mRNA_H-akashiwo_Contig1091.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1091.2.1
Unique NamemRNA_H-akashiwo_Contig1091.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK)

HSP 1 Score: 375 bits (963), Expect = 2.480e-121
Identity = 212/540 (39.26%), Postives = 274/540 (50.74%), Query Frame = 1
Query:    1 MDLRGLNKITETVRFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVIT----------------------------------------------------------------------------------------------------------------------------------------------IQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKEN--------------------QYQRPRRK----------EEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARD 1104
            +DLR LN IT   +FPLPT REMFD LA +++++S+D  WAYWSVPLRE D++KT+FT+RNRKY + V+                                                                                                                                               + W DDCEW+FQ +KDSLTSAP L +P W K  ++ETDAS TGLGA+LLQ+T  G +PIAYASR CSP E NYSATE+ECLGVI+AL+ FRCYV+G  F LVTDH++L++LK +K P+GR ARWLMTL+E+ +   YR GKL   AD LSRLPRA  A+  KE                     Q ++  RK          +E +S T      +  E I++AQ+ED  CGPI++YL     +   S+E V  SRYM    G+LWH ++YQG+NRR GTR+Q+VVP  +   +LQWAH+GAFG H+GR+KA E L +GY+W NMARD
Sbjct:  151 LDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYRKGKLMAPADALSRLPRAG-AIQPKEGEADDENIVAAITRAQAGEAQQLKKQTRKRTRMVTEEEPQEKMSETEEKQLGIRPEDISKAQQEDEFCGPIMEYLKTPGGNKTVSREIVHWSRYMILEKGLLWHQYEYQGDNRRRGTRIQLVVPTALHEVMLQWAHQGAFGAHIGRDKALEILRQGYFWVNMARD 689          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK)

HSP 1 Score: 234 bits (596), Expect = 8.940e-69
Identity = 131/350 (37.43%), Postives = 167/350 (47.71%), Query Frame = 1
Query:    1 MDLRGLNKITETVRFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVIT----------------------------------------------------------------------------------------------------------------------------------------------IQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYR 624
            +DLR LN IT   +FPLPT REMFD LA +++++S+D  WAYWSVPLRE D++KT+FT+RNRKY + V+                                                                                                                                               + W DDCEW+FQ +KDSLTSAP L +P W K  ++ETDAS TGLGA+LLQ+T  G +PIAYASR CSP E NYSATE+ECLGVI+AL+ FRCYV+G  F LVTDH++L++LK +K P+GR ARWLMTL+E+ +   YR
Sbjct:  151 LDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIFGAAQIPFLGHLASREGLKPDPKKIEAVRKLRRPESKKQVRQLLGLASYYRQFVPNFASIAAPLYKLTKDKPKGVLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYR 500          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A4Y2JYH6_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2JYH6_ARAVE)

HSP 1 Score: 206 bits (525), Expect = 2.000e-57
