mRNA_H-akashiwo_Contig1039.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A7S4DBK9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBK9_HETAK) HSP 1 Score: 277 bits (708), Expect = 2.530e-92 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 Query: 4 CDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKMLNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALR 405 CDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKMLNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALR Sbjct: 1 CDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKMLNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALR 134
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A7S3Y3J4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3J4_HETAK) HSP 1 Score: 171 bits (434), Expect = 1.920e-50 Identity = 101/142 (71.13%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 385 AGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYARAARHPPGALRS----DGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 AGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRL ELYA PG LR+ DGLV HLKAEG EVGLVCQGWVMT P + R AWELFLR G KAVY Sbjct: 1 AGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRL-RELYAPGL---PGTLRALFVLDGLVARRLPRLHRHLKAEGVEVGLVCQGWVMTLFARDFPFDLVVR----AWELFLREGWKAVY 134
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A225W6Z9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6Z9_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.670e-40 Identity = 100/271 (36.90%), Postives = 133/271 (49.08%), Query Frame = 1 Query: 1 PCDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYA-RAARHPPGALRSDGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 P DRYGF AG A + + +E R KW+KM L W+ + R A LK+R RKG+P+ LRG VW+ L G + +PG Y L P + +TI DI RT+P+H F GQ AL +L AYS HDPEVGYCQG+GFL+ + L YMPE+ AFW L A + L A+LY R + P +GL + HL++EG + W +T P + R W+ FL G K +Y Sbjct: 51 PVDRYGFLVTDKRYNAGHAATNTYK-HAVWLENRRTQKWVKMIGKQLEDWEVCQLRHAATLKKRIRKGIPEALRGRVWSHLAGSSQMLLNNPGAYHQLLQTARVPCE---ETIARDIGRTFPRHSLFRDRSSLGQCALMNVLKAYSLHDPEVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGL-ADLYRPRMPKVPEVTFVFEGLFKQYMPQLSAHLESEGLHPTMYLTQWFLTLFTYNFPFEFVTR----VWDAFLHEGWKVIY 312
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: D0MU62_PHYIT (Rab-GAP TBC domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MU62_PHYIT) HSP 1 Score: 152 bits (384), Expect = 2.030e-40 Identity = 101/271 (37.27%), Postives = 130/271 (47.97%), Query Frame = 1 Query: 1 PCDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYA-RAARHPPGALRSDGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 P DRYGF KR A + +E R KW+KM L W+ + R A LK+R RKG+P+ LRG VW+ L G + +PG Y L P + +TI DI RT+PKH F GQ AL +L AYS HDPEVGYCQG+GFL + L YMPE+ AFW L A + L A+LY R + P +GL + HL+ EG + W +T P + R W+ FL G K +Y Sbjct: 56 PVDRYGFL--VTDKRYNGGHTAATHKHAVWLENRRTQKWVKMIGKQLEDWEVCQLRNAATLKKRIRKGIPEALRGRVWSHLAGSSQMLLNNPGAYHQLLQTTQVPCE---ETIARDIGRTFPKHSLFRDRSSLGQCALMNVLKAYSLHDPEVGYCQGMGFLTAMFLCYMPEQQAFWLLVACLNHKRYGL-ADLYRPRMPKVPEVTFIFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTR----VWDAFLHEGWKVIY 316
