mRNA_H-akashiwo_Contig103.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A6V1UTP1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UTP1_HETAK) HSP 1 Score: 241 bits (616), Expect = 1.110e-72 Identity = 140/163 (85.89%), Postives = 142/163 (87.12%), Query Frame = 2 Query: 2 GATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARCSRR--PVLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSPLTPQEEYVLS 472 GATLAQVEAAAREANAHDFIMSFPDGYATKVG G SGG +AR + PVLVL EATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSPLTPQEEYVLS Sbjct: 545 GATLAQVEAAAREANAHDFIMSFPDGYATKVGEG----GVQLSGGQRQRVAIARALLKDAPVLVLDEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSPLTPQEEYVLS 703
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A835ZKR2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKR2_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.110e-36 Identity = 89/144 (61.81%), Postives = 106/144 (73.61%), Query Frame = 2 Query: 2 GATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARCSRRP--VLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQ 415 GAT+ +V AAA++ANAHDFIM FP GY T VG GA SGG +AR + +LVL EATSALDA+SEALVQ+ALERLM GRTVLV+AHRLSTVV+ADKI V+ G VLEEG+H EL+ RG GAY +LM+TQ + Sbjct: 439 GATMEEVIAAAKQANAHDFIMQFPQGYDTPVGEG----GAQLSGGQRQRVAIARAILKDARILVLDEATSALDAQSEALVQEALERLMQGRTVLVIAHRLSTVVSADKICVIGSGMVLEEGSHKELVMRG--GAYTELMKTQVK 576
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A519QBC0_9CAUL (ATP-binding cassette domain-containing protein (Fragment) n=2 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A519QBC0_9CAUL) HSP 1 Score: 131 bits (329), Expect = 3.520e-34 Identity = 83/151 (54.97%), Postives = 101/151 (66.89%), Query Frame = 2 Query: 2 GATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARC--SRRPVLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRT 436 GAT +EAAAR+A AHDFI + P+GYAT+ G A G SGG +AR P+L+L EATSALD ESEALVQ ALERLMAGR L++AHRLSTV NAD+I VL+GG+++E+GTH EL +GG Y +L R Q G T Sbjct: 123 GATQDDIEAAARDAAAHDFISALPEGYATRAGEA----GLRLSGGQRQRIAIARAFLKNAPILLLDEATSALDTESEALVQAALERLMAGRATLMIAHRLSTVQNADRIHVLEGGRIVEQGTHAELSR--QGGLYARLARQQALGAATVET 267
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A7I9VPF2_9DELT (ABC transporter permease n=1 Tax=Anaeromyxobacter sp. Red267 TaxID=2590199 RepID=A0A7I9VPF2_9DELT) HSP 1 Score: 130 bits (327), Expect = 8.690e-32 Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 2 Query: 5 ATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGHGVARC--SRRPVLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSPLTPQ 454 AT ++E AAR ANAHDF+ P GY T VG A + A +AR R +L+L E TSALDAESEALVQ+AL+R+MAGRT +AHRLSTVVNAD+I+VL+ G++ E+G+H ELM RG G Y +L+ QT+GL+A P+ Sbjct: 447 ATREEIEEAARLANAHDFVSRLPQGYDTVVGERGARLSAGERQRIAIARALLKRPAILILDEPTSALDAESEALVQEALDRVMAGRTTFSIAHRLSTVVNADRILVLRDGRIAEQGSHAELMARG--GEYARLVLKQTRGLLAPAPERAAPR 596
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A2T6E082_9BACT (ABC transporter n=1 Tax=Opitutaceae bacterium EW11 TaxID=2161865 RepID=A0A2T6E082_9BACT) HSP 1 Score: 130 bits (327), Expect = 8.880e-32 Identity = 82/156 (52.56%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 5 ATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGHGVARCSRRP--VLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSPLT-PQEEY 463 ATLAQVEAAAR ANAHDFI P+GY T VG + +AR + +++L EATS+LDAESE LVQ+ALERLM RT V+AHRLSTVVNAD+I+VLK G++ E G H ELM+ G Y L++ QT+G++ T L P EY Sbjct: 455 ATLAQVEAAARAANAHDFICRMPEGYETIVGERGGRLSVGERQRLTIARAIIKDPRIIILDEATSSLDAESEGLVQEALERLMRDRTTFVIAHRLSTVVNADQIIVLKDGRIAERGNHRELMKLD--GYYASLVKRQTRGMIENDTEALRMPAREY 608
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A7S0G0E2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0G0E2_9DINO) HSP 1 Score: 121 bits (303), Expect = 1.150e-31 Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 2 Query: 5 ATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARCSRR--PVLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQ 409 AT A+VE AAR ANAHDFI + PDGY T VG G+ SGG +AR + P+L+L EATSALDAESEA VQ AL+RLM GRT L++AHRL+TV AD+I+V+ G+VLE G H LMER GAY +L+ +Q Sbjct: 10 ATDAEVEEAARAANAHDFISALPDGYGTDVGER----GSRLSGGQRQRVAIARAILKDAPILILDEATSALDAESEAAVQSALDRLMHGRTTLIIAHRLATVQRADQIIVMGEGRVLESGRHEALMERH--GAYERLVNSQ 144
