mRNA_H-akashiwo_Contig1034.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A6V1N9P3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N9P3_HETAK) HSP 1 Score: 625 bits (1613), Expect = 5.700e-226 Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 1 Query: 1 MQAGRGSAKKGTAQKKHGGGLVPAVVDADINKLLNSQLLDDGVGPRPRPCCCGNIFPWCDCNMNPFQILFLVFLTLLFSATCIDFVTTQYILTGTEDLTGWLEDQPLAVALLVFAGACAAFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTGEIVVYALGTVVLVATVVLMVRWTKRVIEEEVERAXXXXXXXAAGSVADLESLAGGGRR 984 MQAGRGSAKKGTAQKKHGGGLVPAVVDADINKLLNSQLLDDGVGPRPRPCCCGNIFPWCDCNMNPFQILFLVFLTLLFSATCIDFVTTQYILTGTEDLTGWLEDQPLAVALLVFAGACAAFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTGEIVVYALGTVVLVATVVLMVRWTKRVIEEEVERAXXXXXXXAAGSVADLESLAGGGRR Sbjct: 1 MQAGRGSAKKGTAQKKHGGGLVPAVVDADINKLLNSQLLDDGVGPRPRPCCCGNIFPWCDCNMNPFQILFLVFLTLLFSATCIDFVTTQYILTGTEDLTGWLEDQPLAVALLVFAGACAAFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTGEIVVYALGTVVLVATVVLMVRWTKRVIEEEVERAXXXXXXXAAGSVADLESLAGGGRR 328
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A5A8DZC1_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZC1_CAFRO) HSP 1 Score: 97.4 bits (241), Expect = 3.430e-19 Identity = 73/235 (31.06%), Postives = 112/235 (47.66%), Query Frame = 1 Query: 196 FQILFLVFLTLLFSATCIDFVTTQYILTGTEDLTGWLEDQPLAVALLVFAGACAAFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGV-----AELATQYSTWSTGEIVVYALGTVVLVATVVLMVRWTKR 885 F++L L+ + +D +TT + ED WL L + FAG + + + L G+ F+ G A G+ T LG +LGA + F I RY+L D Q W +R L +D +A +GLR+ LLRL+P++PF+A NY+ AT S D++ V + P A YFGS++ V E+ W + A+GTV VA +V + + +R Sbjct: 66 FRVLLLLXXXXXAAYIVVDSLTTMQLTKWFEDFLRWLRAN-LVLGSAAFAGVYVVATTCFFPGSILTLGAGFTFSAALGQGA-GIAVATAVVFLGASLGATLAFFIGRYVLRDVAQSWSKKYRILGAIDRAIAKSGLRLMLLLRLSPVIPFSAFNYVAAATGVSIRDFVIANVAIIPGTVAYCYFGSLLSNVKATADGEVGDPALQWG-----LIAVGTVATVAALVTVTCFARR 293
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: W7TSR1_9STRA (SNARE associated Golgi protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSR1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.500e-18 Identity = 75/230 (32.61%), Postives = 117/230 (50.87%), Query Frame = 1 Query: 301 WLEDQPLAVALLVFAGACAAFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASN-GLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTG-EIVVYALGTVVLVATVVLMVRWTK---RVIEEEVERAXXXXXXXAAGSVADLESLAGG 975 W+ PL A + FA A V V A+ L GG+LF G G ++ ++A +G + GA F + R++L++ Q L + L+ +DA L + GL++ LLRL+PLVPF A NY++ TS S Y G VGM P A ++ G+ G+ A S+ G +I +Y +G V LVA V ++ R+ + R I++E E A G +++ + G Sbjct: 87 WVGRHPLRGA-MAFAAVYALSVVFFVPGAALTLGGGFLFGQALG-VGPGTVFASLAVFVGASAGAVAAFSLGRWLLHETAQSTLNRYTILRALDASLHGHRGLKIVLLLRLSPLVPFTALNYMMSVTSVSLKTYTLGLVGMVPAVVAYSFLGTTAGGLTREAGGESSVERGVKIAMYVVGAVALVAAVGVLSRFAREELRKIQDEGEGARGEGRDVEGGGEGEVKEVGRG 314