Identity = 124/399 (31.08%), Postives = 202/399 (50.63%), Query Frame = 1
Query:    1 MDLRGLNKITETVRFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVIT------------IQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPII-KYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRR-------TGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTC 1137
            +D R LN+IT    +PLP   +  D L  S W+S++D +  YW V ++ +D+ KT+FT   R + +  I               WT++CE SF +LK +L ++P L +P   K  +++TDAS+ G+GAVL Q+       IAY S+S    E+NY  T  E L ++ +++ F  Y+ G +F L  DH +L+ L   ++P G++ARW+  L EYDFE+ +R G     AD LSR P  ++      N  ++   + +I    + ++ +  +  + +AQ EDP   PI+ + LN E  D  + QE V  S      W +    H   G   R       + +R Q+++P+    ++L+  H+ A G H G  K      E ++W  +  D+  + R C  C
Sbjct:  145 VDYRKLNEITIKDSYPLPRIDDTLDALNGSQWFSTLDLKSGYWQVEIQPEDKEKTAFTTGQRLWNFSAIARPLHKLTEARTNFNWTEECEKSFNSLKQALITSPVLTYPRTDKEFILDTDASNEGIGAVLSQKIGNEECVIAYFSKSLGKPERNYCVTRKELLTIVKSIEHFHHYLYGRKFLLRIDHASLRWLLNFREPEGQIARWIQRLQEYDFEIQHRKGTSHGNADALSRRPCKESC-KHCTNAEKKFGMETDISVKALTTEDAWSSSEVQKAQLEDPAIRPILERKLNSE--DRPSWQEIVPESPATKRFWALWDSLHLKDGVLYRKWESDDGSSSRWQLILPKSRIQEVLRETHDSASGGHFGVMKTLSKTRERFYWDRLRVDVEKWCRECHAC 540          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A1X7UNW9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UNW9_AMPQE)

HSP 1 Score: 197 bits (501), Expect = 3.110e-54
Identity = 116/318 (36.48%), Postives = 167/318 (52.52%), Query Frame = 1
Query:  199 KVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGR-QPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLP-RADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQF 1146
            K +  QWT  C+ +FQ LKD LTS P LA+PD+S   ++ TDAS  GLGAVL Q  + G   P+AYASR+ S  EKNY  TE+E LGV++ALK FR Y+ G +  + TDH  +K+L   K  SG++ARW   + EYD ++ YR G+ ++ AD LSR P +A T+    +           +   T+ +D   E   + R Q+ED   GPII  L +    G      V +   +  C G+            + G+ L++ VP + R ++L+  H G F  H      ++ L + YWW  M RD     + C TC  +
Sbjct:   97 KNVPFQWTGACQSAFQKLKDLLTSPPVLAYPDFSNPFILHTDASGEGLGAVLEQSNENGVCHPVAYASRTVSEHEKNYGITELEALGVVWALKHFRAYLWGHKTTVYTDHSPVKSLLRAKHTSGKLARWSQVVSEYDLDICYRPGRQNSNADALSRAPLQAGTSNDSLDT----------VQIATVTTDG--EMTELIRNQKEDEEFGPIITSLER----GNREPNFVLVEGVLYYC-GV------------KDGSPLRLCVPLLEREKLLKNIHSGTFAGHFSSRSVYKTLTKRYWWKGMYRDTQAHCKGCLTCATY 385          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A0J7KTY6_LASNI (RNA-directed DNA polymerase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KTY6_LASNI)

HSP 1 Score: 195 bits (496), Expect = 3.980e-54
Identity = 122/377 (32.36%), Postives = 188/377 (49.87%), Query Frame = 1
Query:   22 KITETVRFPLPTPREMFDQ-LANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK 1149
