mRNA_H-akashiwo_Contig1032.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1032.6.1
Unique NamemRNA_H-akashiwo_Contig1032.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A6V1V4J2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V4J2_HETAK)

HSP 1 Score: 612 bits (1578), Expect = 4.760e-220
Identity = 297/303 (98.02%), Postives = 300/303 (99.01%), Query Frame = 1
Query:    1 LTMTAPEMAKLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGYP 909
            LTMTAPEMAKLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELK MLKGVRL+R+SRLV FDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRK+THTFRYLHWRSNHPKKTKLGVMKC IHRAHRLCDREEDLRWELGFLKDQFISNGYP
Sbjct:   60 LTMTAPEMAKLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKKMLKGVRLSRNSRLVSFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKETHTFRYLHWRSNHPKKTKLGVMKCLIHRAHRLCDREEDLRWELGFLKDQFISNGYP 362          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A7S4DDA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA1_HETAK)

HSP 1 Score: 264 bits (675), Expect = 3.460e-80
Identity = 143/306 (46.73%), Postives = 197/306 (64.38%), Query Frame = 1
Query:    7 MTAPEMAKLYLLIKVHKDGY--PGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRC---KHKPTLWVRMRDDVFIIWDHGEEKLQELLS-HVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGY 906
            +TA E+A  YL IKVHK G   PGR VVS I+DP  N+   +T IL P++   RSF+K+S+ LK ML  V L     L  FD+  +YPSIP + ALEV+ +KL++D TL +RT   P QI+ LL +C+ETHFK IDG I+TQ+DG PIGKSISG IAGIY+  +EE+ + +++    K +P  W R +DDV ++W  G E+       ++N +E+RIQ++ E E +G L  LD+   RVG  + T +YRK THT ++   R+N P+K  LG +K  ++RA RL D EEDL  E+  L D FI  G+
Sbjct:  124 VTAAEVAIQYLFIKVHKPGKGCPGRQVVSMINDPMVNMSAEMTRILLPIEGRARSFIKDSYHLKEMLNEVVLEEGDCLGSFDIDCMYPSIPREAALEVIYRKLQKDRTLKDRTDLKPRQIITLLRVCMETHFKDIDGDIWTQTDGCPIGKSISGVIAGIYMADYEERHVLNNKQLPPKWRPKFWKRQKDDVIVVWPSGAEEFDNFRKEYLNTREERIQWSGEFEVDGKLNVLDMVCMRVGRGIRTKIYRKPTHTLKFASVRTNRPRKEALGSLKGLVNRAVRLTDSEEDLAEEIKLLSDAFIVEGF 429          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A2J7Q207_9NEOP (Reverse transcriptase domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q207_9NEOP)

HSP 1 Score: 239 bits (610), Expect = 3.740e-71
Identity = 118/293 (40.27%), Postives = 179/293 (61.09%), Query Frame = 1
Query:   31 LYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGYP 909
            LY L K+HK G P RP++S ID P Y + + L  ILNPL     SFVKNS      ++ + L ++  LV FDV +L+ ++PV++ L+++R +L  D + PER+P     ++ELL+ICL+T +   +   + Q +G  +G S+S  ++ I++  FEE  I  D  ++KP  W+R  DD F+IW +G E+LQ+ L H+N     I+FTME E N  L FLD+ + + G K+ T VYRK THT RYLH++SNHP   K GV+   I+RA  +C  ++D   E+  ++   + + YP
Sbjct:  105 LYGLPKIHKPGIPLRPIISSIDSPCYALAEFLHKILNPLSGNTGSFVKNSEHFIKSIQDINLQKEDCLVSFDVVSLFTNVPVEEVLQIIRDRLRMDSSFPERSPLQVEDVMELLDICLKTTYFQFEDTFYQQKEGMAMGNSLSPVVSNIFMEHFEE--IAIDTAEYKPAKWLRYVDDTFVIWPYGPEELQKFLQHINNIRPTIKFTMEVEVNNALPFLDVLVMKQGPKLTTKVYRKPTHTGRYLHFKSNHPHHVKRGVVHSLINRAKVICQNKKDFSKEIRNIRHDLMLSEYP 395          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A2J7QJN5_9NEOP (Reverse transcriptase domain-containing protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QJN5_9NEOP)

