEPGVQLTKGDEPQTEEDIDKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYD-GLLGTQ-----LEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMTLAKNVGYQARTKHIDIRYHF 384
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A178VBX6_ARATH (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178VBX6_ARATH) HSP 1 Score: 179 bits (453), Expect = 6.630e-49 Identity = 117/378 (30.95%), Postives = 198/378 (52.38%), Query Frame = 1
Query: 1 NMKMSDFDVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQK--VMALVSEFSHEQIRPTNIPLS-HSTMKEINEAK-GEPLDKAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
NM++ DV TA+L+G L+E YM P G +K L LK+++YGL ++ WN FD + +K+ R +Y+KK D I+L L+ DD + S+N + L+ +F++K LG +K+ LGME D L Q+ V ++ F + +P + PL H +K + + E ++ I + + IG + + TRPD+AY++ ++SR ++KP HW+A+ +L Y++ T +CF+K DF + YCD+D + + +S +G + + G+ I W SK Q +A S+ E+E +AL VK ++ G E+G D V+ D+ S I + ++ RTKH+ I+L++
Sbjct: 6 NMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSDKACL-LKRSLYGLKQSPRQWNLRFDEFMRG--IKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRGAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQE-DFL-----LRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAIALAKNSVHHERTKHIDIRLHH 374
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: Q9ZPU5_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9ZPU5_ARATH) HSP 1 Score: 182 bits (462), Expect = 3.780e-47 Identity = 118/378 (31.22%), Postives = 198/378 (52.38%), Query Frame = 1
Query: 1 NMKMSDFDVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQK--VMALVSEFSHEQIRPTNIPLS-HSTMKEINEAK-GEPLDKAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
NM++ DV TA+L+G L+E YM P G NK L LK+++YGL ++ WN FD + +K+ R +Y+KK D I+L L+ DD + S+N + L+ +F++K LG +K+ LGME D L Q+ V ++ F + +P + PL H +K + + E ++ I + + IG + + TRPD+AY++ ++SR ++KP HW+A+ +L Y++ T +CF+K DF + YCD+D + + +S +G + + G+ I W SK Q +A S+ E+E +AL VK ++ G E+G D V+ D+ S I + ++ RTKH+ I+L++
Sbjct: 921 NMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCL-LKRSLYGLKQSPRQWNLRFDEFMRG--IKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQE-DFL-----LRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDIRLHF 1289
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A6A3HKQ8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HKQ8_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.480e-46 Identity = 120/381 (31.50%), Postives = 198/381 (51.97%), Query Frame = 1
Query: 4 MKMSDFDVSTAYLYGRLKEPRYMEIPLGILSNID------HNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVM--ALVSEFSHEQIRPTNIPLSHST-MKEINEAKGEPLD-KAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNV-YEDNMSLIYILNGFGYNRRTKHMLIK 1113
M++ DV T +LYG+L+E YME+P G+ ++ + + L +++YGL +A VWN T D + M F+ + P +Y + + D+ I + L+ DD + S ++ + +AEKF+IK LG ++ LG+E D +R QK +++ +F E +P PL + + +E + E + K +RS +G L ++A TRPDI+ + LSR L P HW A + ++ YL T + GI + G L + Y DAD A +D +S SG+++ + G+ +VW S Q T+A S++E+E +AL VK ++ +L++IG V YEDN + + GY RTKH+ I+
Sbjct: 10 MEIEQCDVDTVFLYGKLEEEIYMELPEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKS--MGFEPADADPCVYTRGEGEDECI-VCLYVDDMLIASRQKTVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEVKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYD-GLLGTQ-----LEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSIEAEYMALSDCVKECVWMRRLLEDIGPEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIR 381
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: UPI000CD7E7C7 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD7E7C7) HSP 1 Score: 171 bits (433), Expect = 3.460e-46 Identity = 121/365 (33.15%), Postives = 193/365 (52.88%), Query Frame = 1