            K++  V +P P   +   Q L  + WY      ++  + PL       T  T +N ++ W         + + +F  LK +LTSAP LA PD+++  V++TDAS++GLGAVL Q  + G + IAYASR+ +  E+NYSATE+ECL +++ ++  + Y+ G  F +VTDHQ+LK L+ ++ PSGR+ARWL  L +YDF + YR G L+  AD LSR P A  A   +   Y R       L   +  DP         A+R D             + DG+  +  +                H    +   T ++ +  VP+  R ++LQ  H+     H+G  K    + E Y+WP M R++   +R+C  CQ  K
Sbjct:  174 KVSAVVNWPEPRSVKQVRQFLGMASWYRRFIANFSTLAAPL-------TRLTKKNARWTWGA-------EEDTAFYNLKKTLTSAPVLACPDFTRRFVLQTDASTSGLGAVLTQHFEAGERVIAYASRTLNGAERNYSATELECLAIVWGIRRMKDYLEGYTFTVVTDHQSLKWLQHLEAPSGRLARWLFELQQYDFNVKYRRGTLNRVADALSRQPEACAAAPLRCRWYHR-------LYDEVSRDP---------ARRPD-----------YRIEDGRLRRHIL----------------HSLNFKEDPTASQWKECVPKERRNELLQRYHDAPTAGHLGIAKTIARIAERYYWPGMLREITAHVRSCQKCQAHK 493          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A4Y2C826_ARAVE (RNA-directed DNA polymerase (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2C826_ARAVE)

HSP 1 Score: 197 bits (500), Expect = 1.120e-53
Identity = 123/425 (28.94%), Postives = 210/425 (49.41%), Query Frame = 1
Query:    1 MDLRGLNKITETVRFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRN------RKYCWKVITIQ------------------------------WTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPII-KYLNKE--VSDGKTSQETVALSRYMSSCW-------GILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTC 1137
            +D R LN+IT    +PLP   +  D L  S W+S++D +  YW V ++ +D+ KT+FT         R+Y    +++                               WT++CE SF +LK +L ++P L +P   K  +++TDAS+ G+GAVL Q+       IAY S+S    E+NY  T  + L ++ +++ F  Y+ G +F L+TDH +L+ L   ++P G++ARW+  L EYDFE+ +R G     AD LSR P  ++      N  ++   + +I    + ++ +  +  + +A+ EDP   PI+ + LN E   S  + + E+ A  RY +  W       G+L+   +   E+     R Q+++P+    ++L+  H+ A G H G  K      E ++W  +  D+  + R C  C
Sbjct:  124 VDYRKLNEITIKDSYPLPRIDDTLDALNGSQWFSTLDLKSGYWQVEIQPEDKEKTAFTTGQGLWQFKRQYTISEVSLDFAPITVVFVRNFSAIVRPLHKLTEARSNFNWTEECEKSFNSLKQALITSPVLTYPRTDKEFILDTDASNEGIGAVLSQKIGNEECVIAYFSKSLGKPERNYCVTRKKLLAIVKSIEHFHHYLYGRKFLLLTDHASLRWLLNFREPEGQIARWIQRLQEYDFEIQHRKGTSHGNADALSRRPCKESC-KHCTNAEKKFGMETDISVKVLTTEDAWSSSEVQKARLEDPAIRPILERKLNSEDRPSWQEIAPESPATKRYWA-LWDSLHLKDGVLYRKWESDDES---SCRWQLILPKSRIQEVLRETHDSASGGHFGVMKTLSKTRERFYWDRLRADVEKWCRECHAC 543          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A6G5ABY0_RHIMP (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ABY0_RHIMP)

HSP 1 Score: 196 bits (499), Expect = 1.130e-53
Identity = 113/317 (35.65%), Postives = 167/317 (52.68%), Query Frame = 1
Query:  199 KVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK 1149
            K +   WT +CE +F+ LK +LTS P L   D S    I TDAS  GLGAVL+Q  +     +AYASRS S  E+NY+ TE+ECL V+FA+  FR Y+ G RF ++TDH +L  L  ++ PSGR+ARW + L E+DF + Y+SG     ADCLSRLP   T    + + +      ++ ++      P +       AQ ED      + +L    +D  +S   V     +        +  +Y G+    G RL +VVP  +R QI ++ H+ A   H+G  + F  + + ++WP M RD   ++  C  CQ+ K
