mRNA_H-akashiwo_Contig1094.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 430 bits (1106), Expect = 3.410e-150 Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 1
Query: 22 TPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA 669
TPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSD+DFCNDRVDGKSVTGYILFLGDAPIVWSSKL GAVTTSTVEAEYLALRSAVKDIMWLRSLL EMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFH+SYHLAKEQVSLGTIRMF+IKTHDQVADILTKALNA
Sbjct: 122 TPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNA 337
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 195 bits (495), Expect = 8.810e-54 Identity = 92/206 (44.66%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 49 DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALN 666
+A +RS+VGT+ W+A WT PE+A+++H L + +P A RYL T+ + + LGG L L A++DADFC++R G+S +G+ +FLG +PI+WSS++ VT +T EAEY++LR+AV D+MWL+ LL +G Q P+ EDN AC+ WAND V+K RH H+SYH KE V I + ++ T Q+AD+ TK L+
Sbjct: 778 EAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 160 bits (405), Expect = 9.170e-44 Identity = 83/203 (40.89%), Postives = 123/203 (60.59%), Query Frame = 1
Query: 61 YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 663
+RS++G+L+++A TRP++A AV +L R NP +H++A + RYLKGT++ + GG + L A+SDAD+ +DR D +SV+G +L L AP+VW + V ST EAEY+AL VK+ MW R LL +G Q T + EDN + A + R +H + YH +E++ G I + +I T +QVAD LTK L
Sbjct: 173 FRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.990e-43 Identity = 81/203 (39.90%), Postives = 121/203 (59.61%), Query Frame = 1
Query: 61 YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 663
+RS++G+L+++A TRP++A AV +L R NP +H++A + RYLKGT++ + G + L A+SDAD+ +DR D +SV+G +L L AP+VW + V ST E EY+AL VK+ MW R LL +G Q T + EDN + A + R +H + YH +E++ G I + +I T +QVAD LTK L
Sbjct: 93 FRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A2M4CK71_ANODA (Putative pol polyprotein (Fragment) n=2 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK71_ANODA) HSP 1 Score: 164 bits (416), Expect = 3.150e-43 Identity = 89/210 (42.38%), Postives = 124/210 (59.05%), Query Frame = 1
Query: 40 ELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 663
EL D + YRS+VG+L +VA RP++A +V L R P K + A +R RYL GT + SLRLGGD L AFSD+D+ D KS TGYILF G I W+S+ VT S++EAEY+AL ++++W R LL +MG Q PT + EDN C+++ ++KR++H ++ V I++ + T D ADILTKAL
Sbjct: 594 ELEDISKYRSVVGSLMYVATTARPDIAASVSVLGRCFEKPTEKDWVAAKRVIRYLIGTVNWSLRLGGDRDYTLEAFSDSDWAGDHTTRKSTTGYILFYGGGAIAWTSRRQNCVTLSSMEAEYIALGETCQEVIWTRRLLEDMGEVQKSPTLIQEDNQGCLKFITSERISKRSKHIDTKACFVRDLVKKKIIKLNYCPTEDMRADILTKAL 803
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A4Z0A525_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A525_9AGAM) HSP 1 Score: 155 bits (393), Expect = 6.050e-43 Identity = 82/199 (41.21%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 61 YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD---LVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADI 648
Y S+VG L + A TRP+L++AV +L + NP H+ A +R RY+KGT +L GGD V ++DAD ND +S++GY FL PI WSSK V ST AEYLA+ A K+ +WLRSLL E+ PQ PT + DN A + + + + + R +H + YH +E V G IR+ +I T + ADI
Sbjct: 100 YASIVGALMYAAMATRPDLSYAVQRLSQFMSNPGIAHYAAAKRVLRYVKGTLDLALVYGGDDGPWVPIGYADADHANDLDSRRSISGYAFFLSGTPISWSSKKQPTVADSTAVAEYLAIAHATKEALWLRSLLGELDFPQDSPTLIHCDNQASIAMSKEQVFHARTKHVDIKYHFIREHVDRGQIRLEYIPTAENTADI 298
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A6B9KLA8_9VIRU (Gag-Pol polyprotein n=2 Tax=Atrato Retro-like virus TaxID=2689360 RepID=A0A6B9KLA8_9VIRU) HSP 1 Score: 164 bits (415), Expect = 6.330e-43 Identity = 89/210 (42.38%), Postives = 124/210 (59.05%), Query Frame = 1
Query: 40 ELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 663
EL D + YRS+VG+L +VA RP++A +V L R P K + A +R RYL GT + SLRLGGD L AFSD+D+ D KS TGYILF G I W+S+ VT S++EAEY+AL ++++W R LL +MG Q PT + EDN C+++ ++KR++H ++ V I++ + T D ADILTKAL
