mRNA_H-akashiwo_Contig1038.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 419 bits (1076), Expect = 7.380e-146 Identity = 205/210 (97.62%), Postives = 206/210 (98.10%), Query Frame = 1 Query: 1 RAELSGANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGDLVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 +AELS ANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAF YLKGTQSESLRLGGDLVLRAFSDSDFCND VDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL EMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL Sbjct: 126 KAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 335
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 194 bits (494), Expect = 7.550e-54 Identity = 92/204 (45.10%), Postives = 132/204 (64.71%), Query Frame = 1 Query: 19 ANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGDLVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 A +RS+VGT+ W+A WT PE+A+++H L + +P A YL T+ + + LGG L L A++D+DFC++ G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++LR+AV D+MWL+ LL +G Q P+ EDN AC+ WAND V+K RH HVSYH KE V I + Y+ T Q+AD+ TK L Sbjct: 779 AKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPL 981
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A2M4CK71_ANODA (Putative pol polyprotein (Fragment) n=2 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK71_ANODA) HSP 1 Score: 169 bits (429), Expect = 3.300e-45 Identity = 91/210 (43.33%), Postives = 124/210 (59.05%), Query Frame = 1 Query: 7 ELSGANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGD--LVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 EL + YRS+VG+L +VA RP++A +V L R P K + A +R YL GT + SLRLGGD L AFSDSD+ DH KS TGYILF G I W+S+ Q VT S++EAEY+AL ++++W R LL +MG Q PT + EDN C+++ ++KR++H ++ V I++ Y T D ADILTKAL Sbjct: 594 ELEDISKYRSVVGSLMYVATTARPDIAASVSVLGRCFEKPTEKDWVAAKRVIRYLIGTVNWSLRLGGDRDYTLEAFSDSDWAGDHTTRKSTTGYILFYGGGAIAWTSRRQNCVTLSSMEAEYIALGETCQEVIWTRRLLEDMGEVQKSPTLIQEDNQGCLKFITSERISKRSKHIDTKACFVRDLVKKKIIKLNYCPTEDMRADILTKAL 803
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A6B9KLA8_9VIRU (Gag-Pol polyprotein n=2 Tax=Atrato Retro-like virus TaxID=2689360 RepID=A0A6B9KLA8_9VIRU) HSP 1 Score: 169 bits (428), Expect = 7.240e-45 Identity = 91/210 (43.33%), Postives = 124/210 (59.05%), Query Frame = 1 Query: 7 ELSGANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGD--LVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 EL + YRS+VG+L +VA RP++A +V L R P K + A +R YL GT + SLRLGGD L AFSDSD+ DH KS TGYILF G I W+S+ Q VT S++EAEY+AL ++++W R LL +MG Q PT + EDN C+++ ++KR++H ++ V I++ Y T D ADILTKAL Sbjct: 1148 ELEDISKYRSVVGSLMYVATTARPDIAASVSVLGRCFEKPTEKDWVAAKRVIRYLIGTVNWSLRLGGDRDYTLEAFSDSDWAGDHTTRKSTTGYILFYGGGAIAWTSRRQNCVTLSSMEAEYIALGETCQEVIWTRRLLEDMGEIQKSPTLIQEDNQGCLKFITSERISKRSKHIDTKACFVRDLVEKKIIKLNYCPTEDMRADILTKAL 1357
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.630e-43 Identity = 81/203 (39.90%), Postives = 121/203 (59.61%), Query Frame = 1 Query: 28 YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGDLV--LRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 +RS++G+L+++A TRP++A V +L R NP +H++A + YLKGT++ + GG + L A+SD+D+ +D D +SV+G +L L AP+VW + Q V ST EAEY+AL VK+ MW R LL +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 173 FRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A4Z0A525_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A525_9AGAM) HSP 1 Score: 156 bits (394), Expect = 2.770e-43 Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = 1 Query: 28 YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGD---LVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADI 615 Y S+VG L + A TRP+L++ V +L + NP H+ A +R Y+KGT +L GGD V ++D+D ND +S++GY FL PI WSSK Q V ST AEYLA+ A K+ +WLRSLL E+ PQ PT + DN A + + + + + R +H + YH +E V G IR+ YI T + ADI Sbjct: 100 YASIVGALMYAAMATRPDLSYAVQRLSQFMSNPGIAHYAAAKRVLRYVKGTLDLALVYGGDDGPWVPIGYADADHANDLDSRRSISGYAFFLSGTPISWSSKKQPTVADSTAVAEYLAIAHATKEALWLRSLLGELDFPQDSPTLIHCDNQASIAMSKEQVFHARTKHVDIKYHFIREHVDRGQIRLEYIPTAENTADI 298
