mRNA_H-akashiwo_Contig1101.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1101.1.1
Unique NamemRNA_H-akashiwo_Contig1101.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: A0A7S3UVW6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVW6_HETAK)

HSP 1 Score: 308 bits (790), Expect = 7.950e-102
Identity = 150/216 (69.44%), Postives = 174/216 (80.56%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDETGLHEIGDGGLILSMRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSE 648
            WG+ +FLS+D +FDE GLH IGDGGLIL ++A I  +GWIPRQP LN  H F  ++    H SV L +F++ EFSD+SLVCQQEQTFRCHRAILSAWSPVFKAMFSHS MAEGQTNEV IQD+KP  MEALLKFMY G L+CE  DELDLLAA+ KYSVQ  KK CE+ LV  LEDN SYVPQVLAFTSLH+D+ CLH+AAL+ LNE + E++SSE
Sbjct:   95 WGWEDFLSSDLNFDEIGLHRIGDGGLILRLKADIMKEGWIPRQPDLNHGHIFDKKDDAPTHGSVCLALFENPEFSDISLVCQQEQTFRCHRAILSAWSPVFKAMFSHSGMAEGQTNEVIIQDIKPPAMEALLKFMYTGQLQCEQADELDLLAAAHKYSVQSAKKLCEERLVGCLEDNLSYVPQVLAFTSLHNDIRCLHHAALQTLNENRDEIMSSE 310
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: E3LRZ3_CAERE (CRE-BATH-43 protein n=2 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3LRZ3_CAERE)

HSP 1 Score: 120 bits (302), Expect = 1.010e-27
Identity = 83/238 (34.87%), Postives = 122/238 (51.26%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDETGLHEIGDGGLILSMRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQE-----QTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVALEVL 699
            WG+  F+  DF  DET     GD   I    + +A    +  Q +++Q   FK+  C LA    GL  F   +FSD +L+C+ +     QTF  H+AILSA S VF AMF H +M E  TN  T+ D++P VM  LL +MY G  +        L+AA+ KY +  +K  CEQ L   L  + + +  +LA   ++   + L   A+  +N    EV+SSEGW+   ++ P +  EV 
Sbjct:  203 WGFKKFIRRDFLLDETNGLLPGDRLSIFCEVSVVAETVNVTGQTNVSQ--LFKVPPCRLADDMQGL--FDKKQFSDFTLICKSDSGAPSQTFYIHKAILSARSRVFSAMFEH-HMQESDTNMTTVDDIEPEVMRELLVYMYTGQAKYIEQMAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNACLTLMLA--DMYSAAQ-LRAHAINFINVNATEVMSSEGWEDLVREHPKLLEEVF 432
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: A8X9W5_CAEBR (Protein CBR-BATH-43 n=5 Tax=Caenorhabditis TaxID=6237 RepID=A8X9W5_CAEBR)

HSP 1 Score: 116 bits (290), Expect = 4.860e-26
Identity = 83/238 (34.87%), Postives = 115/238 (48.32%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDETGLHEIGDGGLILSMRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQE-----QTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVALEVL 699
            WG+  F+  DF  DE      GD   I    + +A    +  Q ++ Q   FK+  C LA    GL  F   +FSD +L+C+ E     QTF  H+AI+SA S VF AMF H +M E  TN  T+ D+ P VM  LL +MY G           L+AA+ KY +  +K  CEQ L   L    + +  VLA   ++   + L   A+  +N    EV+SSEGW    +  P +  EV 
Sbjct:  203 WGFKKFIRRDFLLDEANGLLPGDRLSIFCEVSVVAETINVTGQTNVTQ--LFKVPPCRLADDMQGL--FDKQQFSDFTLICKSENGAPPQTFYIHKAIVSARSRVFSAMFDH-HMQESDTNMTTVDDIDPDVMRELLVYMYTGQARYIDQMAQSLIAAADKYQLDRLKVMCEQALCYQLTTENACLTLVLA--DMYSAAQ-LRAHAINFINVNAAEVMSSEGWHGLVRDHPKLLEEVF 432
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: A0A7R8CRD4_LEPSM (SPOP n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CRD4_LEPSM)