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A7S2F3C7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3C7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 7.540e-18 Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 385 TAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTGEIVVYALGTVVLVATVVLMVRWTKRVIEEEVERAXXXXXXXAAGSVADLESL 966 T A+ GY+F+ G+T G+I G+ ++ +G G + +I R+ML + L +D L+ G ++NFLLRL P++P N++L T+T++ +Y G G+ PW CAY GS V+ + +++ + I +A V+L+A ++L+ R + VIE+ + +A GS ++ L Sbjct: 29 TLPAIGAGYMFSHKYGTTG-GIILGSFSSYVGSVCGGLIVMMITRHMLRSWAIKLFQKQGRLSTLDRALSQAGYKLNFLLRLQPVIPTNVLNFMLGVTNTTYIEYSFGYFGLLPWIAFCAYVGSGVNNMTDVSKHEAMNRKMYIFAFAGSAVLLLAAIILISRHAQAVIEQALSQARKCGDLEKRGSKGEMAPL 221
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A7S2PYG7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PYG7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.550e-17 Identity = 57/178 (32.02%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 247 IDFVTTQYILTGTEDLTGWLEDQPLAVALLVFAGACAAFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAG-HRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAE 777 ID +TT+YI TG ++ W+E L + F G +V V + + L G++F G GV+ ++A +G +LG+ F++ RY++ DC + L + ++ +D L +NGL++ LLRL+P+VPF A NY+ T S DY+ +G+ P + G+ G+AE Sbjct: 61 IDSLTTKYISTGFQEFLTWIESN-LVAGVFAFMGVYFIATVCFVPGSLLTLGSGFVFGSAVG-VGYGVVLASIAVFVGASLGSIAAFLLGRYLMRDCVRRRLVKKYPVIEAIDEALQNNGLKIFLLLRLSPIVPFNAINYIAGVTGISLKDYVIALIGILPGTILYCFIGASAGGLAE 236
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.730e-17 Identity = 57/167 (34.13%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 286 EDLTGWLEDQPLAVALLVFAGACAAF--SVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAEL 780 D W+ED P+ VFA AC +VA + + + L G +F G GV G+ A LG ++GA + F++ RY+L D Q + ++ +D + S GL++ LLRL+P+VPF A NY++ T+ S DY GC+G+ P A + GS G+ ++ Sbjct: 57 SDFLAWVEDNPIEG---VFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGI-GRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDM 219
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A4D9CYU5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYU5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.730e-17 Identity = 66/201 (32.84%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 388 AMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASN-GLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTG-EIVVYALGTVVLVATVVLMVRWTK---RVIEEEVERAXXXXXXXAAGSVADLESLAGG 975 A+ L GG+LF G G ++ ++A +G + GA F + R++LY+ Q L + + +DA L + GL++ LLRL+PLVPF A NY++ TS S Y G VGM P A ++ G+ G+ A S+ G +I +Y +G V LVA V ++ R+ + R I++E E A G +++ + G Sbjct: 19 ALTLGGGFLFGQALG-VGPGTVFASLAVFVGASAGAVAAFSLGRWLLYETAQSTLNRYTISRALDASLHGHRGLKIMLLLRLSPLVPFTALNYMMSVTSVSLKTYTLGLVGMVPAIVAYSFLGTTAGGLTREAGGESSVERGVKIAMYVVGAVALVAAVGVLSRFAREELRKIQDEGEGARGEGRDVEGGGEGEVKEMGRG 218
