mRNA_H-akashiwo_Contig103.13.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 594 bits (1532), Expect = 8.700e-214 Identity = 294/296 (99.32%), Postives = 295/296 (99.66%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 888 GSSQA+VSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL EMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN Sbjct: 44 GSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 339
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 280 bits (716), Expect = 5.430e-91 Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 417 GSSQAIVSEFKQSLASKY+LTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL Sbjct: 130 GSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 241 bits (615), Expect = 2.870e-69 Identity = 123/297 (41.41%), Postives = 185/297 (62.29%), Query Frame = 1 Query: 4 SSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELS--DANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAAN 888 S ++ +S K++++ Y+++D GE+ ILGIKV RD+ + LSQ SFI++A KF + P++ +D+ LS +A +RS+VGT+ W+A WT PE+A+++H L + +P A RYL T+ + + LGG L L A++D+DFC++R G+S +G+ +FLG +PI+WSS++Q VT +T EAEY++LR+AV D+MWL+ LL +G Q P+ EDN AC+ WAND V+K RH HVSYH KE V I + Y+ T Q+AD+ TK L+ N Sbjct: 690 SDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNN 985
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 197 bits (501), Expect = 2.710e-56 Identity = 111/297 (37.37%), Postives = 166/297 (55.89%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPT--PGFKAELSDANL--YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 GSS ++SE+K+ + KY LTD GE++ +LGIKV RD+ + LSQ ++I LA+F L P+D + LT + P A+++ YR +G+L + A TRP+++F + L + NP H+EAV+R FRYL GT++ L+ GG L + D+D + ++TGY+ + + WSSK Q VT ST EAEY+A A K+ MW+R LL E+ P PT + D+ + + D + R +H + YH + V GT+R+ Y T+D AD LTKAL Sbjct: 152 GSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQE-HRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRLIYCPTNDMTADTLTKAL 447
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A2I0XAK1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XAK1_9ASPA) HSP 1 Score: 199 bits (507), Expect = 7.570e-55 Identity = 113/296 (38.18%), Postives = 174/296 (58.78%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDAN--LYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL-GGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALN 879 G+ Q + + Q+L S++++ D G+L+Q LGI+V HLSQ F + L + G+ TP + T +A L+ AN LYR + G+L ++ TRP+++F V+K+ + NP HFE+++R RY+ GT L L GGDL LR+++D+D+ D D KS+TGY FLG + I WS K Q AV S+ EAEY AL +A ++ W+R LL E+ CPQH PTP+ DN++ + AN+ + + R +H V H + + +I++ +I T DQ+AD+ TK L+ Sbjct: 498 GNCQQAIKQLLQTLNSRFTMKDLGQLSQFLGIQVTHTPSG--LHLSQGHFAQTILHRAGMLNCKPVSTPSQIKNNSTN----QASLAFANPSLYRQLAGSLQYLT-LTRPDISFAVNKVCQHMQNPTNLHFESLKRLLRYIHGTLHVGLPLSGGDLTLRSYADADWAGDTSDRKSITGYCNFLGHSLISWSVKKQNAVARSSTEAEYRALAAAAAEVTWIRRLLHELDCPQHSPTPLYCDNTSAIALANNPVFHARTKHIDVDCHYIRNCIKENSIQVHHISTKDQIADLFTKPLH 786
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.220e-53 Identity = 102/297 (34.34%), Postives = 165/297 (55.56%), Query Frame = 1 Query: 10 QAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANL----YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDL--VLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNA 882 +A+++ K +A K+ + D G ILGI++ D + +S ++ + + KFG + C TPL+ V LT + E A + YRS+VG+L ++A TRP+++ V KL R NP KH++A + RYL T+ + G L L A+SD+D+ +R D +SV+G +L L AP+VW S Q V S+ EAEY+AL VK+ +W+R LL ++G Q T + EDN + A ++ R +H + YH +E+V + + Y+ T++Q+AD +TK L++ Sbjct: 8 KAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISHKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELQYVDTNNQLADFMTKCLSS 304
