mRNA_H-akashiwo_Contig11.67.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A7S4DGY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGY0_HETAK) HSP 1 Score: 168 bits (425), Expect = 6.790e-49 Identity = 78/100 (78.00%), Postives = 90/100 (90.00%), Query Frame = 2
Query: 5 DGVSKMQKLVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVETCPVRNFTLKFAKQARKW 304
D ++++LVR L +FDR+G+FH PVDP+GQG+P YREIIKNPMDLATI++K NK+YKSRKEVMLDIKLIWDNSLTFNKVETCPVR FTLKFAKQARKW
Sbjct: 49 DEEGRLRELVRWLRRFDRRGLFHFPVDPDGQGVPRYREIIKNPMDLATIEEKINNKEYKSRKEVMLDIKLIWDNSLTFNKVETCPVRTFTLKFAKQARKW 148
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A7S3Y388_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y388_HETAK) HSP 1 Score: 117 bits (293), Expect = 1.390e-29 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 2
Query: 134 MDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVETCPVRNFTLKFAKQARKW 304
MDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVETCPVRNFTLKFAKQARKW
Sbjct: 1 MDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVETCPVRNFTLKFAKQARKW 57
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A1R2BU12_9CILI (Bromo domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BU12_9CILI) HSP 1 Score: 82.4 bits (202), Expect = 2.440e-16 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 2
Query: 23 QKLVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVET 253
+ L++ L + D F PVDP+ GIP YR+IIKNPMD+ TI+ K KN KY++ ++ + DI+LIWDN TFNK E+
Sbjct: 19 KNLIKYLIEQDESIDFLYPVDPDKLGIPSYRKIIKNPMDICTIRTKIKNSKYETIEDTLKDIQLIWDNCRTFNKEES 95
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A1Y1ZN32_9PLEO (Uncharacterized protein (Fragment) n=1 Tax=Clohesyomyces aquaticus TaxID=1231657 RepID=A0A1Y1ZN32_9PLEO) HSP 1 Score: 75.1 bits (183), Expect = 1.290e-13 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 2
Query: 32 VRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFN 241
VR K F EPV+PE GIPHYR+ IKNPMDL+T++ K K Y++ ++ M D+ L+ DNS+TFN
Sbjct: 333 VRNTKKIKVAHAFKEPVNPEAMGIPHYRDFIKNPMDLSTMEAKLKEGNYENIRDFMADLDLVIDNSITFN 402
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: J9FTP1_9SPIT (Bromodomain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9FTP1_9SPIT) HSP 1 Score: 74.3 bits (181), Expect = 2.370e-13 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 2
Query: 23 QKLVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVE 250
++L+ + KF++ IFHEPVDPE G+P Y II+NPMD TIK + Y +E + D++L++DN L FN E
Sbjct: 623 KRLMNSIWKFNQSWIFHEPVDPERLGVPDYFNIIRNPMDFGTIKQRLNTNYYHRMQEFLDDMQLVFDNCLKFNGEE 698
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: F4QCV7_CAVFA (Ankyrin repeat-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QCV7_CAVFA) HSP 1 Score: 74.3 bits (181), Expect = 2.480e-13 Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 2
Query: 29 LVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFN-------KVETCPVRNFTLKFAK 289
+ Q+ K +FH PVDP G+P Y +IIKNPMDL T+K K N YK+ KE D++L++ N+LTFN K+ ++NF KF +
Sbjct: 506 IYTQIYKRKNAEVFHYPVDPVADGVPTYLDIIKNPMDLGTMKTKLDNGSYKTIKEFAADMRLMFINALTFNLDGTPIWKLAKSLLQNFNTKFGQ 599
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A7S3AY73_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY73_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 3.230e-13 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = 2
Query: 11 VSKMQKLVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNKVET 253
+S+++ +++ L F +PVDPE GIPHYR+IIK PMDL T+ ++ + KY E+ ++ LIW N++ FN E+
Sbjct: 58 LSRVKAILKSLNTNQSSICFRKPVDPEAMGIPHYRDIIKRPMDLQTVGERLEQGKYTKVSELRAELDLIWSNAVIFNTEES 138
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: B8LBW9_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBW9_THAPS) HSP 1 Score: 68.6 bits (166), Expect = 4.430e-13 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 2
Query: 29 LVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFN 241
L++ L+ + +F+ PVDP G+P Y E+IKNPMDL T+K + +N Y+S EV +DI L +DN++ +N
Sbjct: 2 LLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVDINLTFDNAMLYN 72
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A8J9SD39_9CHLO (Probable Bromodomain-containing protein 3 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SD39_9CHLO) HSP 1 Score: 73.6 bits (179), Expect = 4.460e-13 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 2
Query: 17 KMQKLVRQLTKFD-RQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNK 244
K+QK+++++ + + + F+EPVDP+ GIP YREII+NPMDL TI + +N Y S V D+ L+W N TFN+
Sbjct: 8 KVQKVLKKVMQHEIAESFFNEPVDPDALGIPEYREIIRNPMDLGTIARRLENGYYSSAAAVAQDVCLVWRNCHTFNE 84
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Match: A0A1R2CPR6_9CILI (Bromo domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CPR6_9CILI) HSP 1 Score: 72.8 bits (177), Expect = 5.040e-13 Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 2
Query: 11 VSKMQKLVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNKKYKSRKEVMLDIKLIWDNSLTFNK 244
+ + ++L++ L D F PV+PE GIP Y+EIIKNPMD+ TI K K KY + ++ DIKLIWDN TFN+
Sbjct: 15 LDQAERLIQYLINQDECVDFLYPVNPEKLGIPLYKEIIKNPMDMNTISIKIKQSKYSNIDLILEDIKLIWDNCRTFNQ 92 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.67.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.67.1 >prot_H-akashiwo_Contig11.67.1 ID=prot_H-akashiwo_Contig11.67.1|Name=mRNA_H-akashiwo_Contig11.67.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=96bp MQKLVRQLTKFDRQGIFHEPVDPEGQGIPHYREIIKNPMDLATIKDKFKNback to top mRNA from alignment at H-akashiwo_Contig11:2926634..2928119- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.67.1 ID=mRNA_H-akashiwo_Contig11.67.1|Name=mRNA_H-akashiwo_Contig11.67.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1486bp|location=Sequence derived from alignment at H-akashiwo_Contig11:2926634..2928119- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:2926634..2928119- >mRNA_H-akashiwo_Contig11.67.1 ID=mRNA_H-akashiwo_Contig11.67.1|Name=mRNA_H-akashiwo_Contig11.67.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=288bp|location=Sequence derived from alignment at H-akashiwo_Contig11:2926634..2928119- (Heterosigma akashiwo CCMP452)back to top |