HSP 1 Score: 113 bits (282), Expect = 3.340e-25
Identity = 80/236 (33.90%), Postives = 121/236 (51.27%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDET-GLHEIGDGGLILSMRAKIAMKGW-IPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKF-EVVSSEGWKSFCKQSPLVALEVL 699
            WG+   +  DF  DE+ GL  + D  L L     +      I  Q +  Q   FK+ +C L+    GL  F+  +F+DV+L CQ  + F+CH+A+L+A S VF AMF H +M E + N V ++DV P VM  +L+F+Y G          DLLAA+ KY++  +K  CE+ L +SL      V ++L    LH   E L   A+  +N +   +V+ + GWK     +P +  E  
Sbjct:  159 WGFKKIIRRDFLLDESNGL--LPDDKLTLFCEVSVVADSVNISGQSNAVQ---FKVPDCRLSEDFNGL--FESAQFADVTLACQGRE-FKCHKALLTARSQVFAAMFEH-DMEESKHNRVEVKDVDPDVMADMLRFIYTGRANNLENMAADLLAAADKYALDRLKVSCEEALCNSL--TVENVSEILILADLHS-AEQLKAQAIDFINTRHVTDVMETAGWKQMVSTNPHLIAEAF 382
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: G0MKI2_CAEBE (CBN-BATH-43 protein n=2 Tax=Caenorhabditis TaxID=6237 RepID=G0MKI2_CAEBE)

HSP 1 Score: 111 bits (278), Expect = 1.740e-24
Identity = 79/238 (33.19%), Postives = 115/238 (48.32%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDETGLHEIGDGGLILSMRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQE-----QTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVALEVL 699
            WG+  F+  DF  DE      GD   I    + +A    I  Q +++Q   FK+  C L+     L  F   +FSD +L+C+ +     QTF  H+AILSA S VF AMF H +M E  TN  T+ D++P VM  LL +MY G  +        L+AA+ KY +  +K  CEQ L   L    + +  +LA       L      A+  +N    E++++EGW  F +  P +  EV 
Sbjct:  176 WGFKKFIRRDFLLDEANGLLPGDRLSIFCEVSVVAETVNITGQTNVSQ--LFKVPPCRLSEDMNEL--FDKKQFSDFTLICKSDSGGSPQTFYIHKAILSARSRVFAAMFEH-HMQESDTNMTTVDDIEPEVMRELLVYMYTGQAKYIDQMAQSLIAAADKYQLDRLKVMCEQSLCYQLTTENACLTLMLADMYSAGQLRA---HAINFINVNAQEIMTTEGWHEFVRDHPKLLEEVF 405
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: V4ABW3_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4ABW3_LOTGI)

HSP 1 Score: 95.9 bits (237), Expect = 4.690e-19
Identity = 74/230 (32.17%), Postives = 111/230 (48.26%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDETGLHEIGDGGLI----LSMRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSP 678
            WG+  F+  DF  DE         GL+    L++  ++++ G        +     K+ EC+L++    L  F+    SDV ++C   + F+ H+AILSA SPVF+AMF H  M E + N V I D    VM  +L+F Y G          +LLAA+ KY+++ +K  CE  L SSL      V  +L    LH   + L   A+  +N    +V+ + GWKS     P
Sbjct:  131 WGFKKFIRRDFLMDEAN-------GLLPDDKLTIFCEVSVVGDTINISGQSNCTPVKVPECKLSNDLGSL--FERSLASDV-ILCVNGKEFQAHKAILSARSPVFQAMFEHE-MEESKQNRVEITDQDHEVMREMLRFTYTGKAPNLDKMADELLAAADKYALERLKVMCEDALYSSL--TVENVCDILVLADLHS-ADQLKTHAVDFINSHATDVMDTMGWKSMVSTHP 346
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: A0A814HHG1_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814HHG1_9BILA)

HSP 1 Score: 94.7 bits (234), Expect = 5.550e-19
Identity = 79/237 (33.33%), Postives = 120/237 (50.63%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDET-GLHEIGDGGLILSMRAKIAMKGW-IPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELD--LLAASQKYSVQYIKKQCEQWLVSSLE-DNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVALEV 696
            WG+  F+  DF  DE  GL  + D  L L     +      I  Q  LN    FKI EC L+     L +  +  +SDV+LVC Q++ F  H+A+LSA S VF+AMF H  M E + + V I+D+   +M  +L+F+Y G  +    D+L   LL A+ KY +  +K QCE+ L + ++ DN   V   L    LH   + L   A+  +N    +V+ + G+K+     P +  +V
Sbjct:   67 WGFKKFIRRDFLIDEANGL--LPDDKLTLFCEVSVVADSINISGQTQLNP---FKIPECRLSDDF--LVLLDNPVYSDVTLVCGQKE-FPVHKALLSARSRVFQAMFEHK-MLENERSRVEIEDIDGDIMLEILRFIYTG--KTHNIDKLADALLPAADKYCLDRLKVQCEETLCTIIDKDN---VADTLILADLHSAQQ-LRQQAIDFINTHPQDVLDTIGFKTMISTHPHLLADV 288
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: A0A814GD21_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814GD21_9BILA)