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 197 bits (502), Expect = 1.690e-53 Identity = 111/297 (37.37%), Postives = 166/297 (55.89%), Query Frame = 1 Query: 1 GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPT--PGFKAELSDANL--YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 GSS ++SE+K+ + KY LTD GE++ +LGIKV RD+ + LSQ ++I LA+F L P+D + LT + P A+++ YR +G+L + A TRP+++F + L + NP H+EAV+R FRYL GT++ L+ GG L + D+D + ++TGY+ + + WSSK Q VT ST EAEY+A A K+ MW+R LL E+ P PT + D+ + + D + R +H + YH + V GT+R+ Y T+D AD LTKAL Sbjct: 1169 GSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQE-HRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRQLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRLIYCPTNDMTADTLTKAL 1464
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A6A4DK21_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DK21_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.910e-53 Identity = 105/294 (35.71%), Postives = 162/294 (55.10%), Query Frame = 1 Query: 13 AIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPT--PGFKAELS--DANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 A ++ K + + L D G + ILGI+V D +K L Q +I D + +F TP+D ++ +T P +AE++ +RS++G+L+++A TRP++A V +L R NP +H++A + RYLKGT++ + G + L A+SD+D+ +DR D +SV+G +L L AP+VW + Q V ST E EY+AL VK+ MW R LL +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 2 ATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIADKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQAEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFDGKMPPELIAYSDADWGSDRDDRRSVSGTVLMLFSAPVVWKTGFQKTVALSTTETEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 295
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 187 bits (475), Expect = 4.410e-53 Identity = 105/294 (35.71%), Postives = 160/294 (54.42%), Query Frame = 1 Query: 13 AIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLT----PTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLV--LRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKAL 876 A ++ K + + L D G + ILGI+V D K L Q +I D + +F TP+D ++ +T P + + +RS++G+L+++A TRP++A V +L R NP +H++A + RYLKGT++ + GG + L A+SD+D+ +DR D +SV+G +L L AP+VW + Q V ST EAEY+AL VK+ MW R LL +G Q T + EDN + A + R +H + YH +E++ G I + YI T +QVAD LTK L Sbjct: 82 ATINTVKDKIRHSFKLKDLGAVRYILGIEVHHDIAEKTLMLRQPRYIDDLVQRFNQTEAHPSVTPIDLSLPVTKEDQPETQEEMTIMRGKPFRSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Match: A0A409X0Q5_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409X0Q5_9AGAR) HSP 1 Score: 192 bits (489), Expect = 6.220e-53 Identity = 111/297 (37.37%), Postives = 177/297 (59.60%), Query Frame = 1 Query: 4 SSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFG-LDYLPACKTPLDHTVDLT-PTPGFKAELSDANL-YRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALN 879 S++A ++EFK+ + SK+ +TD GE I+GI + RD+ N+ +LSQT+ I ++FG D LPA TP+D + LT P G + L YRS++G + ++A TRP+++F + L + + H+ A R RYLKGT+S L LGGD + L ++DSD+ + KSV+GY LGD I W ++ Q V+TS+ EAEY+A A K+ +WLR++L+E+ + +P + DN+A + + D ++ R +H + YH +++V + + I T D +ADI TKAL+ Sbjct: 358 STKAALAEFKEEMRSKWQVTDLGEPKHIVGIGIHRDRPNRKIYLSQTALIDRLTSQFGQTDALPA-STPMDPGLKLTVPAKGSVDRTITSKLPYRSLIGAMLYIAVGTRPDISFAIQNLSQFLDTYDQSHWNAAIRVLRYLKGTRSLRLALGGDNGISLLGYTDSDWSQCINNRKSVSGYGFTLGDGLISWCARKQRTVSTSSCEAEYIAAFEATKEALWLRNILSELDLIKPDPVRIECDNTAAIRLSEDPSLHARVKHIDIKYHFIRDRVQKKQVFLHQIGTKDNIADIFTKALD 653 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig103.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig103.13.1 >prot_H-akashiwo_Contig103.13.1 ID=prot_H-akashiwo_Contig103.13.1|Name=mRNA_H-akashiwo_Contig103.13.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=296bp GSSQAIVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFback to top mRNA from alignment at H-akashiwo_Contig103:1042912..1043799+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig103.13.1 ID=mRNA_H-akashiwo_Contig103.13.1|Name=mRNA_H-akashiwo_Contig103.13.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig103:1042912..1043799+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig103:1042912..1043799+ >mRNA_H-akashiwo_Contig103.13.1 ID=mRNA_H-akashiwo_Contig103.13.1|Name=mRNA_H-akashiwo_Contig103.13.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=888bp|location=Sequence derived from alignment at H-akashiwo_Contig103:1042912..1043799+ (Heterosigma akashiwo CCMP452)back to top |