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A0W8DWN3_PHYNI (EVI5 protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DWN3_PHYNI) HSP 1 Score: 152 bits (384), Expect = 2.510e-40 Identity = 100/271 (36.90%), Postives = 132/271 (48.71%), Query Frame = 1 Query: 1 PCDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYA-RAARHPPGALRSDGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 P DRYGF +D + G + + +E R KW+KM L W+ + R A LK+R RKG+P+ LRG VW+ L G + +PG Y L P + +TI DI RT+PKH F GQ AL +L AYS HDPEVGYCQG+GFL + L YMPE+ AFW L A + L A+LY R + P +GL + HL+ EG + W +T P + R W+ FL G K +Y Sbjct: 56 PVDRYGFL-VTDKRYNGGHATSTTYKHAVWLENRRTQKWVKMIGKQLEDWEVCQLRNAATLKKRIRKGIPEALRGRVWSHLAGSSQMLLNNPGAYHQLLQTTQVPCE---ETIARDIGRTFPKHSLFRDRSSLGQCALMNVLKAYSLHDPEVGYCQGMGFLTAMFLCYMPEQQAFWLLVACLNHKRYGL-ADLYRPRMPKVPEVTFIFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTR----VWDAFLHEGWKVIY 317
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: H3GE06_PHYRM (Rab-GAP TBC domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GE06_PHYRM) HSP 1 Score: 147 bits (372), Expect = 8.940e-39 Identity = 98/271 (36.16%), Postives = 131/271 (48.34%), Query Frame = 1 Query: 1 PCDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYA-RAARHPPGALRSDGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 P DRYGF +D + G + +E R KW+KM L W+ + R A LK+R RKG+P+ LRG VW+ L G + +PG Y L P + +TI DI RT+P+H F GQ AL +L AYS HDPEVGYCQG+GFL+ + L YMPE+ AFW L A + L A+LY R + P L+ + HL+ EG + W +T P + R W+ FL G K +Y Sbjct: 51 PIDRYGFL-VTDKRYNGGHTATNTYKHAVWLENRRTQKWVKMIGKQLEDWEVCQLRHAATLKKRIRKGIPEALRGRVWSHLAGSTQMLLNNPGAYHQLLQTAQVPCE---ETIARDIGRTFPRHSLFRDRSSLGQCALMNVLKAYSLHDPEVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGL-ADLYRPRMPKVPEVTFVFQALLKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTR----VWDSFLHEGWKVIY 312
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A8K1C680_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C680_PYTOL) HSP 1 Score: 148 bits (374), Expect = 2.070e-38 Identity = 92/268 (34.33%), Postives = 131/268 (48.88%), Query Frame = 1 Query: 7 DRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYARAARHPPGALRSDGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 DRYGF KR +P + + + +E R KW+KM L WD + + + LK+R RKG+P+ LRG VW LL G + A +PG Y + P + +TI DI RT+PKH F GQ AL +L AYS HDP+VGYCQG+GFL+ + L Y+PEE +FW L A + + R + P + L+ + HL+ EG + W +T P + R W++FL G K ++ Sbjct: 112 DRYGFL--ITDKRYNKGIPDASQKQAVWLENRRTQKWVKMIGKQLEDWDVCQLKHASTLKKRIRKGIPEALRGRVWCLLAGSTQMLANNPGVYREFLQNKRVPCE---ETIARDIGRTFPKHYLFNDRSSMGQCALMNVLKAYSLHDPDVGYCQGMGFLSAMFLSYIPEEQSFWHLVACLNHKRYDMAGLYRPRMPKVPEVIFIFEHLMKELMPALSKHLENEGMHPTMYLTQWFITLFTYNFPFEFVTR----VWDVFLNEGWKVIF 370
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A6G0XPR2_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPR2_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.610e-38 Identity = 99/281 (35.23%), Postives = 134/281 (47.69%), Query Frame = 1 Query: 1 PCDRYGFF---RDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM-----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYARAARHPPGALRSDGL--VVGGCAGC-----TGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 P DRYGF + P+ + P+E + +E R KW+ M + W+R + ++PAKLK R RKG+PD +RG W L G + +PG Y L A P + DTI DI RT+PKH F GQ+AL +L AYS +DP VGYCQG+GF++ L L YMPEE FW L A + + Y A + PG R + + C HL AEG + W +T P + R W++FL G K V+ Sbjct: 45 PVDRYGFLVSDKRYSPQARQVKSPSETPKDSVWLENRRTQKWMSMTGGISIEDWERTKQKQPAKLKSRVRKGIPDAIRGIAWPHLAGSSLMMKNNPGMYRDLVATTQVPCE---DTILRDIGRTFPKHHLFKDSTSIGQSALLNVLKAYSVYDPNVGYCQGMGFISALFLSYMPEEQTFWHLVACLNH-------KKYGMADIYRPGMPRVVEIMAIFDQCLKIYVPKLAEHLDAEGLHPTMYATQWFVTIFAYSFPFDFVTR----VWDIFLHEGWKIVF 311
