mRNA_H-akashiwo_Contig1037.4.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 346 bits (888), Expect = 6.620e-116 Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIY 510 LLKQGVISESSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTAR MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCI+ Sbjct: 120 LLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIF 289
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 346 bits (888), Expect = 1.340e-113 Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIY 510 LLKQGVISESSSNFNAPIVMVAKK+GETRMCLDLRALNAITTPSKFPLPTAR MFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCI+ Sbjct: 120 LLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIF 289
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 259 bits (662), Expect = 4.550e-84 Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 1 Query: 58 MVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIY 510 MV KKTGETRMCLDLR+LNAITTP+KFPLPT R MFD L AYYF+SLDMLWAYWSVPLR+ DK KTAFTVRN+KYAFNVMCFGLTNAPATFSHLVNKVFQGCQ++FALCFLDDVLCY+ +F+LHL L +IF RM ANLKFKLPKC++ Sbjct: 1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMIKANLKFKLPKCLF 151
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A0P5XPI7_9CRUS (Polyprotein of retroviral origin (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5XPI7_9CRUS) HSP 1 Score: 155 bits (393), Expect = 8.700e-43 Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIYLEQ 519 +L ++ ES S F A IVMV KK GE RMC+D RALN IT K+PLP D L ++YF+ LD+L YW + + E DK KTAF +Y FN M FGLTNAP+TF +N + + Y+FAL +LDD++ +S + T H+ HL +F+ ++ A LK K KC + ++ Sbjct: 123 MLSNKILRESHSPFAAAIVMVPKKDGEMRMCIDYRALNKITVKDKYPLPRIDDTIDALCGSFYFSILDLLSGYWQIEIEESDKHKTAFICEFGQYEFNRMPFGLTNAPSTFQRAMNNILKTVLYKFALVYLDDIIVFS-NSITDHVTHLEAVFRLLKQAGLKLKRKKCEFFKE 294
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A6B0VG58_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VG58_IXORI) HSP 1 Score: 158 bits (399), Expect = 1.360e-41 Identity = 76/170 (44.71%), Postives = 108/170 (63.53%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIY 510 +LK+GVI S S+F++P+V+V KK G R C+D R LN IT +P+P D+L A YF+SLD+ YW +P+ E DK KTAF + Y FNVM FGL NAPATF +++ + +G +++ LC+LDD++ +S NF HL LSQ+ + AANL+ KC + Sbjct: 59 MLKKGVIRPSCSSFSSPVVLVKKKDGGIRFCIDYRELNEITRKDLYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPVNEEDKEKTAFVTPDGLYEFNVMPFGLCNAPATFERMIDNILRGLKWKTCLCYLDDIVIFSS-NFEEHLERLSQVLSCLSAANLQLNTKKCTF 227
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A0P5U4C5_9CRUS (Polyprotein of retroviral origin (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5U4C5_9CRUS) HSP 1 Score: 147 bits (372), Expect = 1.810e-41 Identity = 75/164 (45.73%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFK 492 +L ++ ES S F A IVMV KK GE RMC+D RALN IT K+PLP D L + YF+ LD+L YW + + E DK KTAF +Y FN M FGLTNAP+TF +N + + Y+FAL +LDD++ +S + T H+ HL +F+ ++ A LK K Sbjct: 62 MLSNKILRESHSPFAAAIVMVPKKDGEMRMCIDYRALNKITVKDKYPLPRIDDTIDALCGSVYFSILDLLSDYWQIEIEESDKHKTAFICEFGQYEFNRMPFGLTNAPSTFQRAMNNILKTVLYKFALVYLDDIIVFS-NSITDHVTHLEAVFRLLKQAGLKLK 224
