mRNA_H-akashiwo_Contig1093.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A6T5NAE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NAE1_HETAK) HSP 1 Score: 526 bits (1356), Expect = 6.340e-188 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 3
Query: 87 MLSVIIRSVMILLLAALGKASALNVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGADVSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRRS 926
MLSVIIRSVMILLLAALGKASALNVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGADVSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRRS
Sbjct: 1 MLSVIIRSVMILLLAALGKASALNVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGADVSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRRS 280
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A1Z5KSI1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSI1_FISSO) HSP 1 Score: 335 bits (859), Expect = 2.770e-112 Identity = 170/257 (66.15%), Postives = 196/257 (76.26%), Query Frame = 3
Query: 156 NVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGADVSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRRS 926
NVI VGGSSGM GG VLLVSRS++KLE AR +L SIA +D++DE V+ F TL WD LV++AAG+APH PV TL T+ R ++++K+W AYHCAKH P L + GA+ AGILNRRPG+NCAPLAMANGALEGLTRTLALEW P+LRVNCLSPGFCDTERFDHM RK M+ +TA+SLPLQKVGQPSDMG+AIYYLLTAPFCTGV+LDVDGGHGIRQYANPM DPMRR+
Sbjct: 32 NVIIVGGSSGMGLAAARQVLQHGGHVLLVSRSVSKLERARDQLACP---ERTSIAAMDITDESQVQAF--TLPPLD---WDGLVITAAGRAPHEPVLTLETNHARTLLDSKLWGAYHCAKHWSPHLCDDGAVVLCAGILNRRPGVNCAPLAMANGALEGLTRTLALEWAPRLRVNCLSPGFCDTERFDHMDPSRKHAMLEHTASSLPLQKVGQPSDMGEAIYYLLTAPFCTGVVLDVDGGHGIRQYANPMNDPMRRN 280
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A448ZFF2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFF2_9STRA) HSP 1 Score: 326 bits (836), Expect = 2.890e-108 Identity = 165/273 (60.44%), Postives = 193/273 (70.70%), Query Frame = 3
Query: 153 LNVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGADVSIAD--------------LDVSDEGAVEKFAETLRE-SSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRRS 926
+N+I VGGSSGM GGK L+VSRS KL A +E+ + P D S D LD SDE AVE F++TL E+WD LV+SAAG APHG +E L TS TR + E+K W+AYHCAK++GP L EG + FVAG+LNRRPG NC PLA NGALEGLTR+LALEWGP+LRVNCLSPGFCDTERFD M +RKE M++NTA SLPL++ G P DMG+ IYYLLTA FCTGV+LDVDGGHGIRQYAN DPMR+S
Sbjct: 40 INIIVVGGSSGMGKAAAIACVKRGGKALIVSRSEEKLARAAEEIQSYAPQRDTSCEDSDDESTASMVTTAVLDASDEEAVELFSKTLPSVMGDETWDGLVISAAGSAPHGAMEELETSKTRDLFESKFWSAYHCAKYIGPKLSEGSGVVFVAGVLNRRPGKNCVPLASTNGALEGLTRSLALEWGPRLRVNCLSPGFCDTERFDRMDPERKEAMLANTADSLPLKRTGVPEDMGEGIYYLLTAGFCTGVVLDVDGGHGIRQYANAQSDPMRQS 312
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A7S2Y9I8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9I8_9STRA) HSP 1 Score: 321 bits (823), Expect = 2.210e-106 Identity = 175/303 (57.76%), Postives = 216/303 (71.29%), Query Frame = 3
Query: 78 IRRMLSVIIRSVMILLLAALGKASALNVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGAD---------VSIADLDVSDEGAVEKFAETLRESSTES----WDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLL----QEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGP----KLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRR 923
I ++LS+ + V L LA+ +++ NVI +GGSSGM GG+VLLVSRS+ KL++A++EL+ + + +A +DV++E V A + + S W+ LV++AAG+A HG VE+L + D R MME+K+W AY+CAKHLG L ++G AI F AGI+NRRPGLNCAPLAMANGALEGLTRTLALE G ++RVNCLSPGFCDTERF+HM RK+QMM NTAASLPLQKVGQP DMGQAIYYLLTAPFCTGVILDVDGGHGIRQYAN KDPMR+