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: A0A067CMH2_SAPPC (Rab-GAP TBC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMH2_SAPPC) HSP 1 Score: 146 bits (368), Expect = 3.920e-38 Identity = 99/279 (35.48%), Postives = 129/279 (46.24%), Query Frame = 1 Query: 7 DRYGFFRDSDPKRAGLAVPAEVRARRLR---VEGYRAAKWIKML-----NAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYARAARHPPGALRSDGLVV--GGCAGCT-----GHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 DRYGF L +P + + L +E +R KWI M + W + R AKLK R RKG+P+ LRG W L G + HPG Y L A P + +TI DI RT+PKH F GQ AL +L AYS +DP+VGYCQG+GF++ L L YMPEE FWQL A + L A++Y PG R ++ C H+ EG + W +T P + R W++FL G K VY Sbjct: 35 DRYGFLVSDKHATCHLYIPTAAKRKNLDASWLENHRTQKWIAMTGKCTYDEWQSVKLRHSAKLKSRIRKGIPEALRGLAWPHLSGASMMMQNHPGMYRDLLATAHIPCE---ETISRDIGRTFPKHHLFKDAQSIGQGALMNILKAYSVYDPDVGYCQGMGFISALFLSYMPEEHTFWQLVAVLNQKKFGL-ADMYR------PGMPRVVEIIAIFDACIRLYLPKLGTHMDNEGLHPTMYATQWFVTIFAYSFPFEFVTR----VWDIFLHEGWKIVY 299
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Match: K3WL35_GLOUD (Rab-GAP TBC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL35_GLOUD) HSP 1 Score: 145 bits (366), Expect = 4.320e-38 Identity = 93/270 (34.44%), Postives = 127/270 (47.04%), Query Frame = 1 Query: 1 PCDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKM----LNAWDRYEARKPAKLKRRFRKGVPDCLRGAVWNLLGGVGALQAAHPGHYEALCARRDTPSQAIHDTIEVDIARTYPKHLFFARLDGAGQAALRRLLHAYSRHDPEVGYCQGVGFLAGLCLMYMPEEAAFWQLAAAMASPTLRLCAELYARAARHPPGALRSDGLVVGGCAGCTGHLKAEGCEVGLVCQGWVMT------PLPRLRRPGGAAWELFLRRGGKAVY 780 P DRYGF KR P + + +E R KW+KM L W+ + + A LK+R RKG+P+ LRG VW L G + +PG Y + P + +TI DI RT+PKH F GQ AL +L YS HDPEVGYCQG+GFL+ + L YMPEE +FW L A + L R + P + L+ HL++EG + W +T P + R W++FL G K ++ Sbjct: 59 PIDRYGFL--ISDKRYNRGTPENSQKTAVWLENRRTQKWVKMIGKQLEDWEICQLKNAAMLKKRIRKGIPEALRGRVWCHLAGSTQMVINNPGVYHEFLQSKHAPCE---ETIARDIGRTFPKHYLFNERTSLGQCALMNVLKVYSLHDPEVGYCQGMGFLSAMFLSYMPEEQSFWHLVACLNHKRYDLANLYRPRMPKVPELIFIFEKLMEQLMPQIAKHLESEGLHPTMYLTQWFITLFTYNFPFEFVTR----VWDMFLYEGWKIIF 319 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1039.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1039.3.1 >prot_H-akashiwo_Contig1039.3.1 ID=prot_H-akashiwo_Contig1039.3.1|Name=mRNA_H-akashiwo_Contig1039.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=260bp PCDRYGFFRDSDPKRAGLAVPAEVRARRLRVEGYRAAKWIKMLNAWDRYEback to top mRNA from alignment at H-akashiwo_Contig1039:104937..105716+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1039.3.1 ID=mRNA_H-akashiwo_Contig1039.3.1|Name=mRNA_H-akashiwo_Contig1039.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=780bp|location=Sequence derived from alignment at H-akashiwo_Contig1039:104937..105716+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1039:104937..105716+ >mRNA_H-akashiwo_Contig1039.3.1 ID=mRNA_H-akashiwo_Contig1039.3.1|Name=mRNA_H-akashiwo_Contig1039.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=780bp|location=Sequence derived from alignment at H-akashiwo_Contig1039:104937..105716+ (Heterosigma akashiwo CCMP452)back to top |