Query: 22 DVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVMALVSEFSHEQIRPTNIPLSHSTMKEINEAKGEPLDKA----HIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKH 1101
DV+ A+LYG L E YM P G S D + KL K++YGL +A WN ++ + FK+ ++ +++ + EN I+ L ++ DD + +++ +EN L +F IK LG K +LG+E I ++ + + ++ + L+ EF +P PL + + + + LDK+ +I EF+ IGKL ++ TRPDI+Y + ILS+ ++KP H K LL YLK P G+ K N LNI+ Y DAD A +S +G +++ SL+ W SKKQST++RS+ ESE AL + +I+ +L + GI P NV+ DN S + + ++ +TKH
Sbjct: 22 DVNNAFLYGDLSEDVYMSQPEGYHSKGDIR--VCKLIKSLYGLKQAPRKWNEKLSHSLS--IFGFKQSMNDYSIFVRNHENT-IVILLVYVDDIIITGNSNAELENVKKFLKSQFFIKDLGELKYFLGIEVIKTDKGICLNQRKYCLELLHEFGMLGCKPVKTPLETNLVLK----RESDLDKSDCVVNITEFQKLIGKLIYLT-KTRPDISYAVHILSQYMHKPHKSHLKVAFRLLRYLKNCPGKGVHITKDNS------LNITAYVDADWAKCLFSRRSVTGFLVYFGNSLVSWKSKKQSTVSRSSTESEYRALGFVACEIIWILKLLFDFGINGLTPVNVFCDNESAVKLALNPVFHEKTKH 370
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A2P4Y542_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y542_9STRA) HSP 1 Score: 175 bits (444), Expect = 3.770e-46 Identity = 122/379 (32.19%), Postives = 204/379 (53.83%), Query Frame = 1
Query: 22 DVSTAYLYGRLKEPRYMEIPLGI-----LSNID-HNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVM--ALVSEFSHEQIRPTNIPLSHST-MKEINEAKGEPLDKAHIHE--FRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNV-YEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
DV TA+LYG+L+E YME+P G+ L++ + + L +++YGL +A VWN T DA + + M FK + P +Y + E D + L+ DD + S D++ + +AEKF+IK LG ++ LG+E D +R Q+ ++++ F E +P+ PL S + + NE + + DKA + +RS +G L ++A TRPDIA + LSR L P HW A + ++ YL T + I + G + ++ Y D DL +D +S SG+M+ + G+ +VW S Q T+ S+ E+E +AL+ +K + ++ +L++IG P V Y++N + + GY RTKH+ I+ ++
Sbjct: 116 DVDTAFLYGKLEEEIYMELPEGLQELLALADTEGEGDVVCCLLQSLYGLKQASRVWNETIDAHL--KTMAFKAADADPCVY-TRGEGDSECIVCLYVDDMLIASREKDIIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERKALTISQRAYTESIINRFGQENAKPSLTPLDPSVHLTKANEPQSDD-DKAKMKSKPYRSLVGSLMYLACGTRPDIAVAVAKLSRYLENPGQRHWDAGIKVVHYLLKTKDVAITYD-GCMGAE-----LTAYSD-DLTGNRDDRRSVSGVMLMVCGAPVVWRSTFQKTVILSSTEAEYMALNDCIKEVVWMRRLLEDIGAEKHGPMVIYDENQGAMALAKNVGYQARTKHIDIRYHF 483
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A2P4YFB2_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YFB2_9STRA) HSP 1 Score: 178 bits (452), Expect = 7.680e-46 Identity = 124/377 (32.89%), Postives = 201/377 (53.32%), Query Frame = 1
Query: 4 MKMSDFDVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVMALVSEFSHEQIR--PTNIPLSHSTMKEINEAKGEPLDKAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGI--RYDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
+K+ DV AYL L +P Y++ P G S D ++L K +YGL ++G +WN D+ + + F+R P LYY + +D + L L+ DD L S + L ++ + +L E+F IK LG +++ LG+ + H +Q + L+++ ++ + PT + ++H E G+P + +R AIG L WI+ TRPDIA LSR ++ P + HWK + +L YLK T N+G+ +K G+ +K L +Y DA+ A KSTSG ++ ING I W S+KQ+T+A ST+E+E +A V+ I +L E+G+ + D + DN S I + +RT+H+ IK ++
Sbjct: 779 VKLRQGDVPNAYLKSALDKPIYLKPPAGTTSANDRRVWLLL--KGLYGLKQSGKLWNDLIDSFL--QAQGFQRSQMDPCLYYLRY-HDKLCVLGLYVDDILLVSQDSALSDHIMSKLTERFHIKDLGDARKCLGIWIDYTTDGITIHQEQTTLDLLAKMGMQECKTAPTPMEVNHHFFGE----HGDPFHDTTL--YREAIGSLLWISNCTRPDIATATNCLSRFVSCPTSVHWKGVKRILRYLKGTTNSGLFYKFGHGIASK--LQTIIYSDANWAGDSSSAKSTSGSVLQINGMTISWSSRKQTTVALSTMEAEYVAACSAVQDCIAIHQLLQELGLMQQTDAVLLRVDNQSAIKSMRNVISTQRTRHLQIKYHF 1142