Sbjct:   11 KDVPFHWTPNCELAFKQLKFALTSGPILCHFDPSASTEIHTDASGVGLGAVLIQRHNNAEHVVAYASRSLSKAERNYTVTELECLAVVFAVHKFRPYIYGRRFSVITDHHSLCWLVSLRDPSGRLARWAIRLQEFDFTVRYKSGNRHADADCLSRLPLPTTEC--EADNF------DDFITAIDSHFPDIAA--FRTAQHEDHC----LDHLFASANDPASSSSFVVHDAVL--------YKKNYSGQ----GARLLLVVPRALRPQIFRFCHDNATSGHMGFARTFHRIQQRFYWPKMRRDTEKYVAGCEQCQRHK 301          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A023EXS9_TRIIF (RNA-directed DNA polymerase (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023EXS9_TRIIF)

HSP 1 Score: 197 bits (501), Expect = 2.710e-52
Identity = 132/388 (34.02%), Postives = 200/388 (51.55%), Query Frame = 1
Query:    1 MDLRGL----NKITETVRFPLP-TPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK 1149
            +D +GL    NK++  + FP P T R++   L  + WY      ++    PL       T    +++K  WK     W +  E  F+ LK+ L +AP L  PD+S+  +++TDASS+GLGA+L QE D G +PIA+ASRS +  EKN+S TE ECL V++A++ FR Y+ G+ F ++TDH+AL  LK +K P GR+ARW + + +Y F + +R G  +  AD LSR+                    EE +     S  +VE  + A+  RE  +   I +Y N  V +G    + VA +R            H+  G+        ++VVP+  R  IL   H+     H+G  K  + + E Y+WP MA D+  ++  CS CQQ K
Sbjct:  435 VDQQGLHVDPNKVSAILNFPQPKTVRQLRRFLGLASWYRRFVPHFSSVCAPL-------TELLKKHKK--WK-----WGESQEQGFKDLKEILVAAPVLTCPDFSRPFILQTDASSSGLGAILSQEFDEGEKPIAFASRSLTRNEKNFSTTEQECLAVMWAIEKFRPYLEGADFTVITDHRALVWLKNLKDPQGRLARWAIKMQQYQFSIKHRPGTQNAAADALSRVH-------------------EEPVGVINLSFEAVEPWY-AKMVRE--VKKNISRYPNWAVEEGNRLYKKVANAR------------HEIMGQEYAW----KLVVPKDQRRDILNEFHDSPLSGHLGGFKTLQRIKENYYWPGMAADVAKYVSRCSVCQQTK 770          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A5S6QHH5_TRIMR (Uncharacterized protein n=3 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QHH5_TRIMR)

HSP 1 Score: 196 bits (498), Expect = 8.250e-52
Identity = 127/383 (33.16%), Postives = 201/383 (52.48%), Query Frame = 1
Query:   28 TETV-RFPLPT-PREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWG-------ILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK 1149
            TE V  +P PT P+E+   L  + +Y      +A  + P+ +         +  +   W      WT +CE SF  LK  LTSAPTL+FPD++   V++TD+S+ GLGAVL Q  D     +AYASRS S  E+ YS T  E L +++A++ FR Y+ G +FR  TDH +L+ L+  K+P G+VARWL  L  Y+FE+ +R+G+    AD LSR+P  D     ++N         ++ S      P+V+ + + +AQR DP  G ++++  KE    ++        RY+    G       +L+          R  T   +V+P+ +  ++L+ AH+G  G H+G +K FE L   ++WPN   D+ ++  +C  C + K