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A2D7PKW6_9DELT (TVP38/TMEM64 family membrane protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2D7PKW6_9DELT) HSP 1 Score: 88.2 bits (217), Expect = 9.020e-17 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 406 GYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYST-WSTGEIVVYALGTVVLVATVVLMVRWTKRVIEE 897 G L T+ G+ GV+ GT+ + LG++ F+IARY+ + L + +D +A +GL++ FLLRL+P PF+ NY L T SF DY GM P Y+GS++ VA++ATQ T +G +V ALG V L+ R +R + E Sbjct: 62 GSLLTLAAGAL-FGVVQGTLIVWISAMLGSSGAFLIARYIARGWVENKLVQNERFDAVDRAVAESGLKITFLLRLSPAFPFSFLNYALGLTRVSFRDYALAGFGMLPGTLLYVYYGSVIGAVAKIATQTETPKDSGYYIVMALGLAATVLVTTLVTRIARRALAE 225
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A2D7I0V8_9DELT (TVP38/TMEM64 family membrane protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I0V8_9DELT) HSP 1 Score: 86.3 bits (212), Expect = 2.650e-16 Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 424 LTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYDCGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELA---TQYSTWSTGEIVVYALGTVVLVATVVLMVRWTKRVIEEEVE 906 L G GV +GT+ LG++++F+IARY+ + L + + + NGL++ FLLRL+P PF+ NY L T SF DYL VGM P Y G ++ VA LA T W GE V +G + +A L+ R KR + E VE Sbjct: 48 LAGGAIFGVTFGTLYVITAAVLGSSISFLIARYLARGWVETKLQQNARFDAVARAVGENGLKITFLLRLSPAFPFSFMNYALGLTRVSFRDYLFASVGMLPGTLLFVYSGRIIGDVAALAGGVTSERGW--GEYAVLGIGLLATLAVATLVARIAKRALNEIVE 209
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Match: A0A1C0V416_9CYAN (TVP38/TMEM64 family membrane protein n=8 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V416_9CYAN) HSP 1 Score: 85.1 bits (209), Expect = 7.750e-16 Identity = 64/172 (37.21%), Postives = 92/172 (53.49%), Query Frame = 1 Query: 358 AFSVACVTLTAMALAGGYLFTVLTGSTAMGVIYGTVATTLGGTLGAAVTFVIARYMLYD-CGQEWLAGHRWLQGMDAVLASNGLRMNFLLRLTPLVPFAACNYLLPATSTSFADYLAGCVGMAPWFFACAYFGSMVDGVAELATQYSTWSTGEI--VVYALGTVVLVATVVL 864 AF V V T +AL G L T+ G GV +G+V TLG+ F++ RY + D Q W+AG+R Q +D +A +GL++ L+RL+PL PF A NY+L T S DYL +GM P A Y G+ +A L Y + I +++ LG L+AT+V+ Sbjct: 25 AFMVVYVVAT-VALVPGSLLTLGAG-VLFGVGWGSVIVFWAATLGSLAAFLVGRYGIRDWVEQRWIAGNRQFQAIDRAIAEDGLKIVLLMRLSPLFPFNALNYMLGLTQVSIRDYLLASIGMLPGTVAYVYIGASFRDLASLFAGYGERAKSPIEWLLFILG---LIATLVV 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1034.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1034.10.1 >prot_H-akashiwo_Contig1034.10.1 ID=prot_H-akashiwo_Contig1034.10.1|Name=mRNA_H-akashiwo_Contig1034.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=329bp MQAGRGSAKKGTAQKKHGGGLVPAVVDADINKLLNSQLLDDGVGPRPRPCback to top mRNA from alignment at H-akashiwo_Contig1034:196783..200599- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1034.10.1 ID=mRNA_H-akashiwo_Contig1034.10.1|Name=mRNA_H-akashiwo_Contig1034.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3817bp|location=Sequence derived from alignment at H-akashiwo_Contig1034:196783..200599- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1034:196783..200599- >mRNA_H-akashiwo_Contig1034.10.1 ID=mRNA_H-akashiwo_Contig1034.10.1|Name=mRNA_H-akashiwo_Contig1034.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=987bp|location=Sequence derived from alignment at H-akashiwo_Contig1034:196783..200599- (Heterosigma akashiwo CCMP452)back to top |