mRNA_H-akashiwo_Contig1037.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A7S3XSK1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSK1_HETAK) HSP 1 Score: 439 bits (1129), Expect = 1.530e-153 Identity = 213/229 (93.01%), Postives = 220/229 (96.07%), Query Frame = 1 Query: 1 IHEIMLQWAHQGAFGAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCDACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 + EIMLQWAHQG FGAHIGRDKALEILRQGYFWV MARDMT FV SCQTCQ+CKNPAPQLRAR TT+QRPMASQPFQVIH DACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFL CIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLT VS+YHPQANGRAERM+S+IKKTLKTMVLENT+AWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP Sbjct: 10 LQEIMLQWAHQGTFGAHIGRDKALEILRQGYFWVNMARDMTTFVNSCQTCQRCKNPAPQLRARVTTMQRPMASQPFQVIHGDACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLKCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTPVSVYHPQANGRAERMVSIIKKTLKTMVLENTSAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 238
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A443S0E0_9ACAR (RNA-directed DNA polymerase (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S0E0_9ACAR) HSP 1 Score: 122 bits (306), Expect = 2.040e-29 Identity = 78/231 (33.77%), Postives = 118/231 (51.08%), Query Frame = 1 Query: 13 MLQWAHQGAFGAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCDAC------TIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 +LQ +H+ A H G L+ Y+W KM +D+ FVGSC+TC K A + T + P + F+ IH D R +I VD+ + YVE+ + T +++ + F+ I RH TP I DN + F ++L V+ + + YHP+ANG AER + IK+TL + + WE+ +P AAFA NTA H T ++PF V+ R A++P Sbjct: 48 VLQESHESAESGHRGMKATFRRLQGKYWWPKMFKDIVSFVGSCKTCALTK--ARNHKQFGTPMLIPTYGK-FETIHMDIAGPLTPGPSGKRFFIIAVDRKTKYVEVSAIHEQ-TSKNVIKFFMKYICLRHGTPRAVITDNGKQFLAADFEKLLAERNVQHYTTTPYHPEANGAAERTIRTIKETLTAICGSKKSHWERSLPFAAFAINTAVHESTGKSPFETVYDRRALIP 274
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A1I7YFB0_9BILA (Uncharacterized protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7YFB0_9BILA) HSP 1 Score: 122 bits (307), Expect = 1.940e-28 Identity = 71/222 (31.98%), Postives = 112/222 (50.45%), Query Frame = 1 Query: 40 FGAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCD------ACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 FGAH+G +K E + + +W M D+ V +C TCQ+ K A Q+R + + +P + +H D +R ++I +D FS ++ + + R++AEA + + HS P DN + F ++ + LG + + YH Q+NG+AER + +K L TMV E W+ + A FA NT+ H TK+ PF+L GRDA LP Sbjct: 375 FGAHLGIEKTAEKMIKRVYWPAMKEDIKKVVTACDTCQRRKGSATQIRREPMQVSWKV-DRPNEHLHTDLMGPLPTTEAGNRYVLITIDAFSKFLTATALPDQLA-RTVAEALVNEVFLIHSIPKTISTDNGSNFCSELFEELCQLLGTRHVRTTPYHAQSNGQAERSVQSVKNMLSTMVTEGKKEWDSYVKTACFAYNTSIHATTKQIPFYLTFGRDARLP 594
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A443SAU2_9ACAR (RNA-directed DNA polymerase n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SAU2_9ACAR) HSP 1 Score: 120 bits (301), Expect = 1.370e-27 Identity = 71/231 (30.74%), Postives = 112/231 (48.48%), Query Frame = 1 Query: 13 MLQWAHQGAFGAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCDAC-----TIRSRN-IMIFVDQFSGYVELELMRGPITGRSLAEAFLT-CIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVL 684 +L H H+G DK + +RQ + W M+RD+ ++ SC CQK + + + +Q+ + PFQ++ D T R I++ +D + ++E + +R + FL + RHS P I D F L GVK T + YHPQ+NG ER +K + V + W+ ++P A FACNT++ + TK+TPF L++GRDAV Sbjct: 468 VLSELHDSKESGHLGFDKTINKVRQRFQWKGMSRDVKAYIDSCVQCQKANQKS---KMKHGLMQQMPTADPFQIVAIDFAGPLPKTARQNEYIVVLIDFGTRWIEAKALRA--ANADIVIKFLQESVFLRHSVPKQLISDRGVQFTSSKFQDFLDQHGVKHTQTTAYHPQSNGCVERQNRTLKNIMSKYVASHQKDWDLILPYAVFACNTSEQKSTKQTPFRLLYGRDAVF 693
