mRNA_H-akashiwo_Contig11.49.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A6V1NXC2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NXC2_HETAK) HSP 1 Score: 193 bits (491), Expect = 4.280e-60 Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 2
Query: 242 MRRWPYRQIRSINGKVETLLCKVIQSQDNEEIEACKAKIELLQMKKIFVMMAATWKSNEAYKVLNLPAESLANEDSFSHMIEIALRCTIEEVNALVVKTG 541
M RWPYRQIRSINGKVETLLCK IQSQDNEEIEACKAKIELLQMKKIFVMMAATWKSNEAYKVLNLPAESLANEDSFSHMIEIALRCTIEEVNALVVKTG
Sbjct: 1 MNRWPYRQIRSINGKVETLLCKAIQSQDNEEIEACKAKIELLQMKKIFVMMAATWKSNEAYKVLNLPAESLANEDSFSHMIEIALRCTIEEVNALVVKTG 100
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A7S3UTA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA5_HETAK) HSP 1 Score: 59.7 bits (143), Expect = 9.970e-7 Identity = 30/93 (32.26%), Postives = 58/93 (62.37%), Query Frame = 2
Query: 131 HITTAKLQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVETLLCKVIQSQDN-EEIEACKAKIELLQMKKIFVMMAATW 406
HI L++ + LP+S+AA + G+S+ ++ C++ ++RWP+RQ+RS+ ++E L K + +I +IELL+ K++ V+ AA++
Sbjct: 28 HINIDLLENKFDLPLSEAASSLGLSMTKLKKICRKFNIKRWPHRQVRSLENEIEELEMKKRRPNVTCAKIAKLNRRIELLEKKRLIVVKAASF 120
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.160e-6 Identity = 24/85 (28.24%), Postives = 53/85 (62.35%), Query Frame = 2
Query: 149 LQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVETLLCKVIQSQDNEEIEACKAKIELLQMKKIFVMMAAT 403
L+ YH+P++ AA+ +S+ ++ C+++ ++RWP+RQ+ S+N + L K++ + D++ A +AK L+ K+ ++ A+
Sbjct: 18 LEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASDDKAAAALRAKAGPLRTKRELIIKTAS 102
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 1.630e-5 Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 125 SSHITTAKLQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVE--TLLCKVIQSQDNEEIEACKAKIELLQMKKIFVMMAAT 403
S +T L+ + PI + +K G+S +R C+++ ++RWPYRQIRS+N ++ LL + Q D + ++ ++ L KK + AAT
Sbjct: 103 SKRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQE---QLVSLHYKKQLICQAAT 194
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A0K9NYS2_ZOSMR (RWP-RK domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NYS2_ZOSMR) HSP 1 Score: 55.8 bits (133), Expect = 1.680e-5 Identity = 27/83 (32.53%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 134 ITTAKLQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVETLLCKVIQSQDNEEIEACKAKIELLQMKKI 382
+T ++ +L+HLPI++A+ + ++ C+RH ++RWPYR+++S + K+ L KV+++Q + A A++EL Q+K++
Sbjct: 202 LTLEEISTLFHLPIAQASINLQLCTTALKKACRRHGIKRWPYRKVKSADKKIAQLH-KVLKTQTGTD--ATLAEVELAQIKEV 281
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A7S0UET7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UET7_HEMAN) HSP 1 Score: 52.4 bits (124), Expect = 2.260e-5 Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 2
Query: 134 ITTAKLQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVETLLCKVIQSQDNEEIEACKAKIELLQMKK 379
I+ L+ HLP + AK G+ + + ++ C++H M RWPYR++RSI K+E+L E +IE L+ +K
Sbjct: 12 ISADVLKQYLHLPAKEVAKRLGLCLTSLKKVCRQHGMTRWPYRKLRSIEKKLESLQSSARDKDGGTSGEDVMRQIEALRSEK 93
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A1X6PE57_PORUM (RWP-RK domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PE57_PORUM) HSP 1 Score: 55.8 bits (133), Expect = 2.620e-5 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 2
Query: 125 SSHITTAKLQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVETLLCKVIQSQDNE 331
S +++ A L S +HLPI+ AAK G V ++ C+RH ++RWPYR++ SI+ +E + + + D E
Sbjct: 30 SKNLSIADLMSCFHLPINDAAKQLGTCVTVLKKQCRRHGVKRWPYRKLVSIDKLIEKMEKEQTTADDKE 98
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.120e-5 Identity = 30/95 (31.58%), Postives = 51/95 (53.68%), Query Frame = 2
Query: 125 SSHITTAKLQSLYHLPISKAAKTFGISVRTFQRHCKRHQMRRWPYRQIRSINGKVE--TLLCKVIQSQDNEEIEACKAKIELLQMKKIFVMMAAT 403
S +T L+ + PI +K G+S +R C+++ ++RWPYRQIRS+N ++ LL + Q D + ++ ++ L KK + AAT
Sbjct: 105 SKRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQGVDRQRLQE---QLVSLHYKKQLICQAAT 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig11.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig11.49.1 >prot_H-akashiwo_Contig11.49.1 ID=prot_H-akashiwo_Contig11.49.1|Name=mRNA_H-akashiwo_Contig11.49.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=171bp MHIEYLHMKSPEPSRAIESHNSSRKPDAPVGSSHITTAKLQSLYHLPISKback to top mRNA from alignment at H-akashiwo_Contig11:1799075..1799935+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig11.49.1 ID=mRNA_H-akashiwo_Contig11.49.1|Name=mRNA_H-akashiwo_Contig11.49.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=861bp|location=Sequence derived from alignment at H-akashiwo_Contig11:1799075..1799935+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig11:1799075..1799935+ >mRNA_H-akashiwo_Contig11.49.1 ID=mRNA_H-akashiwo_Contig11.49.1|Name=mRNA_H-akashiwo_Contig11.49.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=513bp|location=Sequence derived from alignment at H-akashiwo_Contig11:1799075..1799935+ (Heterosigma akashiwo CCMP452)back to top |