Sbjct:  670 TEAVDNWPRPTSPKELKQFLGLASYYRRFVSSFATIAEPMNK---------LMKKSSRWN-----WTSECEASFHELKARLTSAPTLSFPDFNLPFVLDTDSSNCGLGAVLAQVVDGKEVVVAYASRSMSKAERRYSTTRQEMLALVWAVRHFRPYLYGKQFRARTDHNSLRWLQSFKEPEGQVARWLELLSSYNFEVEHRAGRKHGNADALSRVP--DYV---QKNSISIVNHLVKLRSWL----PNVDAQEMLQAQRSDPEIGTVLEWTEKESWPEQSPTGANRALRYLWCQKGQFSIRGRLLYRRWVPVLPPGRGVTTWLLVIPKSLIPRLLESAHDGPAGGHLGGKKTFEKLRRSFYWPNQREDVANWCESCEACARRK 1029          
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Match: A0A1B6K8D1_9HEMI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6K8D1_9HEMI)

HSP 1 Score: 192 bits (488), Expect = 7.090e-51
Identity = 118/374 (31.55%), Postives = 186/374 (49.73%), Query Frame = 1
Query:   22 KITETVRFPLP-TPREMFDQLANSWWYSSMDCRWAYWSVPLREQDQAKTSFTIRNRKYCWKVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWSKMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIECLGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLEYDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTIFSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSSCWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGREKAFEALLEGYWWPNMARDLGHFIRTCSTCQ 1140
            KI     FP P   RE+   +    +Y  M  +++  ++PL       TS T +N K+       +WT +CE +F+TLK+ L + P LA+PD+SK  ++ TDASS  + A+L Q  D   +PIAY SR C+P E  YSATE+E L +I A+K +RCY+ G  F ++TDH ALK L  +K PS R+ARW + L EY F + ++ GK     D LSR                        ++G I S P      +   Q+ D  C  ++K + K         + V+   Y+    G+L+         ++ G   ++VVP+ M  ++++  H   +  H G ++    + + Y+W  M +D+  +I  C +CQ
Sbjct:  299 KIISVKNFPRPKNVREVRSFIGLCSYYRRMVDKFSEIAIPL-------TSLTRKNVKF-------EWTAECEQAFETLKEKLVTYPVLAYPDFSKEFIVATDASSKSIAAILSQVQDGVERPIAYWSRVCNPAESRYSATELEMLALISAIKHWRCYLYGRHFHVITDHAALKYLLSLKDPSSRLARWGLKLSEYQFSVTHKPGKAHINVDALSR-----------------------AVAG-IKSIPFFSRNMLLNEQKTDSFCNGLLKQVEKG--------DVVS---YVKDLDGLLY---------KKDGNTHKLVVPQSMIVKVIETHHTAPYACHQGVKRTLSYISDHYFWVGMQKDIEEYISRCESCQ 614          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1091.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XV63_HETAK2.480e-12139.26Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A7S3XVA0_HETAK8.940e-6937.43Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A4Y2JYH6_ARAVE2.000e-5731.08RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A1X7UNW9_AMPQE3.110e-5436.48Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A0J7KTY6_LASNI3.980e-5432.36RNA-directed DNA polymerase n=1 Tax=Lasius niger T... [more]
A0A4Y2C826_ARAVE1.120e-5328.94RNA-directed DNA polymerase (Fragment) n=1 Tax=Ara... [more]
A0A6G5ABY0_RHIMP1.130e-5335.65RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhi... [more]
A0A023EXS9_TRIIF2.710e-5234.02RNA-directed DNA polymerase (Fragment) n=1 Tax=Tri... [more]
A0A5S6QHH5_TRIMR8.250e-5233.16Uncharacterized protein n=3 Tax=Trichuris muris Ta... [more]