Sbjct: 7 ILQLLSLPLFLVYSLALASSPTSASRNVIVIGGSSGMGKAAAFEVLSHGGRVLLVSRSMEKLKNAKKELMVAISSTGEGKEDVEDLIHLASVDVTNEDQVAALAASQMPTDDNSASIPWNGLVITAAGRAAHGSVESLSSGDARDMMESKLWGAYYCAKHLGTKLDTSSEDGAAIVFCAGIINRRPGLNCAPLAMANGALEGLTRTLALELGTSTQGRIRVNCLSPGFCDTERFNHMDPTRKQQMMENTAASLPLQKVGQPQDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANAQKDPMRQ 309
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A8J2WUW4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUW4_9STRA) HSP 1 Score: 317 bits (813), Expect = 2.160e-105 Identity = 165/274 (60.22%), Postives = 205/274 (74.82%), Query Frame = 3
Query: 120 LLLAALGKASALN---VICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGAD---VSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRR 923
L+LA + A+A+ I VGGSSGM GG LLVSRS KL+ AR+E++ + GAD V A +D +DE +V FA L + +S+DALVVSAAG+APHGPV L +D R MM++K WTA+HCAKH+ P+L +GG+I FVAG+LNRRPG NCAPLA NGALEGLTR+LAL+ GP+LRVNC+SPGFCDTERFDHM +RK M++NTAASLPLQ+VG+P+DMG AI+YL +A F TGV+LDVDGGHG+RQYA+ DPMRR
Sbjct: 3 LVLAWIAAATAMTPQRAIVVGGSSGMGKAAAKQFVKNGGHALLVSRSADKLQRAREEIMRET-GADAYAVDTAAVDATDEASVAAFAAGL---APDSYDALVVSAAGRAPHGPVAELDVADARGMMDSKFWTAWHCAKHVAPVLADGGSITFVAGVLNRRPGKNCAPLAATNGALEGLTRSLALDLGPRLRVNCMSPGFCDTERFDHMDTERKAAMLANTAASLPLQRVGEPADMGAAIHYLASAQFVTGVVLDVDGGHGVRQYADAATDPMRR 272
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A7S1Z6C0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z6C0_TRICV) HSP 1 Score: 318 bits (815), Expect = 5.210e-105 Identity = 162/268 (60.45%), Postives = 193/268 (72.01%), Query Frame = 3
Query: 156 NVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVP------GAD--VSIADLDVSDEGAVEKFAETLR---ESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRRS 926
NVI VGGSSGM GG+ L+ RS +L+ A +E+ + V GA+ V LD SDE VE+FA LR + WD LVVSAAG APHGPV +L TS TR + +TK W+AYHCAKH+ PLL++GG++ FVAG+LNRRPG+NCAPLA NGALEGLTR LALE+GP+LRVNCLSPGFCDTERFD M RK M++NTA SLPL KVG+P DMG+AIYYLLTA F TG +LDVDGGHG+RQYAN DPMR++
Sbjct: 47 NVIVVGGSSGMGKAAAVAAVRRGGRALIAGRSEERLQRAAEEIRSYVSPEEDGDGAEDRVRTVVLDASDESEVERFAALLRGEGKDGESEWDGLVVSAAGPAPHGPVTSLETSKTRGLFDTKFWSAYHCAKHVSPLLRDGGSVAFVAGVLNRRPGINCAPLAATNGALEGLTRALALEFGPRLRVNCLSPGFCDTERFDRMDPDRKAAMLANTAESLPLGKVGRPEDMGEAIYYLLTAGFVTGTVLDVDGGHGVRQYANAANDPMRKT 314
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A7S4RXA8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RXA8_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.220e-104 Identity = 154/241 (63.90%), Postives = 190/241 (78.84%), Query Frame = 3
Query: 222 GGKVLLVSRSLTKLESARQELLTQVPG-------ADVSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRR 923
GG L+VSRS KLE A +E++++ VS A LD SDE AVE+F + + + E WD LV SAAG+APHGP++ L TS T+ +M+ K W AYHCAKH+ P L++GGA FV+G+LNRRPG+NC+PLA NGALEGLTR+LALE+GP++RVNC+SPGFCDTERFDHM A+RK+ M+ NTA SLPL++VGQPSDMG+AIYYLLTAPF TGV+LDVDGGHGIRQYANP DPMR+
Sbjct: 5 GGNALIVSRSPEKLEKASKEIISKAAANACCEKIGIVSTAILDASDESAVEEFICSTQVMNGE-WDGLVFSAAGRAPHGPIDKLDTSLTKELMDIKFWGAYHCAKHIVPKLRDGGACVFVSGVLNRRPGINCSPLACTNGALEGLTRSLALEFGPRIRVNCMSPGFCDTERFDHMDAERKKAMLENTADSLPLKRVGQPSDMGEAIYYLLTAPFVTGVVLDVDGGHGIRQYANPNSDPMRK 244
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: R1B6I3_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B6I3_EMIHU) HSP 1 Score: 310 bits (794), Expect = 2.820e-102 Identity = 149/255 (58.43%), Postives = 188/255 (73.73%), Query Frame = 3