HSP 1 Score: 226 bits (577), Expect = 1.280e-65
Identity = 122/292 (41.78%), Postives = 168/292 (57.53%), Query Frame = 1
Query:   31 LYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGY 906
            LY L K+HK G P RP+VS I  P Y +   L  IL+PL     SFVKNS     +LK V L R   L  FDV +L+ ++PV +AL+V+R +L  D TL ER+      I+ELL++CL T +   D   + Q DG  +G S+S  ++ IY+  FE+  I  D  + KP+LW+R  DD F+IW HG E +Q  L+H+N     IQFTME E  G + FLD+ + + G  + T V+RK THT RYL++ SNHP   K G++     RA  +C   +D   E+  LK     +GY
Sbjct:  184 LYGLPKIHKPGIPLRPIVSSIGSPCYALAAFLQKILSPLAGRSGSFVKNSGHFIELLKSVNLRRHDMLASFDVVSLFTNVPVDEALQVIRSRLSNDNTLAERSVLKVEAIMELLDVCLRTTYFQGDDGFYQQKDGMAMGSSLSPVVSNIYMEHFEQLAI--DSAQDKPSLWLRYVDDTFVIWPHGAEGIQNFLTHLNSLRPAIQFTMEIESEGTIPFLDVLVMKKGTALTTKVHRKPTHTGRYLNFNSNHPPHVKRGIVHSLHDRATTICQDRQDRVLEVKSLKRDLQLSGY 473          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A7S3XWS7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWS7_HETAK)

HSP 1 Score: 205 bits (522), Expect = 1.180e-63
Identity = 97/123 (78.86%), Postives = 110/123 (89.43%), Query Frame = 1
Query:  286 LEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTME 654
            +E+VRQKLEE+ETL +RTPWSPAQI+EL EICLETHFKTI GRIF+Q  GTPIGKSISGPIAGIYLNWF+E+FIYS+RCK+KPTLW RMR     IWDHGEEKLQELL HVN QE+R+QFT+E
Sbjct:    1 MEIVRQKLEEEETLSQRTPWSPAQIIELWEICLETHFKTIYGRIFSQPGGTPIGKSISGPIAGIYLNWFDEEFIYSERCKNKPTLWKRMRG----IWDHGEEKLQELLGHVNEQEERVQFTIE 119          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A401QI04_SCYTO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI04_SCYTO)

HSP 1 Score: 213 bits (542), Expect = 2.190e-61
Identity = 114/294 (38.78%), Postives = 171/294 (58.16%), Query Frame = 1
Query:   28 KLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVT-SVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGY 906
            +LY L K+HK+G P RP+VS I  P+Y + K +   L P  E   S++KNS    +MLK + LN+   LV FDV +L+  IP+++ ++++ ++ +              ++ EL ++CL T +   DG  + Q +G  +G  +S   A +YL+ FEE+ I S   K  PT W R  DD F+IW HG +KL+E L H+N     I+FTME E+NG + FLD+ ++R  E  ++ +VYRK THT RYLH  S+H  K K G++    HR+  + D++  LR EL  L+    SNGY
Sbjct:  152 RLYGLPKIHKEGTPYRPIVSAIGSPSYKLAKYVARELQPTVERAASYIKNSRHFIDMLKRITLNKTDLLVSFDVVSLFTKIPIQETIKIIEEQFDR-------------RLAELAKVCLTTTYFKFDGEFYQQKEGAAMGSPVSPAAANLYLSSFEEEAINSSTLK--PTHWYRYIDDTFVIWPHGRQKLEEFLGHLNSIHPNIKFTMEIEENGQIPFLDVLVKRNAEGTLSHTVYRKTTHTDRYLHAESHHHPKQKRGILHTLAHRSKTISDKQH-LREELQHLQQALASNGY 429          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: A0A1B6JB38_9HEMI (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JB38_9HEMI)