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A6H5J855_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J855_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.170e-31 Identity = 82/144 (56.94%), Postives = 96/144 (66.67%), Query Frame = 2 Query: 2 GATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARCSRRP--VLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQ 415 G T+ +V AA ANA DFI FPDG+ T VG G SGG +AR + +L+L EATSALDA SEALVQ+AL RL GRTVLV+AHRLSTVVNADKI VL G+V+EEG H EL+ER GAY+ LM TQ + Sbjct: 69 GVTMDKVVQAAELANAKDFIEEFPDGFETFVGEG----GVQLSGGQRQRIAIARAVLKDARILILDEATSALDAHSEALVQEALSRLTKGRTVLVIAHRLSTVVNADKICVLSQGKVIEEGKHDELLERE--GAYYNLMSTQVR 206
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: B9XGQ5_PEDPL (ABC transporter related-protein n=1 Tax=Pedosphaera parvula (strain Ellin514) TaxID=320771 RepID=B9XGQ5_PEDPL) HSP 1 Score: 129 bits (325), Expect = 1.470e-31 Identity = 79/142 (55.63%), Postives = 99/142 (69.72%), Query Frame = 2 Query: 5 ATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGHGVARC--SRRPVLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLV 424 A+LA++EAAA+ ANAHDFI P+GY T VG + + +AR P+LVL EATS+LDAESEALVQ+AL RLM RT V+AHRLSTVVNA++I+VLK G V+E GTH ELM+ G G Y L++ QT GL+ Sbjct: 434 ASLAEIEAAAKAANAHDFISHLPEGYETMVGERGSRLSVGERQRITIARALIKNPPILVLDEATSSLDAESEALVQEALNRLMKERTTFVIAHRLSTVVNANRIIVLKHGLVVESGTHAELMKLG--GYYAALVKRQTGGLI 573
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A2W6CHM1_9CHLR (ABC transporter domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W6CHM1_9CHLR) HSP 1 Score: 125 bits (314), Expect = 1.510e-31 Identity = 83/151 (54.97%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 14 AQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARCSRRP--VLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSPLT 448 A++EAAA EANAH FI +FPDGYA+ +G G SGG +AR R +L+L EAT+ LD ESE LVQQALERLM GRT LV+AHRLSTV ADKI+VL GQ++EEG+HTELME +GG Y L T+ L T +T Sbjct: 164 AEIEAAACEANAHQFITAFPDGYASTIGER----GVKLSGGERQRIAIARAILRDPRILILDEATNNLDNESERLVQQALERLMKGRTTLVIAHRLSTVHKADKILVLNNGQIVEEGSHTELME--QGGFYHHLY---TRNLAKEATEAIT 305
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Match: A0A261U0L9_9BORD (Multidrug ABC transporter ATP-binding protein n=2 Tax=Bordetella genomosp. 4 TaxID=463044 RepID=A0A261U0L9_9BORD) HSP 1 Score: 129 bits (325), Expect = 1.810e-31 Identity = 80/152 (52.63%), Postives = 104/152 (68.42%), Query Frame = 2 Query: 5 ATLAQVEAAAREANAHDFIMSFPDGYATKVGRAAAAVGASGSGGH----GVARC--SRRPVLVLGEATSALDAESEALVQQALERLMAGRTVLVVAHRLSTVVNADKIVVLKGGQVLEEGTHTELMERGEGGAYWQLMRTQTQGLVAGRTSP 442 AT A++E AAR+A+AHDFIM+ P GY T VG G SGG +AR + P+L+L EATS+LD+ESEAL+QQA+ERLMAGRT LVVAHRLST+ D+++V+ G+++EEG H LM+R EGG Y +L+ Q L G T P Sbjct: 456 ATRAEIEHAARQASAHDFIMALPKGYETMVGER----GVKLSGGERQRVALARAFLANAPILILDEATSSLDSESEALIQQAMERLMAGRTTLVVAHRLSTIRTMDRLLVMDKGRIVEEGNHHTLMQR-EGGLYRRLLERQALELTKGLTLP 602 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig103.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig103.10.1 >prot_H-akashiwo_Contig103.10.1 ID=prot_H-akashiwo_Contig103.10.1|Name=mRNA_H-akashiwo_Contig103.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=138bp MSFPDGYATKVGRAAAAVGASGSGGHGVARCSRRPVLVLGEATSALDAESback to top mRNA from alignment at H-akashiwo_Contig103:859506..864485+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig103.10.1 ID=mRNA_H-akashiwo_Contig103.10.1|Name=mRNA_H-akashiwo_Contig103.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=4980bp|location=Sequence derived from alignment at H-akashiwo_Contig103:859506..864485+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig103:859506..864485+ >mRNA_H-akashiwo_Contig103.10.1 ID=mRNA_H-akashiwo_Contig103.10.1|Name=mRNA_H-akashiwo_Contig103.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=414bp|location=Sequence derived from alignment at H-akashiwo_Contig103:859506..864485+ (Heterosigma akashiwo CCMP452)back to top |