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: UPI000C6D8B19 (uncharacterized protein LOC111620395 n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D8B19) HSP 1 Score: 117 bits (292), Expect = 2.280e-26 Identity = 75/233 (32.19%), Postives = 115/233 (49.36%), Query Frame = 1 Query: 7 EIMLQWAHQGAFGAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCDAC----TIRSRN--IMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 E +L+ H H+G K + L+ ++W +M + +T + SCQ C + P +A T P S+ F+ D T + N +++FVD FS + E + IT +++A+AF+T I+ RHS P + D + V +V L V+ + YHPQ NG ER+ + L V + W+++IP A FA NT H T ETPFFL++GRD P Sbjct: 1381 EYILKLFHDIPSSGHLGAKKMRKKLQNQFYWPEMNKHITHYCDSCQECAIRRRPLHGHQAPLQTF--PKISRLFERTALDIQGPLPTTHNGNKYLLVFVDHFSRWAEA-IPLPDITAKTVAKAFVTQIILRHSVPRQLLTDRGSNFVSKVMKEVCELLHVERLLTTAYHPQCNGMVERLNKTLIDILTHYVDADQRNWDEMIPYALFAYNTTVHSSTNETPFFLLYGRDPTYP 1610
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: UPI0007AF50B9 (uncharacterized protein LOC107615911 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AF50B9) HSP 1 Score: 111 bits (278), Expect = 1.600e-24 Identity = 73/234 (31.20%), Postives = 111/234 (47.44%), Query Frame = 1 Query: 7 EIMLQWAHQGAFGAHIG-RDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCD------ACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 E++L AH+G G H G R A + LR G++W + D V +C CQK +P + + S PF D + + +++ VD FS ++E + + IT + I+CR P + DN + TF + L+ L +K S+ HPQ+NG AE +I + LK + W +LIP +A NT H TKETPF LV+G +A++P Sbjct: 919 ELLLAEAHEGICGIHCGARSLAQKALRAGFYWPTIWEDSKHKVRTCDNCQKH---SPIINMHAEHLHHSTVSWPFNRWGIDILGPFPTAPRQVKFLVVAVDYFSKWIEAQPL-AKITSSQMISFVWKYIICRFGIPGHIVTDNGRQFIDSTFKEFLQNLKIKQHFSSVEHPQSNGLAEAANKIILQALKKKLDSAKGLWAELIPEVLWAYNTTIHSTTKETPFRLVYGSEAMIP 1148
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A6P4C1Z4_ARADU (uncharacterized protein LOC107461923 n=3 Tax=Arachis TaxID=3817 RepID=A0A6P4C1Z4_ARADU) HSP 1 Score: 111 bits (278), Expect = 1.660e-24 Identity = 70/234 (29.91%), Postives = 115/234 (49.15%), Query Frame = 1 Query: 7 EIMLQWAHQGAFGAHIG-RDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCD------ACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 +++L AH+G G H G R A +ILR G++W + D + V +TC+KC+ AP + + + S PF D + + + +++ +D FS ++E + + IT + I+CR P + DN F + L+ L ++ S+ HPQ+NG AE V+ + L+ + W +LIP +A NT H TKETPF LV+G +A++P Sbjct: 1367 DLILSEAHEGICGMHTGARSLAQKILRAGFYWPTLWEDSSKKV---KTCEKCQKHAPIINLPAEELHHSVVSWPFNRWGMDILGPFPTASGQVKYLVVAIDYFSKWIEAQPL-AKITSSQMVNFVWKHIICRFGIPQHIVTDNGRQFTDHNFKEFLQNLKIRQHFSSVEHPQSNGLAEAANKVLLQALRKKLDNAKGMWAELIPEVLWAYNTTTHSTTKETPFRLVYGSEAMIP 1596