HSP 1 Score: 209 bits (531), Expect = 6.520e-61
Identity = 112/303 (36.96%), Postives = 177/303 (58.42%), Query Frame = 1
Query:    1 LTMTAPEMAKLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGYP 909
            LT    ++  +Y L K+HK   P RP++S  D P   + KVL DIL PL     SF+KNS +     K ++L    +LV FDV++L+ ++PV + L +++ +L+ED+TL +RT      I+ELLE+C + ++  ++G+I+ Q +G  +G  +S   A I++  FE + + S   + KP +W R  DD F+I+ HG+ +L   L+H+N     I+ TME E    L FLD+ + R  + + T+V+RK THT +YL+++SNH K  K GV      RA  LC  ++ L+ E   ++    SNGYP
Sbjct:   48 LTPHHSKIPHMYGLPKIHKPTIPLRPIISSRDSPCRELSKVLLDILTPLVGKTDSFIKNSRDFVEKSKSLKLTETDKLVSFDVESLFTNVPVPETLGIIKSRLKEDQTLKDRTKLPVPVIMELLELCTQCNYFELEGKIYRQDEGMAMGSPLSPIFANIFMEEFERKALAS--AQFKPKIWWRYVDDTFVIFSHGDIELNNFLNHINSISPSIRLTMEVEVQNKLPFLDVCVLRDRDVLKTTVFRKITHTGKYLNYQSNHQKSVKEGVAYSLFDRAKSLCSDKDGLKEEFKKIESDLRSNGYP 348          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: UPI001455459E (uncharacterized protein LOC117300272 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455459E)

HSP 1 Score: 202 bits (515), Expect = 2.620e-59
Identity = 120/289 (41.52%), Postives = 170/289 (58.82%), Query Frame = 1
Query:   46 KVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLE-THFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGE-KVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGY 906
            K+HK   P RP+VS    PTYN+ + LT +L+ L       V NS    +++KG+ L     LV FDVK+L+ ++P  +A ++ +  LE+DETL +RT  +P QI +LL  C++ T+F+  DG  + Q+  TP+G  IS  +A I++  FE++ + + R K  P LW+R  DD FIIW HG E   + LSH+N Q   IQFTME E +  L FLD+ + +  +  +  SVYRK THT RYL+ RS HP   K  V +  + RAH +CD+E  L  EL  L      NGY
Sbjct:   34 KIHKPDKPLRPIVSSRGSPTYNLAQHLTKLLHTLVGKTPHHVPNSAGFIDIIKGIELQSSDILVSFDVKSLFTNVPTDEACQITKAVLEQDETLTDRTSLTPDQIHDLLMTCVKSTYFQWRDG-YYRQALRTPMGSPISPVLANIFMEDFEQKALGTARLK--PKLWLRYVDDTFIIWSHGLENHDDFLSHINRQHPNIQFTMETETSDSLPFLDVLISKKTDGSLAHSVYRKPTHTDRYLNARSFHPPSVKASVNRTLLQRAHIICDKEH-LPNELEHLNTVLKENGY 318          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: UPI001C91F7F2 (uncharacterized protein LOC122370714 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91F7F2)

HSP 1 Score: 204 bits (520), Expect = 4.500e-59
Identity = 113/294 (38.44%), Postives = 168/294 (57.14%), Query Frame = 1
Query:   28 KLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGYP 909
            ++Y L K+HK+G P RP+ S I  P Y I   LT I++P        V NS    + LK + LN    ++ FDV +L+  +PV++A++V+  KL ED+TL ER+      I +L+  CLE  +    G  + Q +G P+G S+S  +A  Y+   E+  + S   K  PTLW R  DD FI+W HG+E LQE    +N     IQFT+ERE +  L FLD+ ++R   ++ TSVYRK T +  YL + S+HP   K G+++C   RA R+C     ++ E   ++D F++NGYP
Sbjct:   18 RMYGLPKIHKEGVPLRPITSMIGSPAYGIAAYLTKIISPALGKTEYTVPNSSSFVDELKQLDLNGSEEMMSFDVVSLFTRVPVQEAVDVICDKLAEDDTLFERSEIGVDSIRKLMLACLECRYFLCLGAFYEQKEGAPMGLSLSVVLANAYMEHLEQSILTSATLK--PTLWRRYVDDTFILWPHGDEALQEFHQRLNDFCPSIQFTLEREVDQKLPFLDVLVQRSEGRLGTSVYRKATASNVYLKYNSSHPAAMKAGLIRCMEARARRVCSDMSSVKEEKSKIRDVFVANGYP 309          
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Match: UPI001BB2C68D (uncharacterized protein LOC121430263 n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2C68D)