A0A1B6K8D1_9HEMI7.090e-5131.55RNA-directed DNA polymerase (Fragment) n=1 Tax=Gra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1091contigH-akashiwo_Contig1091:57689..59337 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog161934.XP_010668395.1
PFAMsRVP_2,RVT_1,Retrotrans_gag,zf-CCHC
Model size1149
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.08e-53
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37UVQ@33090|Viridiplantae,3GJ7Q@35493|Streptophyta
DescriptionRetroviral aspartyl protease
Cds size1149
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387074.4775617-CDS-H-akashiwo_Contig1091:57688..578941681387074.4775617-CDS-H-akashiwo_Contig1091:57688..57894Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1091 57689..57894 +
1681387074.4888344-CDS-H-akashiwo_Contig1091:58322..587951681387074.4888344-CDS-H-akashiwo_Contig1091:58322..58795Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1091 58323..58795 +
1681387074.4990716-CDS-H-akashiwo_Contig1091:58867..593371681387074.4990716-CDS-H-akashiwo_Contig1091:58867..59337Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1091 58868..59337 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1091.2.1prot_H-akashiwo_Contig1091.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1091 57689..59337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1091.2.1

>prot_H-akashiwo_Contig1091.2.1 ID=prot_H-akashiwo_Contig1091.2.1|Name=mRNA_H-akashiwo_Contig1091.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=383bp
MDLRGLNKITETVRFPLPTPREMFDQLANSWWYSSMDCRWAYWSVPLREQ
DQAKTSFTIRNRKYCWKVITIQWTDDCEWSFQTLKDSLTSAPTLAFPDWS
KMLVIETDASSTGLGAVLLQETDLGRQPIAYASRSCSPQEKNYSATEIEC
LGVIFALKTFRCYVIGSRFRLVTDHQALKNLKLVKKPSGRVARWLMTLLE
YDFELVYRSGKLSTTADCLSRLPRADTALMKKENQYQRPRRKEEILSGTI
FSDPSVETEHIARAQREDPLCGPIIKYLNKEVSDGKTSQETVALSRYMSS
CWGILWHHHDYQGENRRTGTRLQMVVPEVMRTQILQWAHEGAFGTHVGRE
KAFEALLEGYWWPNMARDLGHFIRTCSTCQQFK
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mRNA from alignment at H-akashiwo_Contig1091:57689..59337+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1091.2.1 ID=mRNA_H-akashiwo_Contig1091.2.1|Name=mRNA_H-akashiwo_Contig1091.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1649bp|location=Sequence derived from alignment at H-akashiwo_Contig1091:57689..59337+ (Heterosigma akashiwo CCMP452)
ATGGACTTGCGaGGGCTGAACAAAATAACCGAAACAGTAAGGTTCCCACT TCCAACGCCTAGAGAAATGTTTGACCAGTTGGCAAACAGCTGGTGGTACA GTTCTATGGACTGTAGATGGGCTTACTGGAGCGTTCCTTTGAGAGAACAA GACCAAGCCAAAACAAGCTTCACTATAAGGAATCGGAAATATTGCTGGAA GGTGATGTGCTTTGGACTAAAAAATGCCCCAGCAACGTTCTCGCACCTGA TGAACAAAGTATTTCAAGGCTGTCAATATGACTTTGCTCTGTGCTTCTTA GATGATGTGCTCTGTTACAGTGGAAAAGACTTCAATCAACACTTAGAGCA TCTGGAAGAAATATTCCGCAGATTGAAGGTTGCTAACCTAAAATTGAAGC TTCCTAAATGTTGGTTTGGGGCAGATCAACTACCCTTTCTTGGGCATATT GTTTAGAGAGGGACTAAAAGCCTGACCCCAAAAAGATTGAAGCAGTAAGA