HSP 1 Score: 94.7 bits (234), Expect = 7.710e-19
Identity = 79/237 (33.33%), Postives = 120/237 (50.63%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDET-GLHEIGDGGLILSMRAKIAMKGW-IPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELD--LLAASQKYSVQYIKKQCEQWLVSSLE-DNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVALEV 696
            WG+  F+  DF  DE  GL  + D  L L     +      I  Q  LN    FKI EC L+     L +  +  +SDV+LVC Q++ F  H+A+LSA S VF+AMF H  M E + + V I+D+   +M  +L+F+Y G  +    D+L   LL A+ KY +  +K QCE+ L + ++ DN   V   L    LH   + L   A+  +N    +V+ + G+K+     P +  +V
Sbjct:   91 WGFKKFIRRDFLIDEANGL--LPDDKLTLFCEVSVVADSINISGQTQLNP---FKIPECRLSDDF--LVLLDNPVYSDVTLVCGQKE-FPVHKALLSARSRVFQAMFEHK-MLENERSRVEIEDIDGDIMLEILRFIYTG--KTHNIDKLADALLPAADKYCLDRLKVQCEETLCTIIDKDN---VADTLILADLHSAQQ-LRQQAIDFINTHPQDVLDTIGFKTMISTHPHLLADV 312
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: A0A8D8DND2_CULPI (Speckle-type POZ protein n=2 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8DND2_CULPI)

HSP 1 Score: 93.6 bits (231), Expect = 2.120e-18
Identity = 60/168 (35.71%), Postives = 97/168 (57.74%), Query Frame = 1 
Query:  202 MFKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVALEVLNE 705
            + +  +FSDV++V    + FR H+AIL+A SPVF AMF H NM E + N VTI D++P V + +L+F+Y G+++       +LLAA+ KY++ +++  CE+ L S+L    +   + L    LH   + L   A+R +     +V+  E WKS    +P VA ++  E
Sbjct:  172 LLESKKFSDVTVVVGSTE-FRVHKAILTARSPVFAAMFGH-NMQESKENRVTIDDIEPRVFQQVLRFIYTGVVKNLDHMACELLAAADKYALGHLRTICEENLGSTLSVESA--TKTLYLADLHH-ADQLKQQAIRFI-AGNIKVIQKEDWKSIIATNPEVAADMFAE 333
[Close]
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Match: B3S989_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S989_TRIAD)