HSP 1 Score: 210 bits (535), Expect = 5.360e-59
Identity = 116/301 (38.54%), Postives = 172/301 (57.14%), Query Frame = 1
Query:   10 TAPEMAKLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEGGRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQKLEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSISGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQELLSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGE-KVVTSVYRKDTHTFRYLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGYP 909
            T  +  ++Y L K+HK   P RP+VS I    YN  K+L DIL PL    +  V+NS    + L+   +     +V FDV +L+ ++PV+ A +V  Q+LE D +LP+RT  SP Q+ ELL   L++ +   DGR + Q +G  +G  +S  IA +Y+  FEE  +++   +  P +W R  DD FI+ D        LL++VN Q+  I+FTMERE N  +AFLD  + R  E ++ T+VYRK THT +YL + S+HP+  K GV+KC   RA R+  + +    E   +    +SNGYP
Sbjct:  166 TQKQPPRIYGLPKIHKPDVPLRPIVSCISSFAYNTSKLLADILAPLVGNNQHAVRNSASFVDFLRNQTVLEHEVMVSFDVVSLFTNVPVEAACDVALQRLEADASLPDRTDLSPTQVTELLRFVLKSTYFMYDGRFYEQQEGAAMGSPVSAVIANLYMESFEEDALHACPPEFSPRIWKRYVDDTFIVTDRSTTDC--LLNYVNAQQPSIRFTMEREDNNRIAFLDTLVHRDDEGRLTTTVYRKPTHTDQYLAYDSHHPQSVKRGVVKCLYDRASRIVSKPQCTAAEKQRIASALVSNGYP 464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1032.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1V4J2_HETAK4.760e-22098.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4DDA1_HETAK3.460e-8046.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2J7Q207_9NEOP3.740e-7140.27Reverse transcriptase domain-containing protein n=... [more]
A0A2J7QJN5_9NEOP1.280e-6541.78Reverse transcriptase domain-containing protein n=... [more]
A0A7S3XWS7_HETAK1.180e-6378.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A401QI04_SCYTO2.190e-6138.78Reverse transcriptase domain-containing protein (F... [more]
A0A1B6JB38_9HEMI6.520e-6136.96Reverse transcriptase domain-containing protein (F... [more]
UPI001455459E2.620e-5941.52uncharacterized protein LOC117300272 n=1 Tax=Aster... [more]
UPI001C91F7F24.500e-5938.44uncharacterized protein LOC122370714 n=1 Tax=Amphi... [more]
UPI001BB2C68D5.360e-5938.54uncharacterized protein LOC121430263 n=3 Tax=Lytec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1032contigH-akashiwo_Contig1032:265063..265971 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog28377.ENSACAP00000021976
PFAMsRVT_1
Model size909
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.69e-52
EggNOG OGs2CN36@1|root,2QTNN@2759|Eukaryota,38FJC@33154|Opisthokonta,3BM27@33208|Metazoa,3D0HQ@33213|Bilateria,48H4M@7711|Chordata,49D09@7742|Vertebrata
Cds size903
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387057.3562324-UTR-H-akashiwo_Contig1032:265062..2650681681387057.3562324-UTR-H-akashiwo_Contig1032:265062..265068Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1032 265063..265068 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387057.3698602-CDS-H-akashiwo_Contig1032:265068..2659711681387057.3698602-CDS-H-akashiwo_Contig1032:265068..265971Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1032 265069..265971 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1032.6.1prot_H-akashiwo_Contig1032.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1032 265069..265971 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1032.6.1