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A4U8V1F6_STECR (Integrase catalytic domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8V1F6_STECR) HSP 1 Score: 106 bits (264), Expect = 2.280e-24 Identity = 68/211 (32.23%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 43 GAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQ----RPMASQPFQVIHCDACTIRS-RNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFL 660 GAH+G DK LE LR+ +WV MA D V C+ CQ+ K Q+ TI RP ++ T R R +++ VD F+ +V + ++ I R++AEA + + HS P DN F ++ + LG S YHPQANGR ER+ + + ++ + W+ + AAFA N + H T E+ FFL Sbjct: 10 GAHLGIDKTLERLRKRVYWVGMAADARQVVRECEVCQRRKENVQQVFHEPMTIPTELTRPNQQWFIDILGPLPVTSRGFRYVLVVVDGFTKFVTVSPLKD-IQARTVAEALVNDAIMTHSVPEAITSDNAAQFTSELFSELCKLLGTNHIRASPYHPQANGRVERVNKPLVDVICSVATDAEHDWDLFVKTAAFALNCSVHATTGESAFFL 219
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: A0A151S1L3_CAJCA (Pro-Pol polyprotein n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S1L3_CAJCA) HSP 1 Score: 104 bits (260), Expect = 7.720e-24 Identity = 62/219 (28.31%), Postives = 107/219 (48.86%), Query Frame = 1 Query: 43 GAHIG-RDKALEILRQGYFWVKMARDMTIFVGSCQTCQK--CKNPAPQLRARTTTIQRPMASQPFQVIHCDACTIRSRNIMIF-VDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 G+HIG R ++ R GYFW + D +V C CQ+ + +P R + P ++ + +R +I VD FS ++E E + I+ + +VCR+ P + + DN + R +G+++T S+ HPQ+NG+AE +I LK V ++ +W + +P ++ +T H T++TPF LV+G DA++P Sbjct: 3 GSHIGGRALVYKVARAGYFWPSLRNDCINWVQKCDGCQRHATLHHSPAERLHSILSLWPFNKWGIDILGPFSIAVRQLKFLIVAVDYFSKWIEAEPV-ATISAEKVKTFLWKNVVCRYGVPQVLVSDNGTQFASSKVRKFCRGIGIRMTFTSVEHPQSNGQAESANKIILAGLKKRVQDSGASWVEELPRVLWSYHTTVHSSTRDTPFNLVYGTDAMIP 220
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Match: UPI000DECB330 (uncharacterized protein LOC112727450 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DECB330) HSP 1 Score: 109 bits (272), Expect = 1.050e-23 Identity = 73/234 (31.20%), Postives = 109/234 (46.58%), Query Frame = 1 Query: 7 EIMLQWAHQGAFGAHIG-RDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKNPAPQLRARTTTIQRPMASQPFQVIHCD------ACTIRSRNIMIFVDQFSGYVELELMRGPITGRSLAEAFLTCIVCRHSTPSIAIMDNVNYQVKGTFPQVLRTLGVKLTSVSLYHPQANGRAERMMSVIKKTLKTMVLENTTAWEKLIPLAAFACNTAQHRETKETPFFLVHGRDAVLP 687 +++L AH+G G H G R A + LR G++W + D V SC CQK AP + + S PF D + + +++ +D FS ++E + + IT + I+CR P + DN TF + L+ L +K S+ HPQ NG AE +I + LK + W +LIP +A NT H TKETPF LV+G +A++P Sbjct: 1331 DLLLAEAHEGICGIHSGARSLAQKALRAGFYWPTIWEDSKNKVRSCDNCQKH---APIINMPAEHLHHSEVSWPFNRWGIDILGPFPTAPRQVKFLVVAIDYFSKWIEAQPL-AKITSSQMISFVWKYIICRFGIPGHIVTDNGRQFTDSTFKEFLQNLKIKHHFSSVEHPQTNGLAEAANKIILQALKKKLDNAKGLWAELIPEVLWAYNTTVHSTTKETPFRLVYGSEAMIP 1560 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1037.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1037.3.1 >prot_H-akashiwo_Contig1037.3.1 ID=prot_H-akashiwo_Contig1037.3.1|Name=mRNA_H-akashiwo_Contig1037.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=225bp MLQWAHQGAFGAHIGRDKALEILRQGYFWVKMARDMTIFVGSCQTCQKCKback to top mRNA from alignment at H-akashiwo_Contig1037:118148..118834- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1037.3.1 ID=mRNA_H-akashiwo_Contig1037.3.1|Name=mRNA_H-akashiwo_Contig1037.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=687bp|location=Sequence derived from alignment at H-akashiwo_Contig1037:118148..118834- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1037:118148..118834- >mRNA_H-akashiwo_Contig1037.3.1 ID=mRNA_H-akashiwo_Contig1037.3.1|Name=mRNA_H-akashiwo_Contig1037.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=675bp|location=Sequence derived from alignment at H-akashiwo_Contig1037:118148..118834- (Heterosigma akashiwo CCMP452)back to top |