HSP 1 Score: 93.6 bits (231), Expect = 2.940e-18
Identity = 76/246 (30.89%), Postives = 120/246 (48.78%), Query Frame = 1 
Query:    1 WGYPNFLSNDFSFDETGLHEIGDGGLILSMRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTM---FKDGEFSDVSLVCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVMEALLKFMYGGLLECEPGD-ELDLLAASQKYSVQYIKKQCEQWLVSSL-EDNPSYVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQ-SPLV--ALEVLNETTD 714
            WG+  F+  D   D+T        G +   R  +  +  I   P +  D +F  QE  +   ++   M   FK  +F+DV+    ++   + H+AILSA S VF AMF HS M E     + I D+   V E ++K++Y G       D  L++LAA+ KY +Q +K  CE  + ++L  DN +   +VL    +H+  E L    L+ +N    E+V +EG+K+  K  S L+  A   L  +TD
Sbjct:  123 WGFKKFVRRDMLMDKTS-------GFLTDNRLTLCCEINIVSDP-ITHDGRFTAQETNVPTCTLSQDMDQLFKTKKFADVTFNIGKDH-LKAHKAILSARSAVFDAMFKHS-MEEQHQARLDIPDIAADVFEEMIKYIYTGKEPSRMDDLALEMLAAADKYDLQRLKSLCENSISNNLIVDNAA---EVLVIADMHN-AEILKKNILKFINSYALEIVETEGYKNLLKNHSHLITDAFRTLARSTD 354
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1101.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3UVW6_HETAK7.950e-10269.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
E3LRZ3_CAERE1.010e-2734.87CRE-BATH-43 protein n=2 Tax=Caenorhabditis remanei... [more]
A8X9W5_CAEBR4.860e-2634.87Protein CBR-BATH-43 n=5 Tax=Caenorhabditis TaxID=6... [more]
A0A7R8CRD4_LEPSM3.340e-2533.90SPOP n=2 Tax=Lepeophtheirus salmonis TaxID=72036 R... [more]
G0MKI2_CAEBE1.740e-2433.19CBN-BATH-43 protein n=2 Tax=Caenorhabditis TaxID=6... [more]
V4ABW3_LOTGI4.690e-1932.17Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A814HHG1_9BILA5.550e-1933.33Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A814GD21_9BILA7.710e-1933.33Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A8D8DND2_CULPI2.120e-1835.71Speckle-type POZ protein n=2 Tax=Culex pipiens Tax... [more]
B3S989_TRIAD2.940e-1830.89Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1101contigH-akashiwo_Contig1101:84863..85710 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog31234.CRE25216
Preferred nameSPOPL
PFAMsBTB,MATH
Model size848
Max annot lvl33208|Metazoa
KEGG koko:K10523
KEGG Pathwayko04340,ko04341,map04340,map04341
KEGG ModuleM00384
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000151,GO:0000209,GO:0001085,GO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0001932,GO:0001934,GO:0002009,GO:0003002,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006515,GO:0006807,GO:0006950,GO:0007163,GO:0007164,GO:0007275,GO:0007350,GO:0007365,GO:0007367,GO:0007389,GO:0007423,GO:0008134,GO:0008150,GO:0008152,GO:0008589,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009880,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0016567,GO:0016604,GO:0016607,GO:0019005,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0023051,GO:0023056,GO:0023057,GO:0030162,GO:0030163,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031461,GO:0031463,GO:0031625,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032446,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032991,GO:0033157,GO:0033500,GO:0033554,GO:0035282,GO:0035966,GO:0035967,GO:0036211,GO:0042067,GO:0042221,GO:0042306,GO:0042308,GO:0042325,GO:0042327,GO:0042592,GO:0042593,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043410,GO:0043412,GO:0043433,GO:0043632,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045879,GO:0045892,GO:0045934,GO:0045937,GO:0046328,GO:0046330,GO:0046822,GO:0046823,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048729,GO:0048731,GO:0048749,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051090,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051223,GO:0051224,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051603,GO:0051716,GO:0051788,GO:0051865,GO:0060255,GO:0060341,GO:0060429,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070302,GO:0070304,GO:0070647,GO:0070887,GO:0071218,GO:0071310,GO:0071630,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0090596,GO:1900180,GO:1900181,GO:1901044,GO:1901564,GO:1901565,GO:1901575,GO:1902235,GO:1902237,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903827,GO:1903828,GO:1904035,GO:1904037,GO:1904589,GO:1904590,GO:1904950,GO:1905897,GO:1905898,GO:1990234,GO:2000112,GO:2000113,GO:2000674,GO:2000676,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244
Exons1
Evalue2.08e-24
EggNOG OGsKOG1987@1|root,KOG1987@2759|Eukaryota,38DSA@33154|Opisthokonta,3BFGK@33208|Metazoa,3CR5U@33213|Bilateria,40BJW@6231|Nematoda,1KUVI@119089|Chromadorea,40T78@6236|Rhabditida
Ec32 ortholog descriptionBTB/Kelch-associated
Ec32 orthologEc-11_001220.1
Descriptionmeprin and TRAF homology
Cds size678
COG categoryD
BRITEko00000,ko00001,ko00002,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387082.7699585-UTR-H-akashiwo_Contig1101:84862..849491681387082.7699585-UTR-H-akashiwo_Contig1101:84862..84949Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1101 84863..84949 +
1681387082.7897246-UTR-H-akashiwo_Contig1101:85627..857101681387082.7897246-UTR-H-akashiwo_Contig1101:85627..85710Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1101 85628..85710 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387082.7808535-CDS-H-akashiwo_Contig1101:84949..856271681387082.7808535-CDS-H-akashiwo_Contig1101:84949..85627Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1101 84950..85627 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1101.1.1prot_H-akashiwo_Contig1101.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1101 84950..85627 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1101.1.1