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 155 bits (393), Expect = 5.390e-43 Identity = 79/203 (38.92%), Postives = 119/203 (58.62%), Query Frame = 1 Query: 28 YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGDLV--LRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 +RS++G+L+++A TRP++A V +L R NP +H++A + YLKGT++ + G + L A+SD+D+ +D D +SV+G +L L AP+VW + Q V ST E EY+AL VK+ MW R LL +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 93 FRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A2I0W4P1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W4P1_9ASPA) HSP 1 Score: 157 bits (397), Expect = 9.890e-43 Identity = 80/203 (39.41%), Postives = 122/203 (60.10%), Query Frame = 1 Query: 25 LYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGG-DLVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 LYR +VG+L ++ TRP++ + V+K + P +F+A++R Y+KGT + L L L +F DSD+ D D KS TGY FLG + + W K Q + S+ EAEY AL +A D++W+R LL E+GCPQ+ PT + DN++ + AN+ + + R +H V H +E + +I++ +I T DQ+ADI TKAL Sbjct: 164 LYRQLVGSLQYLT-LTRPDITYAVNKACQFMHQPTDANFDALKRILRYIKGTLNIGLPLSRHSFDLSSFVDSDWTGDQKDRKSTTGYCTFLGRSLVTWCVKKQSTIARSSTEAEYRALAAAAADLIWIRQLLHELGCPQNNPTKLFCDNTSAIALANNPVFHARTKHIEVDCHYIRECIKNNSIQVHHISTKDQIADIFTKAL 365
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A6A3GRJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GRJ1_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.660e-42 Identity = 75/204 (36.76%), Postives = 121/204 (59.31%), Query Frame = 1 Query: 28 YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGD---LVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 YRS++G L ++ TRP++AF V +L R NP +H+ A R YLK T+ + G + L+A+SD+D+ D +SV+G ++ G+AP+V+ SK Q S+ EAEY+AL V++++W R++L MG Q T + EDN + ++ + R +H + +H +E V GT+++ Y+ T +Q+ADILTKAL Sbjct: 6 YRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSTRQHGIIYHGGTHTVTLKAYSDADWGTSLDDRRSVSGVMVMTGNAPVVFKSKFQRTGALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADILTKAL 209
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Match: A0A2P4YS02_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YS02_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.890e-42 Identity = 76/204 (37.25%), Postives = 122/204 (59.80%), Query Frame = 1 Query: 28 YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFGYLKGTQSESLRLGGD---LVLRAFSDSDFCNDHVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 630 Y S++G L ++ TRP++A+ V +L R NP +H++A R YLK T+ + G + + AFSD+D+ + D +SV+G ++ +G+AP+V+ SK Q V S+ EAEY AL V++++W+R++L +MG Q T + EDN + A + N R +H + +H +E V GT+ + YI T Q+AD+LTKAL Sbjct: 65 YHSLIGCLLYITTCTRPDVAYVVTQLSRFLENPGQQHWKAAIRVLRYLKTTREHGIVYQGGPGGVTVEAFSDADWGTNIDDRRSVSGVMVLMGNAPVVFKSKFQRTVALSSAEAEYTALSLCVQEVLWMRAMLKDMGHEQGNATQIWEDNQGAIALAKNAGYNSRTKHVDIKHHFTRENVENGTVLVDYIDTKQQLADLLTKAL 268 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1038.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1038.3.1 >prot_H-akashiwo_Contig1038.3.1 ID=prot_H-akashiwo_Contig1038.3.1|Name=mRNA_H-akashiwo_Contig1038.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=210bp RAELSGANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVback to top mRNA from alignment at H-akashiwo_Contig1038:173041..173670- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1038.3.1 ID=mRNA_H-akashiwo_Contig1038.3.1|Name=mRNA_H-akashiwo_Contig1038.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=630bp|location=Sequence derived from alignment at H-akashiwo_Contig1038:173041..173670- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1038:173041..173670- >mRNA_H-akashiwo_Contig1038.3.1 ID=mRNA_H-akashiwo_Contig1038.3.1|Name=mRNA_H-akashiwo_Contig1038.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=630bp|location=Sequence derived from alignment at H-akashiwo_Contig1038:173041..173670- (Heterosigma akashiwo CCMP452)back to top |