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A2P4YK34_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK34_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.320e-45 Identity = 119/378 (31.48%), Postives = 203/378 (53.70%), Query Frame = 1
Query: 22 DVSTAYLYGRLKEPRYMEIPLGI-----LSNID-HNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAEKFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVM--ALVSEFSHEQIRPTNIPLSHST-MKEINEAKGEPLD-KAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNV-YEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
DV TA+LYG+L+E YME+P G+ L++ + + L +++YG+ +A VWN T DA + + M+FK + P +Y + +++ + I + L+ DD + S D++ + +AEKF+IK LG+++ LG+E D +R Q+ ++++ F E +P+ PL + + +E K + + K +RS +G L ++A RPDIA + LSR L+ P HW A + ++ YL T I + G + ++ Y DAD +D +S SG+M+ I G+ +VW S Q T+A S+ E+E +A +K + ++ +L++IG P V YEDN + GY RTKH+ I+ ++
Sbjct: 403 DVDTAFLYGKLEEEIYMELPEGLQELLALADTEGEGDVVCLLPQSLYGIKQASRVWNETIDAHL--KTMRFKAADANPPVYTRGEDDRECI-VCLYVDDMLITSRERDIIASMKAGIAEKFRIKDLGLARFILGIEINCDMERKALTISQRAYTESIINRFGQENAKPSVTPLDRIVHLTKTDEPKSDDVKAKMKSKPYRSLVGSLMYLACGIRPDIAVAVAKLSRYLDNPGQRHWDAGIKVVRYLLKTKGVAITYD-GCVGAE-----LTAYSDADWTGNRDDRRSVSGVMLMICGAPVVWRSTFQKTVALSSTEAEYMAHSNCIKEVVWMRRLLEDIGAEQHGPTVIYEDNQGAKALAKNVGYQARTKHIDIRYHF 771
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Match: A0A6V7NSD9_ANACO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7NSD9_ANACO) HSP 1 Score: 171 bits (433), Expect = 3.750e-45 Identity = 115/375 (30.67%), Postives = 204/375 (54.40%), Query Frame = 1
Query: 10 MSDFDVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPEAGNVWNSTFDARITDEVMKFKRCISAPALYYKKKENDDIIFLTLHTDDGKLFSSNDDLMENTLDQLAE-KFKIKRLGVSKEYLGMEQIMDNQRLLWHNKQKVMALVSEFSHEQIRPTNIPLSHSTMKEIN--EAKGEPLDKAHIHEFRSAIGKLNWIAGATRPDIAYTMQILSRGLNKPFTHHWKALVLLLGYLKVTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNY 1122
+ D+ A+L+G L+E YME P G ++ + +L+K++YGL ++ W F + + MK +C ++Y+ E + II L ++ DD + ND ++L L + +F+ K LG+ K +LG+E + + ++ V+ L++E + +P + P++ + N E +P ++R +GKLN++ TRPDIAY++ +LS+ ++ P HW+AL +L YLK P GI +K N NI + DAD + D +ST G +F+ G+L+ W SKKQS ++RS+ ESE A+ V + +I +LDE+G++ +P ++ DN + ++I + ++ RTKH+ I ++
Sbjct: 85 LHQLDIKNAFLHGDLQEEVYMEQPPGFVAQ----GRVCRLRKSLYGLKQSPRAWFGRFSEVVQEFGMKKSKCDHF--VFYRHSETN-IILLVVYVDDI-FITGNDTAGISSLKLLLQTQFQTKDLGMLKYFLGIEVTRCKRGIFLSQRKYVLDLLAETGNLGAKPCSAPMAPNLQLTANADELFEDP------EKYRRLVGKLNYLT-VTRPDIAYSVSVLSQFMSSPTVTHWEALGQILCYLKGAPGRGILYK------NHGHSNIECFSDADWSGSKVDRRSTIGYCVFVGGNLVSWRSKKQSVVSRSSAESEYRAMAQSVCEVMWIQQLLDEVGLKNPQPIKLWCDNQAALHIASNPIFHERTKHIEIDCHF 438 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1103.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1103.1.1 >prot_H-akashiwo_Contig1103.1.1 ID=prot_H-akashiwo_Contig1103.1.1|Name=mRNA_H-akashiwo_Contig1103.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=373bp MKMSDFDVSTAYLYGRLKEPRYMEIPLGILSNIDHNKFILKLKKAVYGLPback to top mRNA from alignment at H-akashiwo_Contig1103:60499..61620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1103.1.1 ID=mRNA_H-akashiwo_Contig1103.1.1|Name=mRNA_H-akashiwo_Contig1103.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1122bp|location=Sequence derived from alignment at H-akashiwo_Contig1103:60499..61620+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1103:60499..61620+ >mRNA_H-akashiwo_Contig1103.1.1 ID=mRNA_H-akashiwo_Contig1103.1.1|Name=mRNA_H-akashiwo_Contig1103.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1119bp|location=Sequence derived from alignment at H-akashiwo_Contig1103:60499..61620+ (Heterosigma akashiwo CCMP452)back to top |