Sbjct: 1148 ELEDISKYRSVVGSLMYVATTARPDIAASVSVLGRCFEKPTEKDWVAAKRVIRYLIGTVNWSLRLGGDRDYTLEAFSDSDWAGDHTTRKSTTGYILFYGGGAIAWTSRRQNCVTLSSMEAEYIALGETCQEVIWTRRLLEDMGEIQKSPTLIQEDNQGCLKFITSERISKRSKHIDTKACFVRDLVEKKIIKLNYCPTEDMRADILTKAL 1357
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A507DL48_9FUNG (Uncharacterized protein n=3 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DL48_9FUNG) HSP 1 Score: 153 bits (386), Expect = 3.190e-42 Identity = 81/210 (38.57%), Postives = 130/210 (61.90%), Query Frame = 1
Query: 61 YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV-LRAFSDADFCNDRVDGKSVTGYILFLGDA-PIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQH-----EPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA 669
YR +VG+L ++ + P++A AV L R NP P+H +A +R RYL+GT + SL +GG+ V L +SDAD+ N+ +D +S+TGY+ +G+A P+ W+SK V S+ EAEY+AL A ++ +WLRSLL ++ P++ PT + EDN +C+ A + + + R +H + +H ++ V I + ++ T + VAD LTK L A
Sbjct: 35 YREIVGSLMYLMICSYPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETIWLRSLLRKLQIPEYLNESARPTTIYEDNQSCISLAMNPVHHARTKHIDIRHHFIRDHVD-KEIHLEYLPTAEMVADSLTKPLPA 243
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A8D8ANK3_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8ANK3_CULPI) HSP 1 Score: 156 bits (395), Expect = 4.230e-42 Identity = 85/216 (39.35%), Postives = 125/216 (57.87%), Query Frame = 1
Query: 28 GFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA 669
G +L+D Y S++G+L +++ TRP++A +V L R P + +R RYL T L LGG D L +SDAD+ D D KS +GY+ LG A + W+SK G V+TST+EAEY+AL A +D +WLRSLL ++ Q PT + EDN +C+++A KR++H YH +E TI++ + + D +ADILTK L +
Sbjct: 185 GSSKKLADNQEYHSLIGSLLYLSTHTRPDIAASVGILSRKVSCPSQLDWTEARRILRYLISTADHRLVLGGAEDFKLVGYSDADWAGDSADRKSCSGYLFRLGGATVNWTSKKQGCVSTSTMEAEYVALSQAAQDAVWLRSLLEDINEKQLRPTVIFEDNRSCLDFAALDQQKKRSKHIDTRYHYTRELCLNNTIKLEYCASEDMIADILTKPLGS 400
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Match: A0A2I0W4P1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W4P1_9ASPA) HSP 1 Score: 155 bits (393), Expect = 5.950e-42 Identity = 80/207 (38.65%), Postives = 125/207 (60.39%), Query Frame = 1
Query: 49 DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDADFCNDRVDGKSVTGYILFLGDAPIVWSSKLPGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHMSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALN 666
D LYR +VG+L ++ TRP++ +AV+K + P +F+A++R RY+KGT + L L L +F D+D+ D+ D KS TGY FLG + + W K + S+ EAEY AL +A D++W+R LL E+GCPQ+ PT + DN++ + AN+ + + R +H + H +E + +I++ I T DQ+ADI TKAL+
Sbjct: 161 DPLLYRQLVGSLQYLT-LTRPDITYAVNKACQFMHQPTDANFDALKRILRYIKGTLNIGLPLSRHSFDLSSFVDSDWTGDQKDRKSTTGYCTFLGRSLVTWCVKKQSTIARSSTEAEYRALAAAAADLIWIRQLLHELGCPQNNPTKLFCDNTSAIALANNPVFHARTKHIEVDCHYIRECIKNNSIQVHHISTKDQIADIFTKALS 366 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1094.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1094.10.1 >prot_H-akashiwo_Contig1094.10.1 ID=prot_H-akashiwo_Contig1094.10.1|Name=mRNA_H-akashiwo_Contig1094.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=223bp HCGSHAYTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQback to top mRNA from alignment at H-akashiwo_Contig1094:382769..383437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1094.10.1 ID=mRNA_H-akashiwo_Contig1094.10.1|Name=mRNA_H-akashiwo_Contig1094.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=669bp|location=Sequence derived from alignment at H-akashiwo_Contig1094:382769..383437+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1094:382769..383437+ >mRNA_H-akashiwo_Contig1094.10.1 ID=mRNA_H-akashiwo_Contig1094.10.1|Name=mRNA_H-akashiwo_Contig1094.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=669bp|location=Sequence derived from alignment at H-akashiwo_Contig1094:382769..383437+ (Heterosigma akashiwo CCMP452)back to top |