AGACTGCGGCGACCTGGCTCAAAGAAGCAGGTGCGGTCTTTACTAGGCTT GGTTTCGTACTATAGACAGTTTGTGCCCGGATTTGCGTCTTTGGCAAGCC CATTGTATCAGCTTCTAAAAAAGGAGGCACCAAGAACTATTCAATGGACA GATGACTGTGAATGGTCATTCCAAACTTTGAAAGATAGTCTAACATCAGC TCCAACTTTGGCCTTTCCTGACTGGTCTAAAATGCTGGTGATCGAAACTG ATGCTAGCAGCACTGGTTTGGGGGCAGTACTCCTGCAAGAAACTGACTTG GGAAGACAACCTATTGCTTATGCAAGCAGATCTTGCTCCCCCCAAGAGAA AAATTACAGTGCAACAGAAATTGAGTGCCTAGGAGTAATTTTTGCTTTGA AGACATTCAGATGTTATGTCATTGGCTCGAGATTTCGCCTTGTAACAGAT CACCAGGCGTTGAAAAATCTGAAGTTGGTAAAGAAGCCCTCTGGAAGAGT GGCAAGATGGCTGATGACCTTATTAGAATACGACTTTGAGCTGGTCTACA GGAGCGGGAAACTCAGCACAACTGCTGATTGTCTTTCAAGACTTCCAAGA GCAGACAGTATTGATGATGATCAAATGGAAGAAGAAGATGATGTTGTTCC TATTGTGGCAGCTACAACTAGAGCACAAGCAGCACTCATGAAAAAGGAAA ATCAATACCAGCGACCAAGAAGAAAGGAAGAAATTTTGTCAGGCACTATA TTCAGCGATCCTTCTGTGGAGACTGAACATATTGCAAGAGCACAAAGGGA AGATCCTCTGTGTGGGCCAATAATTAAATATCTGAACAAGGAAGTTTCAG ATGGCAAAACAAGCCAGGAAACAGTGGCCCTTAGTAGATACATGTCTTCA TGCTGGGGAATACTTTGGCACCATCATGACTATCAAGGTGAAAATAGGCG CACGGGCACGAGATTACAAATGGTTGTGCCTGAAGTGATGCGCACTCAAA TTTTACAATGGGCACATGAAGGAGCTTTTGGGACTCACGTAGGAAGAGAA AAAGCCTTTGAAGCTCTACTTGAAGGATATTGGTGGCCTAATATGGCTCG AGACTTGGGCCATTTCATTAGAACTTGTTCTACATGCCAGCAATTCAAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1091:57689..59337+

>mRNA_H-akashiwo_Contig1091.2.1 ID=mRNA_H-akashiwo_Contig1091.2.1|Name=mRNA_H-akashiwo_Contig1091.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1149bp|location=Sequence derived from alignment at H-akashiwo_Contig1091:57689..59337+ (Heterosigma akashiwo CCMP452)
ATGGACTTGCGaGGGCTGAACAAAATAACCGAAACAGTAAGGTTCCCACT
TCCAACGCCTAGAGAAATGTTTGACCAGTTGGCAAACAGCTGGTGGTACA
GTTCTATGGACTGTAGATGGGCTTACTGGAGCGTTCCTTTGAGAGAACAA
GACCAAGCCAAAACAAGCTTCACTATAAGGAATCGGAAATATTGCTGGAA
GGTGATAACTATTCAATGGACAGATGACTGTGAATGGTCATTCCAAACTT
TGAAAGATAGTCTAACATCAGCTCCAACTTTGGCCTTTCCTGACTGGTCT
AAAATGCTGGTGATCGAAACTGATGCTAGCAGCACTGGTTTGGGGGCAGT
ACTCCTGCAAGAAACTGACTTGGGAAGACAACCTATTGCTTATGCAAGCA
GATCTTGCTCCCCCCAAGAGAAAAATTACAGTGCAACAGAAATTGAGTGC
CTAGGAGTAATTTTTGCTTTGAAGACATTCAGATGTTATGTCATTGGCTC
GAGATTTCGCCTTGTAACAGATCACCAGGCGTTGAAAAATCTGAAGTTGG
TAAAGAAGCCCTCTGGAAGAGTGGCAAGATGGCTGATGACCTTATTAGAA
TACGACTTTGAGCTGGTCTACAGGAGCGGGAAACTCAGCACAACTGCTGA
TTGTCTTTCAAGACTTCCAAGAGCAGACACAGCACTCATGAAAAAGGAAA
ATCAATACCAGCGACCAAGAAGAAAGGAAGAAATTTTGTCAGGCACTATA
TTCAGCGATCCTTCTGTGGAGACTGAACATATTGCAAGAGCACAAAGGGA
AGATCCTCTGTGTGGGCCAATAATTAAATATCTGAACAAGGAAGTTTCAG
ATGGCAAAACAAGCCAGGAAACAGTGGCCCTTAGTAGATACATGTCTTCA
TGCTGGGGAATACTTTGGCACCATCATGACTATCAAGGTGAAAATAGGCG
CACGGGCACGAGATTACAAATGGTTGTGCCTGAAGTGATGCGCACTCAAA
TTTTACAATGGGCACATGAAGGAGCTTTTGGGACTCACGTAGGAAGAGAA
AAAGCCTTTGAAGCTCTACTTGAAGGATATTGGTGGCCTAATATGGCTCG
AGACTTGGGCCATTTCATTAGAACTTGTTCTACATGCCAGCAATTCAAA
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