>prot_H-akashiwo_Contig1032.6.1 ID=prot_H-akashiwo_Contig1032.6.1|Name=mRNA_H-akashiwo_Contig1032.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=301bp
MTAPEMAKLYLLIKVHKDGYPGRPVVSQIDDPTYNICKVLTDILNPLDEG
GRSFVKNSFELKNMLKGVRLNRDSRLVFFDVKALYPSIPVKKALEVVRQK
LEEDETLPERTPWSPAQIVELLEICLETHFKTIDGRIFTQSDGTPIGKSI
SGPIAGIYLNWFEEQFIYSDRCKHKPTLWVRMRDDVFIIWDHGEEKLQEL
LSHVNGQEKRIQFTMEREKNGVLAFLDLKMERVGEKVVTSVYRKDTHTFR
YLHWRSNHPKKTKLGVMKCPIHRAHRLCDREEDLRWELGFLKDQFISNGY
P
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mRNA from alignment at H-akashiwo_Contig1032:265063..265971+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1032.6.1 ID=mRNA_H-akashiwo_Contig1032.6.1|Name=mRNA_H-akashiwo_Contig1032.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=909bp|location=Sequence derived from alignment at H-akashiwo_Contig1032:265063..265971+ (Heterosigma akashiwo CCMP452)
CTTACAATGACGGCTCCTGAGATGGCAAAGTTATACCTACTCATCAAGGT GCACAAGGATGGCTATCCTGGGAGGCCTGTTGTGAGTCAGATTGATGACC CTACCTACAACATCTGCAAGGTTCTTACAGACATACTGAATCCACTGGAC GAGGGGGGGCGTTCCTTCGTCAAAAACTCTTTTGAGCTGAAGAATATGCT CAAGGGGGTGAGGTTGAACAGGGACTCCAGGCTGGTCTTTTTTGACGTGA AGGCGCTGTATCCTTCCATTCCAGTGAAGAAGGCTTTGGAGGTGGTGAGG CAGAAGCTAGAGGAGGATGAGACTCTACCTGAACGGACGCCATGGAGCCC AGCGCAGATTGTGGAGTTGTTGGAGATTTGCCTTGAAACTCATTTCAAGA CAATTGATGGGCGGATCTTCACGCAGTCTGATGGGACTCCTATCGGCAAG TCCATCTCCGGTCCCATTGCAGGTATATATTTGAACTGGTTCGAAGAACA GTTCATCTATAGTGACAGGTGCAAGCACAAGCCCACCCTGTGGGTGAGGA TGAGGGATGATGTGTTCATCATTTGGGACCATGGGGAGGAGAAGCTACAG GAGCTGTTGAGCCATGTGAATGGCCAGGAGAAGCGGATCCAATTCACGAT GGAGAGAGAGAAGAACGGGGTGCTTGCTTTTCTGGACCTGAAGATGGAGA GGGTGGGGGAGAAGGTGGTGACCAGCGTGTATCGGAAGGACACGCACACC TTTCGGTACCTGCATTGGAGGTCAAATCATCCCAAGAAGACCAAGCTGGG GGTGATGAAGTGCCCCATCCATCGAGCCCATCGGCTGTGCGACCGAGAGG AGGATCTGAGGTGGGAGCTGGGTTTTCTCAAGGACCAGTTCATCTCAAAT GGATACCCT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1032:265063..265971+

>mRNA_H-akashiwo_Contig1032.6.1 ID=mRNA_H-akashiwo_Contig1032.6.1|Name=mRNA_H-akashiwo_Contig1032.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=903bp|location=Sequence derived from alignment at H-akashiwo_Contig1032:265063..265971+ (Heterosigma akashiwo CCMP452)
ATGACGGCTCCTGAGATGGCAAAGTTATACCTACTCATCAAGGTGCACAA
GGATGGCTATCCTGGGAGGCCTGTTGTGAGTCAGATTGATGACCCTACCT
ACAACATCTGCAAGGTTCTTACAGACATACTGAATCCACTGGACGAGGGG
GGGCGTTCCTTCGTCAAAAACTCTTTTGAGCTGAAGAATATGCTCAAGGG
GGTGAGGTTGAACAGGGACTCCAGGCTGGTCTTTTTTGACGTGAAGGCGC
TGTATCCTTCCATTCCAGTGAAGAAGGCTTTGGAGGTGGTGAGGCAGAAG
CTAGAGGAGGATGAGACTCTACCTGAACGGACGCCATGGAGCCCAGCGCA
GATTGTGGAGTTGTTGGAGATTTGCCTTGAAACTCATTTCAAGACAATTG
ATGGGCGGATCTTCACGCAGTCTGATGGGACTCCTATCGGCAAGTCCATC
TCCGGTCCCATTGCAGGTATATATTTGAACTGGTTCGAAGAACAGTTCAT
CTATAGTGACAGGTGCAAGCACAAGCCCACCCTGTGGGTGAGGATGAGGG
ATGATGTGTTCATCATTTGGGACCATGGGGAGGAGAAGCTACAGGAGCTG
TTGAGCCATGTGAATGGCCAGGAGAAGCGGATCCAATTCACGATGGAGAG
AGAGAAGAACGGGGTGCTTGCTTTTCTGGACCTGAAGATGGAGAGGGTGG
GGGAGAAGGTGGTGACCAGCGTGTATCGGAAGGACACGCACACCTTTCGG
TACCTGCATTGGAGGTCAAATCATCCCAAGAAGACCAAGCTGGGGGTGAT
GAAGTGCCCCATCCATCGAGCCCATCGGCTGTGCGACCGAGAGGAGGATC
TGAGGTGGGAGCTGGGTTTTCTCAAGGACCAGTTCATCTCAAATGGATAC
CCT
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