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A015L6B7_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015L6B7_RHIIW) HSP 1 Score: 145 bits (367), Expect = 3.440e-41 Identity = 73/167 (43.71%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 10 QGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIY 510 QG+I +S+S + +P+V+V KK GE R+C+D R LNA+T +PLP M ++ + A +FT+LD+ YW V + D KTAF Y F VM FGL AP TF L+N++ Q +F +LDDV+ YS HL HL Q+F+ +R ANLK KL KC + Sbjct: 4 QGLIRKSASPWASPVVIVDKKGGEKRLCIDYRKLNAVTKADAYPLPRIDDMLESFSNATWFTTLDLASGYWQVAMDPADIEKTAFITPFGLYKFLVMPFGLAYAPGTFQRLMNRILQEYLGKFVAVYLDDVIIYSKGTLEQHLDHLRQVFETLRRANLKIKLKKCYF 170
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A2G8JPY9_STIJA (Retrovirus-related Pol polyprotein from transposon n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JPY9_STIJA) HSP 1 Score: 149 bits (375), Expect = 4.400e-41 Identity = 74/173 (42.77%), Postives = 104/173 (60.12%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIYLEQ 519 +LK+GVI SSS + +P+V+V KK G TR C+D R LN ITT +P+P D+L + +FT+LD+ YW V + E D+ KTAF + Y F VM FGL NAPATF L+ K+ G Q++ L +LDDV+ + +NF H+ + +F R + A LK KC +Q Sbjct: 1 MLKRGVIEPSSSPWASPVVLVKKKDGSTRFCVDYRRLNDITTKDSYPIPRIDDSLDSLNGSTWFTTLDLASGYWQVEMDESDREKTAFITHSGLYQFCVMPFGLCNAPATFERLMEKILSGLQWQTCLVYLDDVIIFG-KNFEEHIAAIDDVFTRFKLAGLKLSPKKCFLFKQ 172
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A815BYL6_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815BYL6_9BILA) HSP 1 Score: 150 bits (378), Expect = 1.240e-40 Identity = 72/168 (42.86%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKC 504 LLKQG+I ES+S +++PIV+V KK G R C+D R LN ITT FP+P +FD+L++A Y+T++D Y+ V L D+ KTAF+ R+R Y F V+ G+TN P F +V+++ +++++L +LDD + YSP F HL HL I R+ AN + + KC Sbjct: 85 LLKQGIIEESTSPWSSPIVLVRKKDGSVRFCIDFRKLNNITTKDAFPIPQIDDIFDHLSQAEYYTTIDFKSGYFQVGLDPKDRPKTAFSTRDRHYQFTVLPQGVTNDPPAFQRIVSQILGPTRWQYSLAYLDDAIIYSP-TFDQHLTHLDDILNRLNDANFRLNVNKC 251
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Match: A0A015J1N0_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J1N0_RHIIW) HSP 1 Score: 150 bits (379), Expect = 1.410e-40 Identity = 72/170 (42.35%), Postives = 108/170 (63.53%), Query Frame = 1 Query: 1 LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTARGMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRMRAANLKFKLPKCIY 510 +L+QG+I S+S ++ P+V+V KK G+ R C++ + LN IT +PLP + D+L +A +FT+LD+ YW + +R D+ KTAF + Y F VM FGL NAPATF ++KV G + +F L +LDDV+ YS + F H+ HL ++ R+R ANL+ K KC + Sbjct: 1 MLEQGLIKPSTSPWSFPVVVVKKKNGKLRFCVNYKPLNDITKKDNYPLPRIDELLDSLQDAQWFTTLDLASGYWQIKVRAEDQEKTAFITKFGTYEFKVMPFGLCNAPATFQRTMDKVLHGIKEKFVLVYLDDVIIYS-KTFKDHIQHLEEVLNRIRKANLRLKAEKCYF 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1037.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1037.4.1 >prot_H-akashiwo_Contig1037.4.1 ID=prot_H-akashiwo_Contig1037.4.1|Name=mRNA_H-akashiwo_Contig1037.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=173bp LLKQGVISESSSNFNAPIVMVAKKTGETRMCLDLRALNAITTPSKFPLPTback to top mRNA from alignment at H-akashiwo_Contig1037:119912..120430- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1037.4.1 ID=mRNA_H-akashiwo_Contig1037.4.1|Name=mRNA_H-akashiwo_Contig1037.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig1037:119912..120430- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1037:119912..120430- >mRNA_H-akashiwo_Contig1037.4.1 ID=mRNA_H-akashiwo_Contig1037.4.1|Name=mRNA_H-akashiwo_Contig1037.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig1037:119912..120430- (Heterosigma akashiwo CCMP452)back to top |