Query: 156 NVICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGADVSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMR 920
+ I +GGSSGM GG VLL SR+ +L+SA ++ +VP A ++ LD DE AV+ F E L WDAL+ +AAG+APHGP+ L T+DT + ++K WTA++ KHL P L +GGA+ AG+LNRRPG+NC+PLA NGALEGLTR LALE+GP+LRVNCLSPGFCDTERFDHMPA+RK M++NTAASLPL++VG PSDMG+A+YYL++APF TGV+LD DGGH IRQYA+ DPMR
Sbjct: 18 SAIVIGGSSGMGRAAAIAVASRGGSVLLASRTQARLDSAADDIRREVPDAQLTTRVLDARDEAAVKAFGEELEGR----WDALICTAAGRAPHGPIGELDTADTAALFDSKFWTAHNVCKHLAPRLADGGAVALTAGLLNRRPGMNCSPLAAVNGALEGLTRALALEFGPRLRVNCLSPGFCDTERFDHMPAERKAAMLANTAASLPLRRVGAPSDMGEALYYLVSAPFVTGVVLDCDGGHHIRQYADASSDPMR 268
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A7R9WXI9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WXI9_9STRA) HSP 1 Score: 305 bits (780), Expect = 7.560e-102 Identity = 141/176 (80.11%), Postives = 155/176 (88.07%), Query Frame = 3
Query: 396 DALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDPMRR 923
D LV+SAAGKAPHGP+ +L TSD R MMETKVWTAYHCAKH+ L EGG++ FVAGILNRRPG+NC+PLAMANGALEGLTR+LALEWGP+LRVNCLSPGFCDTERFDH+ +RK M +NTA SLPLQKVGQPSDMG AIYYL TAPF TGVILDVDGGHGIRQYANP DPMR+
Sbjct: 1 DGLVISAAGKAPHGPMTSLATSDARDMMETKVWTAYHCAKHISVKLNEGGSVTFVAGILNRRPGMNCSPLAMANGALEGLTRSLALEWGPRLRVNCLSPGFCDTERFDHLSEERKASMFANTAGSLPLQKVGQPSDMGDAIYYLATAPFTTGVILDVDGGHGIRQYANPQNDPMRK 176
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Match: A0A7S3ZSS3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSS3_9STRA) HSP 1 Score: 311 bits (797), Expect = 1.500e-101 Identity = 162/271 (59.78%), Postives = 202/271 (74.54%), Query Frame = 3
Query: 120 LLLAALGKASALN---VICVGGSSGMXXXXXXXXXXXGGKVLLVSRSLTKLESARQELLTQVPGAD---VSIADLDVSDEGAVEKFAETLRESSTESWDALVVSAAGKAPHGPVETLPTSDTRLMMETKVWTAYHCAKHLGPLLQEGGAICFVAGILNRRPGLNCAPLAMANGALEGLTRTLALEWGPKLRVNCLSPGFCDTERFDHMPAQRKEQMMSNTAASLPLQKVGQPSDMGQAIYYLLTAPFCTGVILDVDGGHGIRQYANPMKDP 914
L+LA + A+A+ I VGGSSGM GG LLVSRS KL+ AR+E++ + GAD V A +D +DE +V FA L + +S+DALVVSAAG+APHGPV L +D R MM++K WTA+HCAKH+ P+L +GG+I FVAG+LNRRPG NCAPLA NGALEGLTR+LAL+ GP+LRVNC+SPGFCDTERFDHM +RK M++NTAASLPLQ+VG+P+DMG AI+YL +A F TGV+LDVDGGHG+RQYA+ DP
Sbjct: 3 LVLAWIAAATAMTPQRAIVVGGSSGMGKAAAKQFVKNGGHALLVSRSADKLQRAREEIMRET-GADAYAVDTAAVDATDEASVAAFAAGL---APDSYDALVVSAAGRAPHGPVAELDVADARGMMDSKFWTAWHCAKHVAPVLADGGSITFVAGVLNRRPGKNCAPLAATNGALEGLTRSLALDLGPRLRVNCMSPGFCDTERFDHMDTERKAAMLANTAASLPLQRVGEPADMGAAIHYLASAQFVTGVVLDVDGGHGVRQYADAATDP 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1093.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1093.5.1 >prot_H-akashiwo_Contig1093.5.1 ID=prot_H-akashiwo_Contig1093.5.1|Name=mRNA_H-akashiwo_Contig1093.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=281bp MLSVIIRSVMILLLAALGKASALNVICVGGSSGMGKASALEVVRNGGKVLback to top mRNA from alignment at H-akashiwo_Contig1093:229793..230721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1093.5.1 ID=mRNA_H-akashiwo_Contig1093.5.1|Name=mRNA_H-akashiwo_Contig1093.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=929bp|location=Sequence derived from alignment at H-akashiwo_Contig1093:229793..230721+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1093:229793..230721+ >mRNA_H-akashiwo_Contig1093.5.1 ID=mRNA_H-akashiwo_Contig1093.5.1|Name=mRNA_H-akashiwo_Contig1093.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=843bp|location=Sequence derived from alignment at H-akashiwo_Contig1093:229793..230721+ (Heterosigma akashiwo CCMP452)back to top |