>prot_H-akashiwo_Contig1101.1.1 ID=prot_H-akashiwo_Contig1101.1.1|Name=mRNA_H-akashiwo_Contig1101.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=226bp
MRAKIAMKGWIPRQPHLNQDHKFKIQECELAHSSVGLTMFKDGEFSDVSL
VCQQEQTFRCHRAILSAWSPVFKAMFSHSNMAEGQTNEVTIQDVKPSVME
ALLKFMYGGLLECEPGDELDLLAASQKYSVQYIKKQCEQWLVSSLEDNPS
YVPQVLAFTSLHDDLECLHYAALRCLNEKKFEVVSSEGWKSFCKQSPLVA
LEVLNETTDKFEKGGSVESCKCWEK*
back to top

mRNA from alignment at H-akashiwo_Contig1101:84863..85710+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1101.1.1 ID=mRNA_H-akashiwo_Contig1101.1.1|Name=mRNA_H-akashiwo_Contig1101.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=848bp|location=Sequence derived from alignment at H-akashiwo_Contig1101:84863..85710+ (Heterosigma akashiwo CCMP452)
TGGGGTTATCCTAATTTTCTGTCTAACGATTTCAGCTTTGACGAAACTGG
CCTCCATGAGATTGGAGACGGGGGCCTGATCTTGAGCATGAGAGCAAAGA
TTGCAATGAAGGGGTGGATACCTCGGCAGCCCCACCTTAACCAGGACCAC
AAGTTTAAGATTCAAGAATGTGAGCTAGCCCACAGTTCCGTCGGCCTTAC
AATGTTTAAAGATGGCGAATTCAGTGATGTTAGTCTTGTGTGCCAGCAAG
AACAGACCTTCAGATGTCACAGGGCCATCCTGTCTGCATGGTCCCCTGTT
TTCAAGGCAATGTTTTCCCACTCGAATATGGCTGAAGGCCAAACAAATGA
AGTGACAATCCAAGATGTCAAACCATCTGTTATGGAGGCTTTGTTAAAAT
TTATGTATGGTGGTCTTCTGGAGTGCGAGCCAGGAGATGAACTGGATCTT
CTTGCTGCTTCTCAAAAGTACAGTGTTCAGTATATAAAGAAGCAGTGTGA
GCAATGGCTGGTTAGTAGCCTTGAAGACAACCCTTCCTATGTGCCACAAG
TCTTGGCTTTCACAAGCTTACACGATGACCTGGAGTGCCTTCACTATGCC
GCTCTTCGGTGTTTGAACGAAAAAAAGTTTGAGGTCGTGTCAAGTGAAGG
GTGGAAATCTTTTTGCAAACAGTCACCTCTAGTTGCGCTTGAAGTTTTGA
ATGAAACTACGGATAAGTTTGAGAAGGGCGGTAGCGTGGAAAGTTGTAAG
TGCTGGGAAAAATGAAGATATCTTGCACACTCTCTATGGATGTGCTGCCA
ACACCACAAAGAGAATTATCAATGAGAGAAACAAAGAGAATTGTTTTC
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1101:84863..85710+

>mRNA_H-akashiwo_Contig1101.1.1 ID=mRNA_H-akashiwo_Contig1101.1.1|Name=mRNA_H-akashiwo_Contig1101.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=678bp|location=Sequence derived from alignment at H-akashiwo_Contig1101:84863..85710+ (Heterosigma akashiwo CCMP452)
ATGAGAGCAAAGATTGCAATGAAGGGGTGGATACCTCGGCAGCCCCACCT
TAACCAGGACCACAAGTTTAAGATTCAAGAATGTGAGCTAGCCCACAGTT
CCGTCGGCCTTACAATGTTTAAAGATGGCGAATTCAGTGATGTTAGTCTT
GTGTGCCAGCAAGAACAGACCTTCAGATGTCACAGGGCCATCCTGTCTGC
ATGGTCCCCTGTTTTCAAGGCAATGTTTTCCCACTCGAATATGGCTGAAG
GCCAAACAAATGAAGTGACAATCCAAGATGTCAAACCATCTGTTATGGAG
GCTTTGTTAAAATTTATGTATGGTGGTCTTCTGGAGTGCGAGCCAGGAGA
TGAACTGGATCTTCTTGCTGCTTCTCAAAAGTACAGTGTTCAGTATATAA
AGAAGCAGTGTGAGCAATGGCTGGTTAGTAGCCTTGAAGACAACCCTTCC
TATGTGCCACAAGTCTTGGCTTTCACAAGCTTACACGATGACCTGGAGTG
CCTTCACTATGCCGCTCTTCGGTGTTTGAACGAAAAAAAGTTTGAGGTCG
TGTCAAGTGAAGGGTGGAAATCTTTTTGCAAACAGTCACCTCTAGTTGCG
CTTGAAGTTTTGAATGAAACTACGGATAAGTTTGAGAAGGGCGGTAGCGT
GGAAAGTTGTAAGTGCTGGGAAAAATGA
back to top