mRNA_H-akashiwo_Contig1101.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A6V1TCR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TCR2_HETAK) HSP 1 Score: 137 bits (346), Expect = 3.360e-38 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 70 NEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
EVLEKPVQTPC+HLFCEDEL +WL R+ETCP D+ + E CKASRIITNMLGELERYC FKDKGC W PS+RLK+H
Sbjct: 35 QEVLEKPVQTPCEHLFCEDELLEWLLRKETCPVDQTIINPDEICKASRIITNMLGELERYCKFKDKGCEWAGPSDRLKNH 114
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A6A4WAL1_AMPAM (E3 ubiquitin-protein ligase NRDP1 n=5 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WAL1_AMPAM) HSP 1 Score: 97.4 bits (241), Expect = 2.340e-23 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG + A F + I L+C IC VLEKPV+TPC+H FCE + WL R CP D + T + C+ SR++TN LG LE C F+ +GC+ P E L +H
Sbjct: 1 MGYETARFTSAN-IDKDLMCPICMCVLEKPVETPCEHSFCEACILQWLQTRRRCPLDNTVVGTNQLCEPSRLLTNQLGRLEIACDFRAEGCTERVPLEYLAAH 102
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: UPI001F10AFF6 (E3 ubiquitin-protein ligase NRDP1-like n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F10AFF6) HSP 1 Score: 94.0 bits (232), Expect = 8.230e-22 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG D F IS +L+C IC VLE P+ T CDHLFC + ++DWL TCP D PL+T +A R I N++ L+ YC ++D GC T E+ H
Sbjct: 1 MGFDTDRF-EDSEISEELICSICTGVLEDPLTTHCDHLFCNECINDWLRHHHTCPIDRCPLRTCMLKRAPRAIRNLINRLKIYCPYRDDGCEQTIRLEQYDQH 102
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A8J2S367_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S367_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.690e-20 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG D +FV IS LLC IC+ VLE+PVQT C+HLFCED L WL R+ TCP + + +A R I ++ +LE C D C WT ++L +H
Sbjct: 1 MGRDAELFVDAAAISRHLLCSICHGVLERPVQTACEHLFCEDCLLAWLCRKATCPVCQAVTEPEAVKRAPRAIVGLIDDLEVRCDHCD--CDWTGALDKLNAH 101
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A8J5AEB5_9DIPT (RING-type domain-containing protein n=2 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5AEB5_9DIPT) HSP 1 Score: 93.2 bits (230), Expect = 1.870e-20 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG D+ FV I +L+C IC VL+ P +TPC+H FC + WL+ ETCP D P++T + + SR++ N+L +L+ C F D GCS E L SH
Sbjct: 1 MGYDVERFVG-GAIERELICQICASVLQDPWETPCEHFFCMTCMQSWLAVSETCPIDRQPIRTADLKQPSRLLRNLLAQLDIKCDFVDNGCSNIVKLENLASH 102
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A6P6Y331_DERPT (E3 ubiquitin-protein ligase NRDP1-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6Y331_DERPT) HSP 1 Score: 89.4 bits (220), Expect = 5.460e-20 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG D F IS +L+C IC VLE P+ T CDHLFC D ++DWL TCP D PL++ +A R I N++ L+ YC ++ GC T E+ + H
Sbjct: 1 MGFDTDRF-EDCEISEELICSICTGVLEDPLTTHCDHLFCNDCINDWLRDHHTCPIDRCPLRSCMLKRAPRAIRNLINRLKIYCPYRMDGCKQTFCLEQFEQH 102
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A7R9LJK4_9ACAR (Hypothetical protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9LJK4_9ACAR) HSP 1 Score: 87.8 bits (216), Expect = 1.590e-19 Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG D + F D IS +LLC IC+EVLE+ + T C+HLFC +++WLS TCP D + A R++ N+LG+L+ C F GC E L+ H
Sbjct: 1 MGYDCSRFT--DEISEELLCSICSEVLEEALTTDCEHLFCRQCITEWLSVNRTCPIDRLYITARNLKAAPRVVRNLLGKLDIRCDFAPDGCQTVVALEALEKH 101
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A482RQA3_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQA3_9ARCH) HSP 1 Score: 82.0 bits (201), Expect = 1.340e-18 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPL 183
MG DL FVHP+RIS QL+C IC +VL +PV T +HLFCE+EL +WL+R CP + P+
Sbjct: 1 MGRDLEDFVHPERISSQLICPICTQVLHRPVMTMSEHLFCEEELLEWLTRSSLCPVTKQPI 61
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A7R9LIR8_9ACAR (Hypothetical protein n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LIR8_9ACAR) HSP 1 Score: 85.1 bits (209), Expect = 2.190e-18 Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 1 MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
MG D F + IS +LLC IC+EVLE+ + T C+HLFC +++WLS TCP D + + A R++ N+LG+LE C F GC E L H
Sbjct: 1 MGYDCQRFT--EDISEELLCSICSEVLEEALTTDCEHLFCRQCITEWLSVNRTCPIDRLYITSRNLKAAPRVVRNLLGKLEIRCDFATDGCQTIVALEALDKH 101
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Match: A0A7S0N1N9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1N9_9CHLO) HSP 1 Score: 88.6 bits (218), Expect = 2.390e-18 Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 7 VDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRRETCPADENPLKTGETCKASRIITNMLGELERYCSFKDKGCSWTSPSERLKSH 309
++ ++F+ I P L C I V+E PV+TPCDHLFC ++ WLS +TCP+ PL TG+ K R I +++ +LE C ++ GC+W E L H
Sbjct: 4 LEQSLFLRSSEIHPTLYCGINMGVMENPVRTPCDHLFCSHCITQWLSYNQTCPSCREPLATGDL-KRDRNIESIINDLEVLCGAEEVGCNWAGRLEELPKH 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1101.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1101.4.1 >prot_H-akashiwo_Contig1101.4.1 ID=prot_H-akashiwo_Contig1101.4.1|Name=mRNA_H-akashiwo_Contig1101.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=103bp MGVDLAVFVHPDRISPQLLCMICNEVLEKPVQTPCDHLFCEDELSDWLSRback to top mRNA from alignment at H-akashiwo_Contig1101:215119..215427+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1101.4.1 ID=mRNA_H-akashiwo_Contig1101.4.1|Name=mRNA_H-akashiwo_Contig1101.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=309bp|location=Sequence derived from alignment at H-akashiwo_Contig1101:215119..215427+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1101:215119..215427+ >mRNA_H-akashiwo_Contig1101.4.1 ID=mRNA_H-akashiwo_Contig1101.4.1|Name=mRNA_H-akashiwo_Contig1101.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=309bp|location=Sequence derived from alignment at H-akashiwo_Contig1101:215119..215427+ (Heterosigma akashiwo CCMP452)back to top |